RNA–Protein interactions for RNA: ENST00000551280.1

LINC02258-201, Transcript of long intergenic non-protein coding RNA 2258, humanhuman

TSL 2 BASIC

Gene LINC02258, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02258-201ENST00000551280 PPP1R37O75864 691 aa12.4□□□□□ -0.42
LINC02258-201ENST00000551280 SNPHO15079 494 aa12.36□□□□□ -0.43
LINC02258-201ENST00000551280 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
LINC02258-201ENST00000551280 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
LINC02258-201ENST00000551280 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
LINC02258-201ENST00000551280 LCE2DQ5TA82 110 aaPredicted RBP12.31□□□□□ -0.44
LINC02258-201ENST00000551280 KIF3CO14782 793 aa12.27□□□□□ -0.45
LINC02258-201ENST00000551280 ST18O60284 1047 aa12.26□□□□□ -0.45
LINC02258-201ENST00000551280 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
LINC02258-201ENST00000551280 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
LINC02258-201ENST00000551280 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
LINC02258-201ENST00000551280 C2orf72A6NCS6 295 aa12.23□□□□□ -0.45
LINC02258-201ENST00000551280 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
LINC02258-201ENST00000551280 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
LINC02258-201ENST00000551280 POTEMA6NI47 508 aa12.19□□□□□ -0.46
LINC02258-201ENST00000551280 POTEGQ6S5H5 508 aa12.18□□□□□ -0.46
LINC02258-201ENST00000551280 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
LINC02258-201ENST00000551280 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
LINC02258-201ENST00000551280 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
LINC02258-201ENST00000551280 FOXK1P85037 733 aa12.14□□□□□ -0.47
LINC02258-201ENST00000551280 BCANQ96GW7 911 aa12.14□□□□□ -0.47
LINC02258-201ENST00000551280 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
LINC02258-201ENST00000551280 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
LINC02258-201ENST00000551280 HOXB1P14653 301 aaPredicted RBP12.11□□□□□ -0.47
LINC02258-201ENST00000551280 SLC34A2O95436 690 aa12.1□□□□□ -0.47
LINC02258-201ENST00000551280 PDE4AP27815 886 aa12.1□□□□□ -0.47
LINC02258-201ENST00000551280 NCKAP5LQ9HCH0 1330 aa12.1□□□□□ -0.47
LINC02258-201ENST00000551280 DSG2Q14126 1118 aa12.09□□□□□ -0.47
LINC02258-201ENST00000551280 GPR153Q6NV75 609 aa12.08□□□□□ -0.48
LINC02258-201ENST00000551280 PLPP6Q8IY26 295 aa12.07□□□□□ -0.48
LINC02258-201ENST00000551280 MARVELD3Q96A59 401 aa12.06□□□□□ -0.48
LINC02258-201ENST00000551280 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
LINC02258-201ENST00000551280 EMP3P54852 163 aa12.04□□□□□ -0.48
LINC02258-201ENST00000551280 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
LINC02258-201ENST00000551280 MFSD10Q14728 455 aa12.02□□□□□ -0.49
LINC02258-201ENST00000551280 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
LINC02258-201ENST00000551280 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
LINC02258-201ENST00000551280 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
LINC02258-201ENST00000551280 PTCD2Q8WV60 388 aaKnown RBP12□□□□□ -0.49
LINC02258-201ENST00000551280 PCDHGA4Q9Y5G9 962 aa12□□□□□ -0.49
LINC02258-201ENST00000551280 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
LINC02258-201ENST00000551280 FAM205CA6NFA0 338 aa11.96□□□□□ -0.49
LINC02258-201ENST00000551280 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC02258-201ENST00000551280 HS3ST6Q96QI5 342 aa11.96□□□□□ -0.49
LINC02258-201ENST00000551280 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
LINC02258-201ENST00000551280 ERBB3P21860 1342 aa11.94□□□□□ -0.5
LINC02258-201ENST00000551280 POTEB3A0JP26 581 aa11.94□□□□□ -0.5
LINC02258-201ENST00000551280 POTEBQ6S5H4 581 aa11.94□□□□□ -0.5
LINC02258-201ENST00000551280 TBC1D12O60347 775 aa11.93□□□□□ -0.5
LINC02258-201ENST00000551280 OXER1Q8TDS5 423 aa11.93□□□□□ -0.5
LINC02258-201ENST00000551280 NUDT7P0C024 238 aa11.92□□□□□ -0.5
LINC02258-201ENST00000551280 KDM4FA0A1W2PPD8 638 aa11.91□□□□□ -0.5
LINC02258-201ENST00000551280 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
LINC02258-201ENST00000551280 VARS2Q5ST30 1063 aaKnown RBP11.89□□□□□ -0.51
LINC02258-201ENST00000551280 CAMK2BQ13554 666 aa11.87□□□□□ -0.51
LINC02258-201ENST00000551280 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC02258-201ENST00000551280 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
LINC02258-201ENST00000551280 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
LINC02258-201ENST00000551280 NBR1Q14596 966 aa11.85□□□□□ -0.51
LINC02258-201ENST00000551280 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
LINC02258-201ENST00000551280 ZNF687Q8N1G0 1237 aa11.84□□□□□ -0.51
LINC02258-201ENST00000551280 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
LINC02258-201ENST00000551280 PSDA5PKW4 1024 aaPredicted RBP11.81□□□□□ -0.52
LINC02258-201ENST00000551280 MAP3K9P80192 1104 aa11.8□□□□□ -0.52
LINC02258-201ENST00000551280 KRTAP3-3Q9BYR6 98 aa11.8□□□□□ -0.52
LINC02258-201ENST00000551280 KRTAP3-2Q9BYR7 98 aa11.8□□□□□ -0.52
LINC02258-201ENST00000551280 ANO8Q9HCE9 1232 aaPredicted RBP11.79□□□□□ -0.52
LINC02258-201ENST00000551280 EVI5O60447 810 aa11.77□□□□□ -0.53
LINC02258-201ENST00000551280 E2F4Q16254 413 aa11.75□□□□□ -0.53
LINC02258-201ENST00000551280 ARIH1Q9Y4X5 557 aaPredicted RBP11.72□□□□□ -0.53
LINC02258-201ENST00000551280 DPYSL4O14531 572 aa11.71□□□□□ -0.53
LINC02258-201ENST00000551280 PBX2P40425 430 aa11.71□□□□□ -0.53
LINC02258-201ENST00000551280 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.53
LINC02258-201ENST00000551280 KCNV2Q8TDN2 545 aa11.71□□□□□ -0.53
LINC02258-201ENST00000551280 FOSBP53539 338 aa11.69□□□□□ -0.54
LINC02258-201ENST00000551280 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
LINC02258-201ENST00000551280 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
LINC02258-201ENST00000551280 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
LINC02258-201ENST00000551280 ZNF454Q8N9F8 522 aa11.67□□□□□ -0.54
LINC02258-201ENST00000551280 SPNS2Q8IVW8 549 aa11.66□□□□□ -0.54
LINC02258-201ENST00000551280 PLSCR2Q9NRY7 297 aa11.66□□□□□ -0.54
LINC02258-201ENST00000551280 ARHGAP33O14559 1287 aa11.65□□□□□ -0.54
LINC02258-201ENST00000551280 PDIA6Q15084 440 aa11.65□□□□□ -0.54
LINC02258-201ENST00000551280 SPDYE16A6NNV3 312 aaPredicted RBP11.64□□□□□ -0.55
LINC02258-201ENST00000551280 PTGER2P43116 358 aa11.64□□□□□ -0.55
LINC02258-201ENST00000551280 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
LINC02258-201ENST00000551280 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
LINC02258-201ENST00000551280 PHF14O94880 888 aa11.62□□□□□ -0.55
LINC02258-201ENST00000551280 LSM11P83369 360 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC02258-201ENST00000551280 ZDHHC16Q969W1 377 aa11.62□□□□□ -0.55
LINC02258-201ENST00000551280 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
LINC02258-201ENST00000551280 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
LINC02258-201ENST00000551280 PCDHGA10Q9Y5H3 936 aa11.61□□□□□ -0.55
LINC02258-201ENST00000551280 PSEN2P49810 448 aa11.58□□□□□ -0.56
LINC02258-201ENST00000551280 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
LINC02258-201ENST00000551280 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
LINC02258-201ENST00000551280 EPAS1Q99814 870 aa11.57□□□□□ -0.56
LINC02258-201ENST00000551280 ADAM33Q9BZ11 813 aa11.57□□□□□ -0.56
LINC02258-201ENST00000551280 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
LINC02258-201ENST00000551280 TYW1BQ6NUM6 668 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms