RNA–Protein interactions for RNA: ENST00000552275.1

ATP2B1-210, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-210ENST00000552275 MFSD10Q14728 455 aa12.55□□□□□ -0.4
ATP2B1-210ENST00000552275 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
ATP2B1-210ENST00000552275 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
ATP2B1-210ENST00000552275 IER5LQ5T953 404 aa12.52□□□□□ -0.41
ATP2B1-210ENST00000552275 LMOD2Q6P5Q4 547 aa12.52□□□□□ -0.41
ATP2B1-210ENST00000552275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.41
ATP2B1-210ENST00000552275 SCUBE2Q9NQ36 999 aa12.52□□□□□ -0.41
ATP2B1-210ENST00000552275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATP2B1-210ENST00000552275 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
ATP2B1-210ENST00000552275 TULP1O00294 542 aaPredicted RBP12.48□□□□□ -0.41
ATP2B1-210ENST00000552275 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
ATP2B1-210ENST00000552275 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
ATP2B1-210ENST00000552275 SEMA3EO15041 775 aa12.44□□□□□ -0.42
ATP2B1-210ENST00000552275 CAMK2BQ13554 666 aa12.44□□□□□ -0.42
ATP2B1-210ENST00000552275 PLCG2P16885 1265 aa12.43□□□□□ -0.42
ATP2B1-210ENST00000552275 GPHNQ9NQX3 736 aaPredicted RBP12.4□□□□□ -0.42
ATP2B1-210ENST00000552275 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
ATP2B1-210ENST00000552275 IRX5P78411 483 aaPredicted RBP12.38□□□□□ -0.43
ATP2B1-210ENST00000552275 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
ATP2B1-210ENST00000552275 PPP1R15BQ5SWA1 713 aa12.37□□□□□ -0.43
ATP2B1-210ENST00000552275 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
ATP2B1-210ENST00000552275 POTEMA6NI47 508 aa12.36□□□□□ -0.43
ATP2B1-210ENST00000552275 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
ATP2B1-210ENST00000552275 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
ATP2B1-210ENST00000552275 SMYD5Q6GMV2 418 aa12.34□□□□□ -0.43
ATP2B1-210ENST00000552275 POTEGQ6S5H5 508 aa12.34□□□□□ -0.43
ATP2B1-210ENST00000552275 ZC3H15Q8WU90 426 aaKnown RBP12.33□□□□□ -0.44
ATP2B1-210ENST00000552275 DSG2Q14126 1118 aa12.3□□□□□ -0.44
ATP2B1-210ENST00000552275 SLAIN1Q8ND83 568 aa12.3□□□□□ -0.44
ATP2B1-210ENST00000552275 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
ATP2B1-210ENST00000552275 TMEM121BQ9BXQ6 578 aaPredicted RBP12.29□□□□□ -0.44
ATP2B1-210ENST00000552275 PLSCR2Q9NRY7 297 aa12.28□□□□□ -0.44
ATP2B1-210ENST00000552275 FOXK1P85037 733 aa12.27□□□□□ -0.45
ATP2B1-210ENST00000552275 BOLA1Q9Y3E2 137 aa12.27□□□□□ -0.45
ATP2B1-210ENST00000552275 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
ATP2B1-210ENST00000552275 LCE2DQ5TA82 110 aaPredicted RBP12.24□□□□□ -0.45
ATP2B1-210ENST00000552275 G3V3G9 751 aa12.23□□□□□ -0.45
ATP2B1-210ENST00000552275 DPYSL4O14531 572 aa12.23□□□□□ -0.45
ATP2B1-210ENST00000552275 SPDYE16A6NNV3 312 aaPredicted RBP12.22□□□□□ -0.45
ATP2B1-210ENST00000552275 KIF3CO14782 793 aa12.22□□□□□ -0.45
ATP2B1-210ENST00000552275 C2orf72A6NCS6 295 aa12.21□□□□□ -0.45
ATP2B1-210ENST00000552275 ZMYND10O75800 440 aa12.21□□□□□ -0.45
ATP2B1-210ENST00000552275 MLLT3P42568 568 aaPredicted RBP12.21□□□□□ -0.45
ATP2B1-210ENST00000552275 PDIA6Q15084 440 aa12.21□□□□□ -0.45
ATP2B1-210ENST00000552275 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
ATP2B1-210ENST00000552275 TMEM132AQ24JP5 1023 aa12.2□□□□□ -0.46
ATP2B1-210ENST00000552275 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
ATP2B1-210ENST00000552275 L3MBTL3Q96JM7 780 aaPredicted RBP12.19□□□□□ -0.46
ATP2B1-210ENST00000552275 SLC24A3Q9HC58 644 aa12.18□□□□□ -0.46
ATP2B1-210ENST00000552275 BRPF1P55201 1214 aaPredicted RBP12.17□□□□□ -0.46
ATP2B1-210ENST00000552275 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
ATP2B1-210ENST00000552275 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
ATP2B1-210ENST00000552275 GPIHBP1Q8IV16 184 aa12.14□□□□□ -0.47
ATP2B1-210ENST00000552275 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
ATP2B1-210ENST00000552275 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
ATP2B1-210ENST00000552275 ST18O60284 1047 aa12.12□□□□□ -0.47
ATP2B1-210ENST00000552275 TMEM92Q6UXU6 159 aa12.1□□□□□ -0.47
ATP2B1-210ENST00000552275 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
ATP2B1-210ENST00000552275 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
ATP2B1-210ENST00000552275 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
ATP2B1-210ENST00000552275 SNPHO15079 494 aa12.07□□□□□ -0.48
ATP2B1-210ENST00000552275 OXER1Q8TDS5 423 aa12.05□□□□□ -0.48
ATP2B1-210ENST00000552275 UPF1Q92900 1129 aaKnown RBP eCLIP12.05□□□□□ -0.48
ATP2B1-210ENST00000552275 AK7Q96M32 723 aa12.03□□□□□ -0.48
ATP2B1-210ENST00000552275 GPR37O15354 613 aa12.01□□□□□ -0.49
ATP2B1-210ENST00000552275 GRXCR2A6NFK2 248 aa12□□□□□ -0.49
ATP2B1-210ENST00000552275 PTGER2P43116 358 aa12□□□□□ -0.49
ATP2B1-210ENST00000552275 CDAN1Q8IWY9 1227 aa12□□□□□ -0.49
ATP2B1-210ENST00000552275 KRI1Q8N9T8 703 aaKnown RBP12□□□□□ -0.49
ATP2B1-210ENST00000552275 OSBPP22059 807 aa11.97□□□□□ -0.49
ATP2B1-210ENST00000552275 TBC1D12O60347 775 aa11.96□□□□□ -0.49
ATP2B1-210ENST00000552275 MARVELD3Q96A59 401 aa11.96□□□□□ -0.49
ATP2B1-210ENST00000552275 TIMELESSQ9UNS1 1208 aa11.96□□□□□ -0.49
ATP2B1-210ENST00000552275 NUTM2FA1L443 756 aa11.94□□□□□ -0.5
ATP2B1-210ENST00000552275 EVI5O60447 810 aa11.94□□□□□ -0.5
ATP2B1-210ENST00000552275 PTCD2Q8WV60 388 aaKnown RBP11.94□□□□□ -0.5
ATP2B1-210ENST00000552275 DDX12PQ92771 950 aa11.93□□□□□ -0.5
ATP2B1-210ENST00000552275 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
ATP2B1-210ENST00000552275 TRIM66O15016 1216 aa11.91□□□□□ -0.5
ATP2B1-210ENST00000552275 SLC34A2O95436 690 aa11.91□□□□□ -0.5
ATP2B1-210ENST00000552275 ERICH6Q7L0X2 663 aa11.91□□□□□ -0.5
ATP2B1-210ENST00000552275 GPBP1L1Q9HC44 474 aaPredicted RBP11.89□□□□□ -0.51
ATP2B1-210ENST00000552275 MINK1Q8N4C8 1332 aaPredicted RBP11.88□□□□□ -0.51
ATP2B1-210ENST00000552275 PDE4DQ08499 809 aa11.88□□□□□ -0.51
ATP2B1-210ENST00000552275 FCHSD2O94868 740 aa11.87□□□□□ -0.51
ATP2B1-210ENST00000552275 MAP2K5Q13163 448 aa11.87□□□□□ -0.51
ATP2B1-210ENST00000552275 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
ATP2B1-210ENST00000552275 GNPATO15228 680 aa11.86□□□□□ -0.51
ATP2B1-210ENST00000552275 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
ATP2B1-210ENST00000552275 EMP3P54852 163 aa11.86□□□□□ -0.51
ATP2B1-210ENST00000552275 HIC1Q14526 733 aa11.86□□□□□ -0.51
ATP2B1-210ENST00000552275 IRF6O14896 467 aa11.84□□□□□ -0.51
ATP2B1-210ENST00000552275 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
ATP2B1-210ENST00000552275 KDM4CQ9H3R0 1056 aa11.84□□□□□ -0.51
ATP2B1-210ENST00000552275 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
ATP2B1-210ENST00000552275 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
ATP2B1-210ENST00000552275 PTGDRQ13258 359 aa11.81□□□□□ -0.52
ATP2B1-210ENST00000552275 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
ATP2B1-210ENST00000552275 FAM205CA6NFA0 338 aa11.8□□□□□ -0.52
ATP2B1-210ENST00000552275 FECHP22830 423 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms