RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SLC39A7Q92504 469 aa9.74□□□□□ -0.85
HOXB3-213ENST00000552000 RUSC2Q8N2Y8 1516 aa9.73□□□□□ -0.85
HOXB3-213ENST00000552000 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
HOXB3-213ENST00000552000 MS4A3Q96HJ5 214 aa9.73□□□□□ -0.85
HOXB3-213ENST00000552000 C7P10643 843 aa9.72□□□□□ -0.85
HOXB3-213ENST00000552000 ASTLQ6HA08 431 aaPredicted RBP9.72□□□□□ -0.85
HOXB3-213ENST00000552000 MAMSTRQ6ZN01 415 aa9.72□□□□□ -0.85
HOXB3-213ENST00000552000 POTEJP0CG39 1038 aa9.71□□□□□ -0.86
HOXB3-213ENST00000552000 ATMINO43313 823 aaPredicted RBP9.69□□□□□ -0.86
HOXB3-213ENST00000552000 ADGRL1O94910 1474 aa9.69□□□□□ -0.86
HOXB3-213ENST00000552000 TTBK1Q5TCY1 1321 aaPredicted RBP9.69□□□□□ -0.86
HOXB3-213ENST00000552000 SUPT5HO00267 1087 aaKnown RBP9.68□□□□□ -0.86
HOXB3-213ENST00000552000 LCE2DQ5TA82 110 aaPredicted RBP9.67□□□□□ -0.86
HOXB3-213ENST00000552000 TSPYL2Q9H2G4 693 aaPredicted RBP9.67□□□□□ -0.86
HOXB3-213ENST00000552000 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
HOXB3-213ENST00000552000 PPRC1Q5VV67 1664 aaKnown RBP9.66□□□□□ -0.86
HOXB3-213ENST00000552000 HECW2Q9P2P5 1572 aa9.66□□□□□ -0.86
HOXB3-213ENST00000552000 KIAA0586Q9BVV6 1533 aa9.66□□□□□ -0.86
HOXB3-213ENST00000552000 PTPRGP23470 1445 aa9.65□□□□□ -0.86
HOXB3-213ENST00000552000 ASXL2Q76L83 1435 aa9.64□□□□□ -0.87
HOXB3-213ENST00000552000 FAM163AQ96GL9 167 aaPredicted RBP9.63□□□□□ -0.87
HOXB3-213ENST00000552000 EHMT2Q96KQ7 1210 aa9.63□□□□□ -0.87
HOXB3-213ENST00000552000 ABCC2Q92887 1545 aa9.62□□□□□ -0.87
HOXB3-213ENST00000552000 PLB1Q6P1J6 1458 aa9.62□□□□□ -0.87
HOXB3-213ENST00000552000 COL17A1Q9UMD9 1497 aaPredicted RBP9.62□□□□□ -0.87
HOXB3-213ENST00000552000 GLI2P10070 1586 aa9.61□□□□□ -0.87
HOXB3-213ENST00000552000 IGF1RP08069 1367 aa9.61□□□□□ -0.87
HOXB3-213ENST00000552000 ATN1P54259 1190 aaPredicted RBP9.6□□□□□ -0.87
HOXB3-213ENST00000552000 CUL7Q14999 1698 aa9.6□□□□□ -0.87
HOXB3-213ENST00000552000 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
HOXB3-213ENST00000552000 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
HOXB3-213ENST00000552000 CCDC61Q9Y6R9 512 aa9.58□□□□□ -0.88
HOXB3-213ENST00000552000 CARMIL2Q6F5E8 1435 aa9.57□□□□□ -0.88
HOXB3-213ENST00000552000 KIF27Q86VH2 1401 aa9.56□□□□□ -0.88
HOXB3-213ENST00000552000 EPRSP07814 1512 aaKnown RBP9.56□□□□□ -0.88
HOXB3-213ENST00000552000 UHRF1BP1LA0JNW5 1464 aa9.56□□□□□ -0.88
HOXB3-213ENST00000552000 MAP3K4Q9Y6R4 1608 aa9.56□□□□□ -0.88
HOXB3-213ENST00000552000 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
HOXB3-213ENST00000552000 TEX14Q8IWB6 1497 aa9.55□□□□□ -0.88
HOXB3-213ENST00000552000 FBXO41Q8TF61 875 aa9.55□□□□□ -0.88
HOXB3-213ENST00000552000 KIF12Q96FN5 646 aa9.55□□□□□ -0.88
HOXB3-213ENST00000552000 CARMIL1Q5VZK9 1371 aa9.54□□□□□ -0.88
HOXB3-213ENST00000552000 BMP2KQ9NSY1 1161 aaPredicted RBP9.54□□□□□ -0.88
HOXB3-213ENST00000552000 IQGAP2Q13576 1575 aa9.53□□□□□ -0.88
HOXB3-213ENST00000552000 KDM5BQ9UGL1 1544 aa9.52□□□□□ -0.88
HOXB3-213ENST00000552000 SEC24BO95487 1268 aa9.51□□□□□ -0.89
HOXB3-213ENST00000552000 TIE1P35590 1138 aa9.51□□□□□ -0.89
HOXB3-213ENST00000552000 ZCCHC11Q5TAX3 1644 aaKnown RBP9.51□□□□□ -0.89
HOXB3-213ENST00000552000 DISP1Q96F81 1524 aa9.51□□□□□ -0.89
HOXB3-213ENST00000552000 POTEFA5A3E0 1075 aa9.5□□□□□ -0.89
HOXB3-213ENST00000552000 MAP3K13O43283 966 aa9.49□□□□□ -0.89
HOXB3-213ENST00000552000 WDR7Q9Y4E6 1490 aa9.48□□□□□ -0.89
HOXB3-213ENST00000552000 MIER1Q8N108 512 aa9.48□□□□□ -0.89
HOXB3-213ENST00000552000 PROM2Q8N271 834 aa9.48□□□□□ -0.89
HOXB3-213ENST00000552000 KIF21BO75037 1637 aa9.47□□□□□ -0.89
HOXB3-213ENST00000552000 KCNH8Q96L42 1107 aa9.47□□□□□ -0.89
HOXB3-213ENST00000552000 TRPC6Q9Y210 931 aa9.47□□□□□ -0.89
HOXB3-213ENST00000552000 CD109Q6YHK3 1445 aa9.47□□□□□ -0.89
HOXB3-213ENST00000552000 MAGI3Q5TCQ9 1506 aa9.45□□□□□ -0.9
HOXB3-213ENST00000552000 UGGT2Q9NYU1 1516 aa9.45□□□□□ -0.9
HOXB3-213ENST00000552000 KIAA0556O60303 1618 aa9.45□□□□□ -0.9
HOXB3-213ENST00000552000 CDAN1Q8IWY9 1227 aa9.44□□□□□ -0.9
HOXB3-213ENST00000552000 RASEFQ8IZ41 740 aa9.44□□□□□ -0.9
HOXB3-213ENST00000552000 CFAP43Q8NDM7 1665 aa9.44□□□□□ -0.9
HOXB3-213ENST00000552000 TTLL13PA6NNM8 815 aa9.43□□□□□ -0.9
HOXB3-213ENST00000552000 PTPRMP28827 1452 aa9.41□□□□□ -0.9
HOXB3-213ENST00000552000 COLQQ9Y215 455 aaPredicted RBP9.41□□□□□ -0.9
HOXB3-213ENST00000552000 ADAMTSL3P82987 1691 aa9.4□□□□□ -0.9
HOXB3-213ENST00000552000 IER5LQ5T953 404 aa9.4□□□□□ -0.9
HOXB3-213ENST00000552000 TRIM35Q9UPQ4 493 aa9.4□□□□□ -0.9
HOXB3-213ENST00000552000 LMTK3Q96Q04 1460 aa9.4□□□□□ -0.91
HOXB3-213ENST00000552000 RAPGEF2Q9Y4G8 1499 aa9.4□□□□□ -0.91
HOXB3-213ENST00000552000 PLCD3Q8N3E9 789 aa9.39□□□□□ -0.91
HOXB3-213ENST00000552000 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
HOXB3-213ENST00000552000 ARAP3Q8WWN8 1544 aa9.38□□□□□ -0.91
HOXB3-213ENST00000552000 ARID3CA6NKF2 412 aa9.38□□□□□ -0.91
HOXB3-213ENST00000552000 SGIP1Q9BQI5 828 aa9.38□□□□□ -0.91
HOXB3-213ENST00000552000 ABCA8O94911 1581 aa9.37□□□□□ -0.91
HOXB3-213ENST00000552000 PCF11O94913 1555 aaKnown RBP9.37□□□□□ -0.91
HOXB3-213ENST00000552000 ARID4BQ4LE39 1312 aaPredicted RBP9.37□□□□□ -0.91
HOXB3-213ENST00000552000 RAPGEF3O95398 923 aa9.36□□□□□ -0.91
HOXB3-213ENST00000552000 ZBTB47Q9UFB7 747 aaPredicted RBP9.36□□□□□ -0.91
HOXB3-213ENST00000552000 MADDQ8WXG6 1647 aa9.35□□□□□ -0.91
HOXB3-213ENST00000552000 HSPA2P54652 639 aa9.35□□□□□ -0.91
HOXB3-213ENST00000552000 BCORL1Q5H9F3 1711 aa9.35□□□□□ -0.91
HOXB3-213ENST00000552000 SLAIN1Q8ND83 568 aa9.35□□□□□ -0.91
HOXB3-213ENST00000552000 GOLGA3Q08378 1498 aa9.34□□□□□ -0.91
HOXB3-213ENST00000552000 CTTNBP2Q8WZ74 1663 aa9.34□□□□□ -0.91
HOXB3-213ENST00000552000 PHLDB1Q86UU1 1377 aa9.33□□□□□ -0.92
HOXB3-213ENST00000552000 RIMS1Q86UR5 1692 aaKnown RBP9.32□□□□□ -0.92
HOXB3-213ENST00000552000 PLCG2P16885 1265 aa9.32□□□□□ -0.92
HOXB3-213ENST00000552000 ILDR2Q71H61 639 aa9.32□□□□□ -0.92
HOXB3-213ENST00000552000 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
HOXB3-213ENST00000552000 ATP10BO94823 1461 aa9.31□□□□□ -0.92
HOXB3-213ENST00000552000 ABCA9Q8IUA7 1624 aa9.31□□□□□ -0.92
HOXB3-213ENST00000552000 DISP3Q9P2K9 1392 aa9.3□□□□□ -0.92
HOXB3-213ENST00000552000 ST18O60284 1047 aa9.3□□□□□ -0.92
HOXB3-213ENST00000552000 P3H3Q8IVL6 736 aa9.3□□□□□ -0.92
HOXB3-213ENST00000552000 FAM212AQ96EL1 285 aa9.3□□□□□ -0.92
HOXB3-213ENST00000552000 TMEM106CQ9BVX2 250 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms