RNA–Protein interactions for RNA: ENST00000551465.1

R3HDM2-213, Transcript of R3H domain containing 2, humanhuman

TSL 2

Gene R3HDM2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-213ENST00000551465 ZNF710Q8N1W2 664 aa10.63□□□□□ -0.71
R3HDM2-213ENST00000551465 NKX1-1Q15270 411 aaPredicted RBP10.62□□□□□ -0.71
R3HDM2-213ENST00000551465 SPNS2Q8IVW8 549 aa10.62□□□□□ -0.71
R3HDM2-213ENST00000551465 HOXB3P14651 431 aaPredicted RBP10.6□□□□□ -0.71
R3HDM2-213ENST00000551465 MMRN1Q13201 1228 aa10.6□□□□□ -0.71
R3HDM2-213ENST00000551465 DOK7Q18PE1 504 aa10.59□□□□□ -0.71
R3HDM2-213ENST00000551465 HS3ST6Q96QI5 342 aa10.59□□□□□ -0.71
R3HDM2-213ENST00000551465 RTN4Q9NQC3 1192 aaKnown RBP10.58□□□□□ -0.72
R3HDM2-213ENST00000551465 C2orf72A6NCS6 295 aa10.57□□□□□ -0.72
R3HDM2-213ENST00000551465 FAM205CA6NFA0 338 aa10.57□□□□□ -0.72
R3HDM2-213ENST00000551465 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
R3HDM2-213ENST00000551465 RIMBP2O15034 1052 aa10.55□□□□□ -0.72
R3HDM2-213ENST00000551465 TMC2Q8TDI7 906 aa10.55□□□□□ -0.72
R3HDM2-213ENST00000551465 HOXB1P14653 301 aaPredicted RBP10.53□□□□□ -0.72
R3HDM2-213ENST00000551465 DNAJC5Q9H3Z4 198 aa10.53□□□□□ -0.72
R3HDM2-213ENST00000551465 RYDENQ9NUL5 291 aaKnown RBP10.51□□□□□ -0.73
R3HDM2-213ENST00000551465 GTPBP6O43824 516 aaPredicted RBP10.5□□□□□ -0.73
R3HDM2-213ENST00000551465 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
R3HDM2-213ENST00000551465 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
R3HDM2-213ENST00000551465 POTEB3A0JP26 581 aa10.49□□□□□ -0.73
R3HDM2-213ENST00000551465 KIF3CO14782 793 aa10.49□□□□□ -0.73
R3HDM2-213ENST00000551465 ARSIQ5FYB1 569 aa10.49□□□□□ -0.73
R3HDM2-213ENST00000551465 POTEBQ6S5H4 581 aa10.49□□□□□ -0.73
R3HDM2-213ENST00000551465 ZSWIM6Q9HCJ5 1215 aa10.49□□□□□ -0.73
R3HDM2-213ENST00000551465 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.73
R3HDM2-213ENST00000551465 ERBB3P21860 1342 aa10.47□□□□□ -0.73
R3HDM2-213ENST00000551465 GPR153Q6NV75 609 aa10.45□□□□□ -0.74
R3HDM2-213ENST00000551465 PLPP6Q8IY26 295 aa10.42□□□□□ -0.74
R3HDM2-213ENST00000551465 GPHNQ9NQX3 736 aaPredicted RBP10.41□□□□□ -0.74
R3HDM2-213ENST00000551465 DSG2Q14126 1118 aa10.4□□□□□ -0.74
R3HDM2-213ENST00000551465 VARS2Q5ST30 1063 aaKnown RBP10.4□□□□□ -0.74
R3HDM2-213ENST00000551465 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
R3HDM2-213ENST00000551465 NUDT7P0C024 238 aa10.39□□□□□ -0.75
R3HDM2-213ENST00000551465 PCDHGA4Q9Y5G9 962 aa10.38□□□□□ -0.75
R3HDM2-213ENST00000551465 FOXK1P85037 733 aa10.37□□□□□ -0.75
R3HDM2-213ENST00000551465 PDE4AP27815 886 aa10.36□□□□□ -0.75
R3HDM2-213ENST00000551465 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
R3HDM2-213ENST00000551465 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
R3HDM2-213ENST00000551465 ZNF687Q8N1G0 1237 aa10.34□□□□□ -0.75
R3HDM2-213ENST00000551465 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
R3HDM2-213ENST00000551465 ZNF316A6NFI3 1004 aaPredicted RBP10.33□□□□□ -0.76
R3HDM2-213ENST00000551465 SLC34A2O95436 690 aa10.33□□□□□ -0.76
R3HDM2-213ENST00000551465 UPF1Q92900 1129 aaKnown RBP eCLIP10.33□□□□□ -0.76
R3HDM2-213ENST00000551465 CRISPLD2Q9H0B8 497 aa10.33□□□□□ -0.76
R3HDM2-213ENST00000551465 TTBK1Q5TCY1 1321 aaPredicted RBP10.33□□□□□ -0.76
R3HDM2-213ENST00000551465 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
R3HDM2-213ENST00000551465 SPRYD3Q8NCJ5 442 aa10.32□□□□□ -0.76
R3HDM2-213ENST00000551465 PPP1R15BQ5SWA1 713 aa10.31□□□□□ -0.76
R3HDM2-213ENST00000551465 PAXIP1Q6ZW49 1069 aaPredicted RBP10.31□□□□□ -0.76
R3HDM2-213ENST00000551465 LHX6Q9UPM6 363 aa10.31□□□□□ -0.76
R3HDM2-213ENST00000551465 CADPS2Q86UW7 1296 aa10.3□□□□□ -0.76
R3HDM2-213ENST00000551465 TBC1D12O60347 775 aa10.29□□□□□ -0.76
R3HDM2-213ENST00000551465 PTGER2P43116 358 aa10.29□□□□□ -0.76
R3HDM2-213ENST00000551465 RNF166Q96A37 237 aaPredicted RBP10.29□□□□□ -0.76
R3HDM2-213ENST00000551465 PTCD2Q8WV60 388 aaKnown RBP10.28□□□□□ -0.76
R3HDM2-213ENST00000551465 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
R3HDM2-213ENST00000551465 MYT1LQ9UL68 1186 aa10.25□□□□□ -0.77
R3HDM2-213ENST00000551465 ANKRD13DQ6ZTN6 518 aa10.21□□□□□ -0.77
R3HDM2-213ENST00000551465 OXER1Q8TDS5 423 aa10.21□□□□□ -0.77
R3HDM2-213ENST00000551465 AXIN2Q9Y2T1 843 aa10.21□□□□□ -0.77
R3HDM2-213ENST00000551465 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
R3HDM2-213ENST00000551465 PBX2P40425 430 aa10.18□□□□□ -0.78
R3HDM2-213ENST00000551465 MFSD10Q14728 455 aa10.18□□□□□ -0.78
R3HDM2-213ENST00000551465 KDM4FA0A1W2PPD8 638 aa10.17□□□□□ -0.78
R3HDM2-213ENST00000551465 LSM11P83369 360 aaKnown RBP eCLIP10.15□□□□□ -0.78
R3HDM2-213ENST00000551465 EMILIN3Q9NT22 766 aa10.15□□□□□ -0.78
R3HDM2-213ENST00000551465 PSDA5PKW4 1024 aaPredicted RBP10.14□□□□□ -0.79
R3HDM2-213ENST00000551465 EVI5O60447 810 aa10.14□□□□□ -0.79
R3HDM2-213ENST00000551465 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
R3HDM2-213ENST00000551465 PPP4R3BQ5MIZ7 849 aa10.13□□□□□ -0.79
R3HDM2-213ENST00000551465 ZNF454Q8N9F8 522 aa10.13□□□□□ -0.79
R3HDM2-213ENST00000551465 PSEN2P49810 448 aa10.11□□□□□ -0.79
R3HDM2-213ENST00000551465 ARHGAP33O14559 1287 aa10.1□□□□□ -0.79
R3HDM2-213ENST00000551465 WDR70Q9NW82 654 aa10.1□□□□□ -0.79
R3HDM2-213ENST00000551465 DPYSL4O14531 572 aa10.08□□□□□ -0.8
R3HDM2-213ENST00000551465 DMRTA1Q5VZB9 504 aa10.07□□□□□ -0.8
R3HDM2-213ENST00000551465 ANO8Q9HCE9 1232 aaPredicted RBP10.07□□□□□ -0.8
R3HDM2-213ENST00000551465 TSHZ2Q9NRE2 1034 aa10.07□□□□□ -0.8
R3HDM2-213ENST00000551465 KCNK17Q96T54 332 aa10.06□□□□□ -0.8
R3HDM2-213ENST00000551465 FOSBP53539 338 aa10.04□□□□□ -0.8
R3HDM2-213ENST00000551465 CAMK2BQ13554 666 aa10.04□□□□□ -0.8
R3HDM2-213ENST00000551465 KCNH8Q96L42 1107 aa10.03□□□□□ -0.8
R3HDM2-213ENST00000551465 E2F4Q16254 413 aa10.01□□□□□ -0.81
R3HDM2-213ENST00000551465 ADGRD1Q6QNK2 874 aa10.01□□□□□ -0.81
R3HDM2-213ENST00000551465 ZDHHC16Q969W1 377 aa10.01□□□□□ -0.81
R3HDM2-213ENST00000551465 JPH4Q96JJ6 628 aa10□□□□□ -0.81
R3HDM2-213ENST00000551465 STAC3Q96MF2 364 aa10□□□□□ -0.81
R3HDM2-213ENST00000551465 ADAM33Q9BZ11 813 aa10□□□□□ -0.81
R3HDM2-213ENST00000551465 PTPREP23469 700 aa9.99□□□□□ -0.81
R3HDM2-213ENST00000551465 PCDHGA10Q9Y5H3 936 aa9.99□□□□□ -0.81
R3HDM2-213ENST00000551465 DDX12PQ92771 950 aa9.98□□□□□ -0.81
R3HDM2-213ENST00000551465 BCL2L12Q9HB09 334 aa9.98□□□□□ -0.81
R3HDM2-213ENST00000551465 TK2O00142 265 aa9.97□□□□□ -0.81
R3HDM2-213ENST00000551465 HCSTQ9UBK5 93 aa9.97□□□□□ -0.81
R3HDM2-213ENST00000551465 RBM33Q96EV2 1170 aaKnown RBP9.96□□□□□ -0.82
R3HDM2-213ENST00000551465 PHF14O94880 888 aa9.94□□□□□ -0.82
R3HDM2-213ENST00000551465 TYW1BQ6NUM6 668 aa9.94□□□□□ -0.82
R3HDM2-213ENST00000551465 VPS9D1Q9Y2B5 631 aa9.92□□□□□ -0.82
R3HDM2-213ENST00000551465 GRXCR2A6NFK2 248 aa9.91□□□□□ -0.82
R3HDM2-213ENST00000551465 HRO43593 1189 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms