RNA–Protein interactions for RNA: ENST00000551783.1

RPLP0-223, Transcript of ribosomal protein lateral stalk subunit P0, human

TSL 2

Gene RPLP0, Length 676 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPLP0-223	ENST00000551783	YEATS2	Q9ULM3	1422 aa		31.58	■■■□□ 2.65
RPLP0-223	ENST00000551783	SCAPER	Q9BY12	1400 aa		31.57	■■■□□ 2.64
RPLP0-223	ENST00000551783	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.56	■■■□□ 2.64
RPLP0-223	ENST00000551783	ZFYVE16	Q7Z3T8	1539 aa		31.54	■■■□□ 2.64
RPLP0-223	ENST00000551783	POGZ	Q7Z3K3	1410 aa		31.54	■■■□□ 2.64
RPLP0-223	ENST00000551783	ARHGAP5	Q13017	1502 aa		31.53	■■■□□ 2.64
RPLP0-223	ENST00000551783	CCDC18	Q5T9S5	1454 aa		31.52	■■■□□ 2.64
RPLP0-223	ENST00000551783	FYCO1	Q9BQS8	1478 aa		31.52	■■■□□ 2.64
RPLP0-223	ENST00000551783	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.51	■■■□□ 2.64
RPLP0-223	ENST00000551783	PTPRM	P28827	1452 aa		31.5	■■■□□ 2.63
RPLP0-223	ENST00000551783	PREX2	Q70Z35	1606 aa		31.49	■■■□□ 2.63
RPLP0-223	ENST00000551783	RIMS1	Q86UR5	1692 aa	Known RBP	31.49	■■■□□ 2.63
RPLP0-223	ENST00000551783	CDC42BPA	Q5VT25	1732 aa		31.48	■■■□□ 2.63
RPLP0-223	ENST00000551783	EFCAB2	Q5VUJ9	269 aa		31.46	■■■□□ 2.63
RPLP0-223	ENST00000551783	MAGI2	Q86UL8	1455 aa		31.41	■■■□□ 2.62
RPLP0-223	ENST00000551783	KDM5C	P41229	1560 aa		31.39	■■■□□ 2.61
RPLP0-223	ENST00000551783	ITSN2	Q9NZM3	1697 aa		31.38	■■■□□ 2.61
RPLP0-223	ENST00000551783	ARHGEF12	Q9NZN5	1544 aa		31.37	■■■□□ 2.61
RPLP0-223	ENST00000551783	ABCC1	P33527	1531 aa		31.36	■■■□□ 2.61
RPLP0-223	ENST00000551783	AFAP1	Q8N556	730 aa		31.35	■■■□□ 2.61
RPLP0-223	ENST00000551783	FER1L4	A9Z1Z3	1794 aa		31.35	■■■□□ 2.61
RPLP0-223	ENST00000551783	ZNF518A	Q6AHZ1	1483 aa		31.34	■■■□□ 2.61
RPLP0-223	ENST00000551783	CEP162	Q5TB80	1403 aa		31.32	■■■□□ 2.61
RPLP0-223	ENST00000551783	MLEC	Q14165	292 aa		31.32	■■■□□ 2.6
RPLP0-223	ENST00000551783	ABCA6	Q8N139	1617 aa		31.31	■■■□□ 2.6
RPLP0-223	ENST00000551783	DIP2C	Q9Y2E4	1556 aa		31.3	■■■□□ 2.6
RPLP0-223	ENST00000551783	ATP10A	O60312	1499 aa		31.3	■■■□□ 2.6
RPLP0-223	ENST00000551783	TRAPPC8	Q9Y2L5	1435 aa		31.3	■■■□□ 2.6
RPLP0-223	ENST00000551783	C9orf84	Q5VXU9	1444 aa		31.29	■■■□□ 2.6
RPLP0-223	ENST00000551783	SAMD9L	Q8IVG5	1584 aa		31.29	■■■□□ 2.6
RPLP0-223	ENST00000551783	PLPPR3	Q6T4P5	718 aa		31.28	■■■□□ 2.6
RPLP0-223	ENST00000551783	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.24	■■■□□ 2.59
RPLP0-223	ENST00000551783	KIDINS220	Q9ULH0	1771 aa		31.22	■■■□□ 2.59
RPLP0-223	ENST00000551783	SYCP2	Q9BX26	1530 aa		31.21	■■■□□ 2.59
RPLP0-223	ENST00000551783	LOC105371045	A0A1W2PR82	267 aa		31.2	■■■□□ 2.59
RPLP0-223	ENST00000551783	LMTK3	Q96Q04	1460 aa		31.2	■■■□□ 2.58
RPLP0-223	ENST00000551783	MYT1L	Q9UL68	1186 aa		31.19	■■■□□ 2.58
RPLP0-223	ENST00000551783	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.19	■■■□□ 2.58
RPLP0-223	ENST00000551783	MLH3	Q9UHC1	1453 aa		31.18	■■■□□ 2.58
RPLP0-223	ENST00000551783	MTUS2	Q5JR59	1369 aa		31.16	■■■□□ 2.58
RPLP0-223	ENST00000551783	TIAM1	Q13009	1591 aa		31.15	■■■□□ 2.58
RPLP0-223	ENST00000551783	RERE	Q9P2R6	1566 aa		31.14	■■■□□ 2.58
RPLP0-223	ENST00000551783	EHBP1L1	Q8N3D4	1523 aa		31.13	■■■□□ 2.57
RPLP0-223	ENST00000551783	CCNB3	Q8WWL7	1395 aa		31.09	■■■□□ 2.57
RPLP0-223	ENST00000551783	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.08	■■■□□ 2.57	2e-7	■■□□□ 14.2
RPLP0-223	ENST00000551783	CEBPA	P49715	358 aa	Predicted RBP	31.05	■■■□□ 2.56
RPLP0-223	ENST00000551783	HSPA2	P54652	639 aa		31.05	■■■□□ 2.56
RPLP0-223	ENST00000551783	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.05	■■■□□ 2.56
RPLP0-223	ENST00000551783	ILDR1	Q86SU0	546 aa	Predicted RBP	31.03	■■■□□ 2.56
RPLP0-223	ENST00000551783	INO80	Q9ULG1	1556 aa	Predicted RBP	31.03	■■■□□ 2.56
RPLP0-223	ENST00000551783	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.03	■■■□□ 2.56
RPLP0-223	ENST00000551783	ZNF644	Q9H582	1327 aa	Predicted RBP	31.02	■■■□□ 2.56
RPLP0-223	ENST00000551783	AGL	P35573	1532 aa		31.02	■■■□□ 2.56
RPLP0-223	ENST00000551783	C3	P01024	1663 aa		31.01	■■■□□ 2.55
RPLP0-223	ENST00000551783	ATP7A	Q04656	1500 aa		31.01	■■■□□ 2.55
RPLP0-223	ENST00000551783	PREX1	Q8TCU6	1659 aa		30.99	■■■□□ 2.55
RPLP0-223	ENST00000551783	KIAA1107	Q9UPP5	1409 aa		30.98	■■■□□ 2.55
RPLP0-223	ENST00000551783	SPAG9	O60271	1321 aa	Known RBP	30.96	■■■□□ 2.55
RPLP0-223	ENST00000551783	NCOA2	Q15596	1464 aa		30.95	■■■□□ 2.55
RPLP0-223	ENST00000551783	PLEKHH2	Q8IVE3	1493 aa		30.95	■■■□□ 2.55
RPLP0-223	ENST00000551783	VPS8	Q8N3P4	1428 aa		30.95	■■■□□ 2.54
RPLP0-223	ENST00000551783	PLXNC1	O60486	1568 aa		30.92	■■■□□ 2.54
RPLP0-223	ENST00000551783	MBD5	Q9P267	1494 aa		30.91	■■■□□ 2.54
RPLP0-223	ENST00000551783	ADGB	Q8N7X0	1667 aa		30.87	■■■□□ 2.53
RPLP0-223	ENST00000551783	CAMSAP2	Q08AD1	1489 aa		30.85	■■■□□ 2.53
RPLP0-223	ENST00000551783	CLTC	Q00610	1675 aa	Known RBP	30.84	■■■□□ 2.53
RPLP0-223	ENST00000551783	A2M	P01023	1474 aa		30.84	■■■□□ 2.53
RPLP0-223	ENST00000551783	LRRC9	Q6ZRR7	1453 aa		30.84	■■■□□ 2.53
RPLP0-223	ENST00000551783	SETD1B	Q9UPS6	1966 aa	Known RBP	30.83	■■■□□ 2.53
RPLP0-223	ENST00000551783	MROH2A	A6NES4	1674 aa		30.81	■■■□□ 2.52
RPLP0-223	ENST00000551783	STRC	Q7RTU9	1775 aa		30.8	■■■□□ 2.52
RPLP0-223	ENST00000551783	KANK4	Q5T7N3	995 aa	Predicted RBP	30.79	■■■□□ 2.52
RPLP0-223	ENST00000551783	UHRF1BP1	Q6BDS2	1440 aa		30.76	■■■□□ 2.51
RPLP0-223	ENST00000551783	ESF1	Q9H501	851 aa	Known RBP	30.76	■■■□□ 2.51
RPLP0-223	ENST00000551783	CCDC141	Q6ZP82	1450 aa		30.75	■■■□□ 2.51
RPLP0-223	ENST00000551783	CNTLN	Q9NXG0	1405 aa		30.73	■■■□□ 2.51
RPLP0-223	ENST00000551783	MAP3K1	Q13233	1512 aa		30.7	■■■□□ 2.51
RPLP0-223	ENST00000551783	RTEL1-TNFRSF6B	F6WH68	1400 aa		30.7	■■■□□ 2.5
RPLP0-223	ENST00000551783	GGT6	Q6P531	493 aa		30.69	■■■□□ 2.5
RPLP0-223	ENST00000551783	ARHGEF5	Q12774	1597 aa		30.69	■■■□□ 2.5
RPLP0-223	ENST00000551783	ZMYM3	Q14202	1370 aa		30.67	■■■□□ 2.5
RPLP0-223	ENST00000551783	MYO3A	Q8NEV4	1616 aa		30.62	■■■□□ 2.49
RPLP0-223	ENST00000551783	DHX29	Q7Z478	1369 aa	Known RBP	30.62	■■■□□ 2.49
RPLP0-223	ENST00000551783	MYOM3	Q5VTT5	1437 aa		30.59	■■■□□ 2.49
RPLP0-223	ENST00000551783	NPAT	Q14207	1427 aa		30.58	■■■□□ 2.49
RPLP0-223	ENST00000551783	PTPRK	Q15262	1439 aa		30.57	■■■□□ 2.48
RPLP0-223	ENST00000551783	FBXO41	Q8TF61	875 aa		30.57	■■■□□ 2.48
RPLP0-223	ENST00000551783	ZNF142	P52746	1687 aa	Predicted RBP	30.55	■■■□□ 2.48
RPLP0-223	ENST00000551783	MAST1	Q9Y2H9	1570 aa		30.55	■■■□□ 2.48
RPLP0-223	ENST00000551783	KIF3B	O15066	747 aa		30.54	■■■□□ 2.48
RPLP0-223	ENST00000551783	CAMSAP1	Q5T5Y3	1602 aa		30.54	■■■□□ 2.48
RPLP0-223	ENST00000551783	RSPH4A	Q5TD94	716 aa		30.52	■■■□□ 2.48
RPLP0-223	ENST00000551783	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	30.5	■■■□□ 2.47
RPLP0-223	ENST00000551783	NCOA1	Q15788	1441 aa		30.5	■■■□□ 2.47
RPLP0-223	ENST00000551783	MIA2	Q96PC5	1412 aa		30.5	■■■□□ 2.47
RPLP0-223	ENST00000551783	CROCC2	H7BZ55	1655 aa		30.49	■■■□□ 2.47
RPLP0-223	ENST00000551783	PTPN23	Q9H3S7	1636 aa		30.49	■■■□□ 2.47
RPLP0-223	ENST00000551783	KDM5D	Q9BY66	1539 aa		30.48	■■■□□ 2.47
RPLP0-223	ENST00000551783	TSPY4	P0CV99	314 aa		30.48	■■■□□ 2.47
RPLP0-223	ENST00000551783	TSPY10	P0CW01	314 aa		30.48	■■■□□ 2.47

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms