RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 GOLGA3Q08378 1498 aa6.27□□□□□ -1.41
APAF1-209ENST00000550527 ZBED9Q6R2W3 1325 aa6.27□□□□□ -1.41
APAF1-209ENST00000550527 CCDC173Q0VFZ6 552 aa6.27□□□□□ -1.41
APAF1-209ENST00000550527 CASC1Q6TDU7 716 aa6.27□□□□□ -1.41
APAF1-209ENST00000550527 IRX3P78415 501 aaPredicted RBP6.26□□□□□ -1.41
APAF1-209ENST00000550527 DRC7Q8IY82 874 aa6.26□□□□□ -1.41
APAF1-209ENST00000550527 ESPNB1AK53 854 aa6.26□□□□□ -1.41
APAF1-209ENST00000550527 HTATSF1O43719 755 aaKnown RBP6.26□□□□□ -1.41
APAF1-209ENST00000550527 UQCRHLA0A096LP55 91 aa6.25□□□□□ -1.41
APAF1-209ENST00000550527 UQCRHP07919 91 aa6.25□□□□□ -1.41
APAF1-209ENST00000550527 PAXIP1Q6ZW49 1069 aaPredicted RBP6.25□□□□□ -1.41
APAF1-209ENST00000550527 CWC15Q9P013 229 aaKnown RBP6.25□□□□□ -1.41
APAF1-209ENST00000550527 CCDC39Q9UFE4 941 aa6.25□□□□□ -1.41
APAF1-209ENST00000550527 FRAT2O75474 233 aaPredicted RBP6.25□□□□□ -1.41
APAF1-209ENST00000550527 HAP1P54257 671 aaPredicted RBP6.25□□□□□ -1.41
APAF1-209ENST00000550527 HMGN5P82970 282 aaKnown RBP6.25□□□□□ -1.41
APAF1-209ENST00000550527 CENPQQ7L2Z9 268 aaPredicted RBP6.25□□□□□ -1.41
APAF1-209ENST00000550527 ZHX1Q9UKY1 873 aaPredicted RBP6.25□□□□□ -1.41
APAF1-209ENST00000550527 PATL2C9JE40 543 aaKnown RBP6.24□□□□□ -1.41
APAF1-209ENST00000550527 GPS2Q13227 327 aa6.24□□□□□ -1.41
APAF1-209ENST00000550527 PHF14O94880 888 aa6.24□□□□□ -1.41
APAF1-209ENST00000550527 AEBP2Q6ZN18 517 aaPredicted RBP6.24□□□□□ -1.41
APAF1-209ENST00000550527 CHMP5Q9NZZ3 219 aa6.24□□□□□ -1.41
APAF1-209ENST00000550527 SMAP1Q8IYB5 467 aaPredicted RBP6.24□□□□□ -1.41
APAF1-209ENST00000550527 CFAP44Q96MT7 982 aa6.24□□□□□ -1.41
APAF1-209ENST00000550527 DIAPH3Q9NSV4 1193 aa6.24□□□□□ -1.41
APAF1-209ENST00000550527 ZRSR1Q15695 479 aaKnown RBP6.23□□□□□ -1.41
APAF1-209ENST00000550527 WASHC2AQ641Q2 1341 aa6.23□□□□□ -1.41
APAF1-209ENST00000550527 CLCN1P35523 988 aa6.23□□□□□ -1.41
APAF1-209ENST00000550527 PRDM10Q9NQV6 1147 aa6.23□□□□□ -1.41
APAF1-209ENST00000550527 LETM1O95202 739 aaPredicted RBP6.23□□□□□ -1.41
APAF1-209ENST00000550527 SIN3AQ96ST3 1273 aa6.23□□□□□ -1.41
APAF1-209ENST00000550527 DNAJC2Q99543 621 aaKnown RBP6.23□□□□□ -1.41
APAF1-209ENST00000550527 WASHC2CQ9Y4E1 1318 aa6.22□□□□□ -1.41
APAF1-209ENST00000550527 NASPP49321 788 aaPredicted RBP6.22□□□□□ -1.41
APAF1-209ENST00000550527 ZCCHC6Q5VYS8 1495 aaKnown RBP6.22□□□□□ -1.41
APAF1-209ENST00000550527 RRP1P56182 461 aaKnown RBP6.22□□□□□ -1.41
APAF1-209ENST00000550527 PDE3BQ13370 1112 aa6.22□□□□□ -1.41
APAF1-209ENST00000550527 DDX49Q9Y6V7 483 aaKnown RBP6.22□□□□□ -1.41
APAF1-209ENST00000550527 AAMPQ13685 434 aa6.22□□□□□ -1.41
APAF1-209ENST00000550527 AEBP1Q8IUX7 1158 aa6.22□□□□□ -1.41
APAF1-209ENST00000550527 GTPBP4Q9BZE4 634 aaKnown RBP6.22□□□□□ -1.41
APAF1-209ENST00000550527 GRPEL1Q9HAV7 217 aa6.22□□□□□ -1.41
APAF1-209ENST00000550527 WRNQ14191 1432 aaPredicted RBP eCLIP6.21□□□□□ -1.42
APAF1-209ENST00000550527 SENP3-EIF4A1A0A087X0R7 540 aa6.21□□□□□ -1.42
APAF1-209ENST00000550527 TRAK2O60296 914 aa6.21□□□□□ -1.42
APAF1-209ENST00000550527 KTN1Q86UP2 1357 aaKnown RBP6.21□□□□□ -1.42
APAF1-209ENST00000550527 KIF3AQ9Y496 699 aa6.2□□□□□ -1.42
APAF1-209ENST00000550527 EXOC6Q8TAG9 804 aa6.2□□□□□ -1.42
APAF1-209ENST00000550527 BACH2Q9BYV9 841 aa6.2□□□□□ -1.42
APAF1-209ENST00000550527 CGNQ9P2M7 1197 aaKnown RBP6.2□□□□□ -1.42
APAF1-209ENST00000550527 FTSJ3Q8IY81 847 aaKnown RBP6.2□□□□□ -1.42
APAF1-209ENST00000550527 CALCOCO1Q9P1Z2 691 aa6.2□□□□□ -1.42
APAF1-209ENST00000550527 MAPK8IP3Q9UPT6 1336 aa6.2□□□□□ -1.42
APAF1-209ENST00000550527 IPO4Q8TEX9 1081 aaKnown RBP6.2□□□□□ -1.42
APAF1-209ENST00000550527 TPRNQ4KMQ1 711 aa6.2□□□□□ -1.42
APAF1-209ENST00000550527 PMFBP1Q8TBY8 1022 aa6.2□□□□□ -1.42
APAF1-209ENST00000550527 DHX57Q6P158 1386 aaKnown RBP6.19□□□□□ -1.42
APAF1-209ENST00000550527 ZSCAN30Q86W11 494 aa6.19□□□□□ -1.42
APAF1-209ENST00000550527 BRD2P25440 801 aaKnown RBP6.19□□□□□ -1.42
APAF1-209ENST00000550527 CC2D1BQ5T0F9 858 aaKnown RBP6.19□□□□□ -1.42
APAF1-209ENST00000550527 SASS6Q6UVJ0 657 aa6.19□□□□□ -1.42
APAF1-209ENST00000550527 DYNC1I1O14576 645 aa6.19□□□□□ -1.42
APAF1-209ENST00000550527 HSPA5P11021 654 aaKnown RBP6.19□□□□□ -1.42
APAF1-209ENST00000550527 MAPK8IP2Q13387 824 aaPredicted RBP6.19□□□□□ -1.42
APAF1-209ENST00000550527 CHMP4BQ9H444 224 aaKnown RBP6.19□□□□□ -1.42
APAF1-209ENST00000550527 HOMEZQ8IX15 550 aa6.18□□□□□ -1.42
APAF1-209ENST00000550527 KIF16BQ96L93 1317 aa6.18□□□□□ -1.42
APAF1-209ENST00000550527 MFAP1P55081 439 aaKnown RBP6.18□□□□□ -1.42
APAF1-209ENST00000550527 AXDND1Q5T1B0 1012 aaPredicted RBP6.18□□□□□ -1.42
APAF1-209ENST00000550527 DEF6Q9H4E7 631 aa6.18□□□□□ -1.42
APAF1-209ENST00000550527 SETD5Q9C0A6 1442 aa6.18□□□□□ -1.42
APAF1-209ENST00000550527 CBX1P83916 185 aa6.18□□□□□ -1.42
APAF1-209ENST00000550527 PDCL2Q8N4E4 241 aa6.18□□□□□ -1.42
APAF1-209ENST00000550527 RWDD1Q9H446 243 aaPredicted RBP6.18□□□□□ -1.42
APAF1-209ENST00000550527 CCNB3Q8WWL7 1395 aa6.17□□□□□ -1.42
APAF1-209ENST00000550527 TPM3P06753 285 aa6.17□□□□□ -1.42
APAF1-209ENST00000550527 PLCD3Q8N3E9 789 aa6.17□□□□□ -1.42
APAF1-209ENST00000550527 GOLGA6L4A6NEF3 574 aa6.17□□□□□ -1.42
APAF1-209ENST00000550527 ARGLU1Q9NWB6 273 aaPredicted RBP6.17□□□□□ -1.42
APAF1-209ENST00000550527 TIGD1Q96MW7 591 aa6.16□□□□□ -1.42
APAF1-209ENST00000550527 E9PSI1 815 aa6.16□□□□□ -1.42
APAF1-209ENST00000550527 PPP1R15AO75807 674 aaPredicted RBP6.16□□□□□ -1.42
APAF1-209ENST00000550527 CHMP4AQ9BY43 222 aa6.16□□□□□ -1.42
APAF1-209ENST00000550527 KIF20AO95235 890 aa6.16□□□□□ -1.42
APAF1-209ENST00000550527 CLGNO14967 610 aa6.16□□□□□ -1.42
APAF1-209ENST00000550527 CEP164Q9UPV0 1460 aa6.16□□□□□ -1.42
APAF1-209ENST00000550527 KCNJ4P48050 445 aa6.15□□□□□ -1.42
APAF1-209ENST00000550527 RSF1Q96T23 1441 aaPredicted RBP6.15□□□□□ -1.42
APAF1-209ENST00000550527 MCCP23508 829 aa6.15□□□□□ -1.42
APAF1-209ENST00000550527 RDXP35241 583 aaKnown RBP6.15□□□□□ -1.42
APAF1-209ENST00000550527 CCDC94Q9BW85 323 aaPredicted RBP6.15□□□□□ -1.42
APAF1-209ENST00000550527 POGKQ9P215 609 aa6.15□□□□□ -1.42
APAF1-209ENST00000550527 CRBNQ96SW2 442 aa6.15□□□□□ -1.43
APAF1-209ENST00000550527 RALBP1Q15311 655 aa6.15□□□□□ -1.43
APAF1-209ENST00000550527 NBPF1Q3BBV0 1214 aa6.15□□□□□ -1.43
APAF1-209ENST00000550527 PPP4R3BQ5MIZ7 849 aa6.15□□□□□ -1.43
APAF1-209ENST00000550527 HSP90B1P14625 803 aaKnown RBP6.14□□□□□ -1.43
APAF1-209ENST00000550527 SCRIBQ14160 1630 aa6.14□□□□□ -1.43
APAF1-209ENST00000550527 USP8P40818 1118 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms