RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 NEUROD2Q15784 382 aa10.35□□□□□ -0.75
RAB3IP-213ENST00000550647 MS4A3Q96HJ5 214 aa10.35□□□□□ -0.75
RAB3IP-213ENST00000550647 GPHNQ9NQX3 736 aaPredicted RBP10.35□□□□□ -0.75
RAB3IP-213ENST00000550647 TRPC6Q9Y210 931 aa10.33□□□□□ -0.76
RAB3IP-213ENST00000550647 PPP1R15BQ5SWA1 713 aa10.32□□□□□ -0.76
RAB3IP-213ENST00000550647 ARXQ96QS3 562 aa10.32□□□□□ -0.76
RAB3IP-213ENST00000550647 SPDYE16A6NNV3 312 aaPredicted RBP10.3□□□□□ -0.76
RAB3IP-213ENST00000550647 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
RAB3IP-213ENST00000550647 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
RAB3IP-213ENST00000550647 TTLL13PA6NNM8 815 aa10.29□□□□□ -0.76
RAB3IP-213ENST00000550647 AK7Q96M32 723 aa10.28□□□□□ -0.76
RAB3IP-213ENST00000550647 PDIA6Q15084 440 aa10.27□□□□□ -0.77
RAB3IP-213ENST00000550647 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
RAB3IP-213ENST00000550647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■■□□□ 13.1
RAB3IP-213ENST00000550647 MLLT3P42568 568 aaPredicted RBP10.25□□□□□ -0.77
RAB3IP-213ENST00000550647 FOXK1P85037 733 aa10.24□□□□□ -0.77
RAB3IP-213ENST00000550647 RBM26Q5T8P6 1007 aaKnown RBP10.24□□□□□ -0.77
RAB3IP-213ENST00000550647 BMP2KQ9NSY1 1161 aaPredicted RBP10.24□□□□□ -0.77
RAB3IP-213ENST00000550647 EMILIN3Q9NT22 766 aa10.24□□□□□ -0.77
RAB3IP-213ENST00000550647 POTEIP0CG38 1075 aa10.23□□□□□ -0.77
RAB3IP-213ENST00000550647 DSG2Q14126 1118 aa10.21□□□□□ -0.77
RAB3IP-213ENST00000550647 ASTLQ6HA08 431 aaPredicted RBP10.21□□□□□ -0.77
RAB3IP-213ENST00000550647 MICALL2Q8IY33 904 aa10.21□□□□□ -0.77
RAB3IP-213ENST00000550647 DPYSL4O14531 572 aa10.2□□□□□ -0.78
RAB3IP-213ENST00000550647 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
RAB3IP-213ENST00000550647 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
RAB3IP-213ENST00000550647 PDCD7Q8N8D1 485 aaKnown RBP10.19□□□□□ -0.78
RAB3IP-213ENST00000550647 GPR37O15354 613 aa10.18□□□□□ -0.78
RAB3IP-213ENST00000550647 ATMINO43313 823 aaPredicted RBP10.18□□□□□ -0.78
RAB3IP-213ENST00000550647 TMC2Q8TDI7 906 aa10.17□□□□□ -0.78
RAB3IP-213ENST00000550647 KIF3CO14782 793 aa10.16□□□□□ -0.78
RAB3IP-213ENST00000550647 TRIM66O15016 1216 aa10.15□□□□□ -0.78
RAB3IP-213ENST00000550647 DPY19L2Q6NUT2 758 aa10.15□□□□□ -0.78
RAB3IP-213ENST00000550647 KRI1Q8N9T8 703 aaKnown RBP10.15□□□□□ -0.78
RAB3IP-213ENST00000550647 SLC39A7Q92504 469 aa10.15□□□□□ -0.78
RAB3IP-213ENST00000550647 IER5LQ5T953 404 aa10.14□□□□□ -0.79
RAB3IP-213ENST00000550647 IRX5P78411 483 aaPredicted RBP10.13□□□□□ -0.79
RAB3IP-213ENST00000550647 KDM4CQ9H3R0 1056 aa10.13□□□□□ -0.79
RAB3IP-213ENST00000550647 C7P10643 843 aa10.12□□□□□ -0.79
RAB3IP-213ENST00000550647 ATN1P54259 1190 aaPredicted RBP10.12□□□□□ -0.79
RAB3IP-213ENST00000550647 PDE4DQ08499 809 aa10.12□□□□□ -0.79
RAB3IP-213ENST00000550647 PLPP6Q8IY26 295 aa10.12□□□□□ -0.79
RAB3IP-213ENST00000550647 GPBP1L1Q9HC44 474 aaPredicted RBP10.12□□□□□ -0.79
RAB3IP-213ENST00000550647 OCEL1Q9H607 264 aa10.1□□□□□ -0.79
RAB3IP-213ENST00000550647 MINK1Q8N4C8 1332 aaPredicted RBP10.09□□□□□ -0.79
RAB3IP-213ENST00000550647 C2orf72A6NCS6 295 aa10.09□□□□□ -0.79
RAB3IP-213ENST00000550647 PTGER2P43116 358 aa10.09□□□□□ -0.79
RAB3IP-213ENST00000550647 METRNQ9UJH8 293 aa10.09□□□□□ -0.79
RAB3IP-213ENST00000550647 BOLA1Q9Y3E2 137 aa10.09□□□□□ -0.79
RAB3IP-213ENST00000550647 HOMEZQ8IX15 550 aa10.08□□□□□ -0.8
RAB3IP-213ENST00000550647 PELP1Q8IZL8 1130 aaKnown RBP10.08□□□□□ -0.8
RAB3IP-213ENST00000550647 LHX8Q68G74 356 aa10.07□□□□□ -0.8
RAB3IP-213ENST00000550647 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
RAB3IP-213ENST00000550647 AMHR2Q16671 573 aa10.05□□□□□ -0.8
RAB3IP-213ENST00000550647 OSBPP22059 807 aa10.04□□□□□ -0.8
RAB3IP-213ENST00000550647 MAP3K9P80192 1104 aa10.04□□□□□ -0.8
RAB3IP-213ENST00000550647 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
RAB3IP-213ENST00000550647 IL27Q8NEV9 243 aa10.03□□□□□ -0.8
RAB3IP-213ENST00000550647 SEC24BO95487 1268 aa10.02□□□□□ -0.81
RAB3IP-213ENST00000550647 L3MBTL3Q96JM7 780 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-213ENST00000550647 G3V3G9 751 aa10.01□□□□□ -0.81
RAB3IP-213ENST00000550647 IRF6O14896 467 aa10.01□□□□□ -0.81
RAB3IP-213ENST00000550647 HIC1Q14526 733 aa10.01□□□□□ -0.81
RAB3IP-213ENST00000550647 CCDC102AQ96A19 550 aa10.01□□□□□ -0.81
RAB3IP-213ENST00000550647 GNPATO15228 680 aa10□□□□□ -0.81
RAB3IP-213ENST00000550647 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
RAB3IP-213ENST00000550647 GRXCR2A6NFK2 248 aa9.99□□□□□ -0.81
RAB3IP-213ENST00000550647 FCHSD2O94868 740 aa9.99□□□□□ -0.81
RAB3IP-213ENST00000550647 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
RAB3IP-213ENST00000550647 PLCG2P16885 1265 aa9.97□□□□□ -0.81
RAB3IP-213ENST00000550647 TMEM92Q6UXU6 159 aa9.97□□□□□ -0.81
RAB3IP-213ENST00000550647 FAM117AQ9C073 453 aa9.97□□□□□ -0.81
RAB3IP-213ENST00000550647 PLEKHG3A1L390 1219 aa9.96□□□□□ -0.82
RAB3IP-213ENST00000550647 GOPCQ9HD26 462 aa9.96□□□□□ -0.82
RAB3IP-213ENST00000550647 TBC1D12O60347 775 aa9.95□□□□□ -0.82
RAB3IP-213ENST00000550647 MAMSTRQ6ZN01 415 aa9.95□□□□□ -0.82
RAB3IP-213ENST00000550647 PARP9Q8IXQ6 854 aa9.95□□□□□ -0.82
RAB3IP-213ENST00000550647 ZMYND15Q9H091 742 aa9.95□□□□□ -0.82
RAB3IP-213ENST00000550647 SUPT5HO00267 1087 aaKnown RBP9.94□□□□□ -0.82
RAB3IP-213ENST00000550647 PTGDRQ13258 359 aa9.93□□□□□ -0.82
RAB3IP-213ENST00000550647 PTCD2Q8WV60 388 aaKnown RBP9.93□□□□□ -0.82
RAB3IP-213ENST00000550647 UPF1Q92900 1129 aaKnown RBP eCLIP9.93□□□□□ -0.82
RAB3IP-213ENST00000550647 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
RAB3IP-213ENST00000550647 ANO8Q9HCE9 1232 aaPredicted RBP9.92□□□□□ -0.82
RAB3IP-213ENST00000550647 EVI5O60447 810 aa9.91□□□□□ -0.82
RAB3IP-213ENST00000550647 SLC34A2O95436 690 aa9.91□□□□□ -0.82
RAB3IP-213ENST00000550647 RSPH6AQ9H0K4 717 aa9.91□□□□□ -0.82
RAB3IP-213ENST00000550647 FECHP22830 423 aa9.9□□□□□ -0.82
RAB3IP-213ENST00000550647 PRIM1P49642 420 aaKnown RBP9.9□□□□□ -0.82
RAB3IP-213ENST00000550647 DDX12PQ92771 950 aa9.9□□□□□ -0.82
RAB3IP-213ENST00000550647 COLQQ9Y215 455 aaPredicted RBP9.9□□□□□ -0.82
RAB3IP-213ENST00000550647 POTEFA5A3E0 1075 aa9.89□□□□□ -0.83
RAB3IP-213ENST00000550647 SCUBE2Q9NQ36 999 aa9.89□□□□□ -0.83
RAB3IP-213ENST00000550647 POTEB2H3BUK9 544 aa9.88□□□□□ -0.83
RAB3IP-213ENST00000550647 FLIIQ13045 1269 aa9.86□□□□□ -0.83
RAB3IP-213ENST00000550647 EPAS1Q99814 870 aa9.86□□□□□ -0.83
RAB3IP-213ENST00000550647 TMUB1Q9BVT8 246 aa9.85□□□□□ -0.83
RAB3IP-213ENST00000550647 PHF14O94880 888 aa9.84□□□□□ -0.83
RAB3IP-213ENST00000550647 EN1Q05925 392 aaPredicted RBP9.84□□□□□ -0.83
RAB3IP-213ENST00000550647 ONECUT3O60422 494 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms