RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 LSM11P83369 360 aaKnown RBP eCLIP14.29□□□□□ -0.12
ATP2B1-208ENST00000551009 ARSIQ5FYB1 569 aa14.29□□□□□ -0.12
ATP2B1-208ENST00000551009 RNF25Q96BH1 459 aaPredicted RBP14.28□□□□□ -0.12
ATP2B1-208ENST00000551009 ZNF316A6NFI3 1004 aaPredicted RBP14.25□□□□□ -0.13
ATP2B1-208ENST00000551009 KHSRPQ92945 711 aaKnown RBP eCLIP14.25□□□□□ -0.13
ATP2B1-208ENST00000551009 RIOK3O14730 519 aaKnown RBP14.23□□□□□ -0.13
ATP2B1-208ENST00000551009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.14□□□□□ -0.15
ATP2B1-208ENST00000551009 VGFO15240 615 aaPredicted RBP14.14□□□□□ -0.15
ATP2B1-208ENST00000551009 PKD2Q13563 968 aa14.14□□□□□ -0.15
ATP2B1-208ENST00000551009 POTEEQ6S8J3 1075 aa14.14□□□□□ -0.15
ATP2B1-208ENST00000551009 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
ATP2B1-208ENST00000551009 MS4A4AQ96JQ5 239 aa14.14□□□□□ -0.15
ATP2B1-208ENST00000551009 HCSTQ9UBK5 93 aa14.14□□□□□ -0.15
ATP2B1-208ENST00000551009 ECM2O94769 699 aaPredicted RBP14.13□□□□□ -0.15
ATP2B1-208ENST00000551009 PBX2P40425 430 aa14.09□□□□□ -0.15
ATP2B1-208ENST00000551009 AXIN2Q9Y2T1 843 aa14.09□□□□□ -0.15
ATP2B1-208ENST00000551009 SOX12O15370 315 aa14.05□□□□□ -0.16
ATP2B1-208ENST00000551009 RGL2O15211 777 aa14.03□□□□□ -0.16
ATP2B1-208ENST00000551009 PHF8Q9UPP1 1060 aa14.03□□□□□ -0.16
ATP2B1-208ENST00000551009 NUDT7P0C024 238 aa14.02□□□□□ -0.17
ATP2B1-208ENST00000551009 TAOK2Q9UL54 1235 aa14.01□□□□□ -0.17
ATP2B1-208ENST00000551009 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
ATP2B1-208ENST00000551009 LHX6Q9UPM6 363 aa13.99□□□□□ -0.17
ATP2B1-208ENST00000551009 ADGRD1Q6QNK2 874 aa13.96□□□□□ -0.17
ATP2B1-208ENST00000551009 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
ATP2B1-208ENST00000551009 STK25O00506 426 aa13.94□□□□□ -0.18
ATP2B1-208ENST00000551009 KIF3CO14782 793 aa13.89□□□□□ -0.19
ATP2B1-208ENST00000551009 ARHGAP33O14559 1287 aa13.87□□□□□ -0.19
ATP2B1-208ENST00000551009 PCDHGA4Q9Y5G9 962 aa13.87□□□□□ -0.19
ATP2B1-208ENST00000551009 C2orf72A6NCS6 295 aa13.85□□□□□ -0.19
ATP2B1-208ENST00000551009 HRO43593 1189 aa13.85□□□□□ -0.19
ATP2B1-208ENST00000551009 NLRP6P59044 892 aa13.85□□□□□ -0.19
ATP2B1-208ENST00000551009 FBXO22Q8NEZ5 403 aa13.85□□□□□ -0.19
ATP2B1-208ENST00000551009 MFRPQ9BY79 579 aa13.84□□□□□ -0.19
ATP2B1-208ENST00000551009 SLC34A2O95436 690 aa13.81□□□□□ -0.2
ATP2B1-208ENST00000551009 DMRTA1Q5VZB9 504 aa13.81□□□□□ -0.2
ATP2B1-208ENST00000551009 KCTD12Q96CX2 325 aaKnown RBP13.81□□□□□ -0.2
ATP2B1-208ENST00000551009 TK2O00142 265 aa13.8□□□□□ -0.2
ATP2B1-208ENST00000551009 IRX2Q9BZI1 471 aaPredicted RBP13.79□□□□□ -0.2
ATP2B1-208ENST00000551009 RGS20O76081 388 aa13.76□□□□□ -0.21
ATP2B1-208ENST00000551009 PSEN2P49810 448 aa13.76□□□□□ -0.21
ATP2B1-208ENST00000551009 HS6ST3Q8IZP7 471 aa13.72□□□□□ -0.21
ATP2B1-208ENST00000551009 PSDA5PKW4 1024 aaPredicted RBP13.7□□□□□ -0.22
ATP2B1-208ENST00000551009 KDM4FA0A1W2PPD8 638 aa13.69□□□□□ -0.22
ATP2B1-208ENST00000551009 CHGAP10645 457 aaKnown RBP13.68□□□□□ -0.22
ATP2B1-208ENST00000551009 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
ATP2B1-208ENST00000551009 PTPN5P54829 565 aa13.65□□□□□ -0.22
ATP2B1-208ENST00000551009 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
ATP2B1-208ENST00000551009 A0A0G2JS52 829 aa13.62□□□□□ -0.23
ATP2B1-208ENST00000551009 PPP1R37O75864 691 aa13.62□□□□□ -0.23
ATP2B1-208ENST00000551009 TMC2Q8TDI7 906 aa13.59□□□□□ -0.23
ATP2B1-208ENST00000551009 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
ATP2B1-208ENST00000551009 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
ATP2B1-208ENST00000551009 PPP4R3BQ5MIZ7 849 aa13.54□□□□□ -0.24
ATP2B1-208ENST00000551009 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
ATP2B1-208ENST00000551009 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
ATP2B1-208ENST00000551009 KCNK17Q96T54 332 aa13.52□□□□□ -0.25
ATP2B1-208ENST00000551009 THSD4Q6ZMP0 1018 aa13.49□□□□□ -0.25
ATP2B1-208ENST00000551009 DCAF8L2P0C7V8 631 aa13.48□□□□□ -0.25
ATP2B1-208ENST00000551009 Q6ZNB5 142 aa13.46□□□□□ -0.25
ATP2B1-208ENST00000551009 RYDENQ9NUL5 291 aaKnown RBP13.42□□□□□ -0.26
ATP2B1-208ENST00000551009 BHMG1C9JSJ3 638 aaPredicted RBP13.41□□□□□ -0.26
ATP2B1-208ENST00000551009 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
ATP2B1-208ENST00000551009 SLC4A5Q9BY07 1137 aa13.39□□□□□ -0.27
ATP2B1-208ENST00000551009 PLPP6Q8IY26 295 aa13.37□□□□□ -0.27
ATP2B1-208ENST00000551009 WNT2BQ93097 391 aa13.37□□□□□ -0.27
ATP2B1-208ENST00000551009 GTPBP6O43824 516 aaPredicted RBP13.36□□□□□ -0.27
ATP2B1-208ENST00000551009 FOXK1P85037 733 aa13.35□□□□□ -0.27
ATP2B1-208ENST00000551009 AMER1Q5JTC6 1135 aaPredicted RBP13.35□□□□□ -0.27
ATP2B1-208ENST00000551009 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
ATP2B1-208ENST00000551009 GOLGA8CPA6NN73 597 aa13.33□□□□□ -0.28
ATP2B1-208ENST00000551009 LCE2BO14633 110 aa13.31□□□□□ -0.28
ATP2B1-208ENST00000551009 TBC1D12O60347 775 aa13.31□□□□□ -0.28
ATP2B1-208ENST00000551009 DSG2Q14126 1118 aa13.3□□□□□ -0.28
ATP2B1-208ENST00000551009 BCL2L12Q9HB09 334 aa13.3□□□□□ -0.28
ATP2B1-208ENST00000551009 MRPL50Q8N5N7 158 aaKnown RBP13.29□□□□□ -0.28
ATP2B1-208ENST00000551009 ZNF454Q8N9F8 522 aa13.28□□□□□ -0.28
ATP2B1-208ENST00000551009 ZBED2Q9BTP6 218 aa13.28□□□□□ -0.28
ATP2B1-208ENST00000551009 ITGBL1O95965 494 aaPredicted RBP13.27□□□□□ -0.29
ATP2B1-208ENST00000551009 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
ATP2B1-208ENST00000551009 CRISPLD2Q9H0B8 497 aa13.26□□□□□ -0.29
ATP2B1-208ENST00000551009 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
ATP2B1-208ENST00000551009 PTPREP23469 700 aa13.21□□□□□ -0.29
ATP2B1-208ENST00000551009 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
ATP2B1-208ENST00000551009 FOSBP53539 338 aa13.18□□□□□ -0.3
ATP2B1-208ENST00000551009 PDE4AP27815 886 aa13.17□□□□□ -0.3
ATP2B1-208ENST00000551009 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
ATP2B1-208ENST00000551009 TRAF7Q6Q0C0 670 aa13.17□□□□□ -0.3
ATP2B1-208ENST00000551009 NBPF3Q9H094 633 aa13.17□□□□□ -0.3
ATP2B1-208ENST00000551009 BBXQ8WY36 941 aaPredicted RBP13.15□□□□□ -0.3
ATP2B1-208ENST00000551009 UPF1Q92900 1129 aaKnown RBP eCLIP13.15□□□□□ -0.3
ATP2B1-208ENST00000551009 LAPTM4AQ15012 233 aa13.14□□□□□ -0.31
ATP2B1-208ENST00000551009 CADPS2Q86UW7 1296 aa13.12□□□□□ -0.31
ATP2B1-208ENST00000551009 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
ATP2B1-208ENST00000551009 GFRA3O60609 400 aa13.09□□□□□ -0.31
ATP2B1-208ENST00000551009 BCAMP50895 628 aa13.09□□□□□ -0.31
ATP2B1-208ENST00000551009 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
ATP2B1-208ENST00000551009 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
ATP2B1-208ENST00000551009 ADAM33Q9BZ11 813 aa13.09□□□□□ -0.31
ATP2B1-208ENST00000551009 MFSD10Q14728 455 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms