RNA–Protein interactions for RNA: ENST00000550814.5

LETMD1-227, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-227ENST00000550814 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.73
LETMD1-227ENST00000550814 KIF3CO14782 793 aa10.44□□□□□ -0.74
LETMD1-227ENST00000550814 SLAIN1Q8ND83 568 aa10.44□□□□□ -0.74
LETMD1-227ENST00000550814 NCKAP5LQ9HCH0 1330 aa10.42□□□□□ -0.74
LETMD1-227ENST00000550814 CRISPLD2Q9H0B8 497 aa10.42□□□□□ -0.74
LETMD1-227ENST00000550814 C2orf72A6NCS6 295 aa10.41□□□□□ -0.74
LETMD1-227ENST00000550814 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
LETMD1-227ENST00000550814 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
LETMD1-227ENST00000550814 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
LETMD1-227ENST00000550814 PDE4AP27815 886 aa10.36□□□□□ -0.75
LETMD1-227ENST00000550814 FOXK1P85037 733 aa10.34□□□□□ -0.75
LETMD1-227ENST00000550814 DSG2Q14126 1118 aa10.34□□□□□ -0.75
LETMD1-227ENST00000550814 MFSD10Q14728 455 aa10.34□□□□□ -0.75
LETMD1-227ENST00000550814 LARP6Q9BRS8 491 aaKnown RBP10.34□□□□□ -0.75
LETMD1-227ENST00000550814 HOXB3P14651 431 aaPredicted RBP10.3□□□□□ -0.76
LETMD1-227ENST00000550814 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
LETMD1-227ENST00000550814 PLPP6Q8IY26 295 aa10.3□□□□□ -0.76
LETMD1-227ENST00000550814 DDX27Q96GQ7 796 aaKnown RBP10.29□□□□□ -0.76
LETMD1-227ENST00000550814 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
LETMD1-227ENST00000550814 SNPHO15079 494 aa10.24□□□□□ -0.77
LETMD1-227ENST00000550814 SLC34A2O95436 690 aa10.22□□□□□ -0.77
LETMD1-227ENST00000550814 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
LETMD1-227ENST00000550814 DOK7Q18PE1 504 aa10.22□□□□□ -0.77
LETMD1-227ENST00000550814 VSIG10Q8N0Z9 540 aa10.22□□□□□ -0.77
LETMD1-227ENST00000550814 SLC24A1O60721 1099 aa10.21□□□□□ -0.77
LETMD1-227ENST00000550814 LCE2DQ5TA82 110 aaPredicted RBP10.21□□□□□ -0.77
LETMD1-227ENST00000550814 EMILIN3Q9NT22 766 aa10.2□□□□□ -0.78
LETMD1-227ENST00000550814 WDR70Q9NW82 654 aa10.2□□□□□ -0.78
LETMD1-227ENST00000550814 ST18O60284 1047 aa10.18□□□□□ -0.78
LETMD1-227ENST00000550814 OXER1Q8TDS5 423 aa10.18□□□□□ -0.78
LETMD1-227ENST00000550814 PTCD2Q8WV60 388 aaKnown RBP10.18□□□□□ -0.78
LETMD1-227ENST00000550814 FAM163AQ96GL9 167 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-227ENST00000550814 E2F4Q16254 413 aa10.17□□□□□ -0.78
LETMD1-227ENST00000550814 GPR153Q6NV75 609 aa10.17□□□□□ -0.78
LETMD1-227ENST00000550814 ZSWIM6Q9HCJ5 1215 aa10.16□□□□□ -0.78
LETMD1-227ENST00000550814 PCDHGA4Q9Y5G9 962 aa10.16□□□□□ -0.78
LETMD1-227ENST00000550814 RIMBP2O15034 1052 aa10.15□□□□□ -0.78
LETMD1-227ENST00000550814 ZNF710Q8N1W2 664 aa10.15□□□□□ -0.78
LETMD1-227ENST00000550814 UPF1Q92900 1129 aaKnown RBP eCLIP10.15□□□□□ -0.78
LETMD1-227ENST00000550814 HOXB1P14653 301 aaPredicted RBP10.14□□□□□ -0.79
LETMD1-227ENST00000550814 ARSIQ5FYB1 569 aa10.14□□□□□ -0.79
LETMD1-227ENST00000550814 KHSRPQ92945 711 aaKnown RBP eCLIP10.14□□□□□ -0.799e-6■■□□□ 14.4
LETMD1-227ENST00000550814 KDM4FA0A1W2PPD8 638 aa10.12□□□□□ -0.79
LETMD1-227ENST00000550814 KCNV2Q8TDN2 545 aa10.12□□□□□ -0.79
LETMD1-227ENST00000550814 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-227ENST00000550814 DPYSL4O14531 572 aa10.09□□□□□ -0.79
LETMD1-227ENST00000550814 TBC1D12O60347 775 aa10.08□□□□□ -0.8
LETMD1-227ENST00000550814 NUDT7P0C024 238 aa10.08□□□□□ -0.8
LETMD1-227ENST00000550814 MAP3K9P80192 1104 aa10.07□□□□□ -0.8
LETMD1-227ENST00000550814 MARVELD3Q96A59 401 aa10.07□□□□□ -0.8
LETMD1-227ENST00000550814 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
LETMD1-227ENST00000550814 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
LETMD1-227ENST00000550814 EVI5O60447 810 aa10.04□□□□□ -0.8
LETMD1-227ENST00000550814 ANO8Q9HCE9 1232 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-227ENST00000550814 EMP3P54852 163 aa10.02□□□□□ -0.81
LETMD1-227ENST00000550814 PDIA6Q15084 440 aa10.02□□□□□ -0.81
LETMD1-227ENST00000550814 ZNF316A6NFI3 1004 aaPredicted RBP10.01□□□□□ -0.81
LETMD1-227ENST00000550814 LHX6Q9UPM6 363 aa10.01□□□□□ -0.81
LETMD1-227ENST00000550814 POTEB3A0JP26 581 aa10□□□□□ -0.81
LETMD1-227ENST00000550814 POTEBQ6S5H4 581 aa10□□□□□ -0.81
LETMD1-227ENST00000550814 SPDYE16A6NNV3 312 aaPredicted RBP9.99□□□□□ -0.81
LETMD1-227ENST00000550814 FAM205CA6NFA0 338 aa9.98□□□□□ -0.81
LETMD1-227ENST00000550814 POTEMA6NI47 508 aa9.97□□□□□ -0.81
LETMD1-227ENST00000550814 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
LETMD1-227ENST00000550814 ERBB3P21860 1342 aa9.97□□□□□ -0.81
LETMD1-227ENST00000550814 PTGER2P43116 358 aa9.96□□□□□ -0.82
LETMD1-227ENST00000550814 HS3ST6Q96QI5 342 aa9.96□□□□□ -0.82
LETMD1-227ENST00000550814 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
LETMD1-227ENST00000550814 FOSBP53539 338 aa9.93□□□□□ -0.82
LETMD1-227ENST00000550814 SEMA3EO15041 775 aa9.92□□□□□ -0.82
LETMD1-227ENST00000550814 JPH4Q96JJ6 628 aa9.92□□□□□ -0.82
LETMD1-227ENST00000550814 DDX12PQ92771 950 aa9.91□□□□□ -0.82
LETMD1-227ENST00000550814 PCDHGA10Q9Y5H3 936 aa9.91□□□□□ -0.82
LETMD1-227ENST00000550814 PSDA5PKW4 1024 aaPredicted RBP9.9□□□□□ -0.82
LETMD1-227ENST00000550814 PHF14O94880 888 aa9.9□□□□□ -0.82
LETMD1-227ENST00000550814 MLLT3P42568 568 aaPredicted RBP9.9□□□□□ -0.82
LETMD1-227ENST00000550814 ZNF454Q8N9F8 522 aa9.9□□□□□ -0.82
LETMD1-227ENST00000550814 ZNF687Q8N1G0 1237 aa9.89□□□□□ -0.83
LETMD1-227ENST00000550814 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
LETMD1-227ENST00000550814 POTEEQ6S8J3 1075 aa9.88□□□□□ -0.83
LETMD1-227ENST00000550814 TESPA1A2RU30 521 aaPredicted RBP9.87□□□□□ -0.83
LETMD1-227ENST00000550814 GRXCR2A6NFK2 248 aa9.87□□□□□ -0.83
LETMD1-227ENST00000550814 PRIM1P49642 420 aaKnown RBP9.87□□□□□ -0.83
LETMD1-227ENST00000550814 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
LETMD1-227ENST00000550814 ZDHHC16Q969W1 377 aa9.86□□□□□ -0.83
LETMD1-227ENST00000550814 EPAS1Q99814 870 aa9.86□□□□□ -0.83
LETMD1-227ENST00000550814 OSBPP22059 807 aa9.85□□□□□ -0.83
LETMD1-227ENST00000550814 ADAM33Q9BZ11 813 aa9.85□□□□□ -0.83
LETMD1-227ENST00000550814 NBR1Q14596 966 aa9.84□□□□□ -0.83
LETMD1-227ENST00000550814 CDAN1Q8IWY9 1227 aa9.84□□□□□ -0.83
LETMD1-227ENST00000550814 FBXW7Q969H0 707 aa9.83□□□□□ -0.84
LETMD1-227ENST00000550814 BCL2L12Q9HB09 334 aa9.83□□□□□ -0.84
LETMD1-227ENST00000550814 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
LETMD1-227ENST00000550814 KRTAP3-2Q9BYR7 98 aa9.82□□□□□ -0.84
LETMD1-227ENST00000550814 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
LETMD1-227ENST00000550814 RBM33Q96EV2 1170 aaKnown RBP9.8□□□□□ -0.84
LETMD1-227ENST00000550814 AXIN2Q9Y2T1 843 aa9.8□□□□□ -0.84
LETMD1-227ENST00000550814 PBX2P40425 430 aa9.79□□□□□ -0.84
LETMD1-227ENST00000550814 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
LETMD1-227ENST00000550814 PSEN2P49810 448 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms