RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 ARID4BQ4LE39 1312 aaPredicted RBP32.12■■■□□ 2.73
GCN1-207ENST00000550471 LRRIQ1Q96JM4 1722 aa32.11■■■□□ 2.73
GCN1-207ENST00000550471 ZFYVE16Q7Z3T8 1539 aa32.1■■■□□ 2.73
GCN1-207ENST00000550471 ARHGAP5Q13017 1502 aa32.09■■■□□ 2.73
GCN1-207ENST00000550471 ADAMTSL3P82987 1691 aa32.05■■■□□ 2.72
GCN1-207ENST00000550471 ZNF518AQ6AHZ1 1483 aa32.05■■■□□ 2.72
GCN1-207ENST00000550471 BCORL1Q5H9F3 1711 aa32.03■■■□□ 2.72
GCN1-207ENST00000550471 PTPRMP28827 1452 aa31.98■■■□□ 2.71
GCN1-207ENST00000550471 PREX2Q70Z35 1606 aa31.97■■■□□ 2.71
GCN1-207ENST00000550471 YEATS2Q9ULM3 1422 aa31.97■■■□□ 2.71
GCN1-207ENST00000550471 ATP10AO60312 1499 aa31.97■■■□□ 2.71
GCN1-207ENST00000550471 CEP162Q5TB80 1403 aa31.96■■■□□ 2.71
GCN1-207ENST00000550471 C9orf84Q5VXU9 1444 aa31.93■■■□□ 2.7
GCN1-207ENST00000550471 CDC42BPBQ9Y5S2 1711 aa31.93■■■□□ 2.7
GCN1-207ENST00000550471 KDM5CP41229 1560 aa31.93■■■□□ 2.7
GCN1-207ENST00000550471 HECW2Q9P2P5 1572 aa31.92■■■□□ 2.7
GCN1-207ENST00000550471 MTUS2Q5JR59 1369 aa31.91■■■□□ 2.7
GCN1-207ENST00000550471 AFAP1Q8N556 730 aa31.89■■■□□ 2.7
GCN1-207ENST00000550471 MLH3Q9UHC1 1453 aa31.88■■■□□ 2.69
GCN1-207ENST00000550471 MADDQ8WXG6 1647 aa31.88■■■□□ 2.69
GCN1-207ENST00000550471 ABCC1P33527 1531 aa31.87■■■□□ 2.69
GCN1-207ENST00000550471 MYT1LQ9UL68 1186 aa31.86■■■□□ 2.69
GCN1-207ENST00000550471 PLEKHH2Q8IVE3 1493 aa31.84■■■□□ 2.69
GCN1-207ENST00000550471 CDC42BPAQ5VT25 1732 aa31.83■■■□□ 2.69
GCN1-207ENST00000550471 CCNB3Q8WWL7 1395 aa31.83■■■□□ 2.69
GCN1-207ENST00000550471 GPATCH8Q9UKJ3 1502 aaKnown RBP31.83■■■□□ 2.69
GCN1-207ENST00000550471 REREQ9P2R6 1566 aa31.81■■■□□ 2.68
GCN1-207ENST00000550471 CFDP1Q9UEE9 299 aaPredicted RBP31.8■■■□□ 2.68
GCN1-207ENST00000550471 KIAA1107Q9UPP5 1409 aa31.79■■■□□ 2.68
GCN1-207ENST00000550471 EHBP1L1Q8N3D4 1523 aa31.79■■■□□ 2.68
GCN1-207ENST00000550471 ITSN2Q9NZM3 1697 aa31.78■■■□□ 2.68
GCN1-207ENST00000550471 TRAPPC8Q9Y2L5 1435 aa31.77■■■□□ 2.68
GCN1-207ENST00000550471 RIMS1Q86UR5 1692 aaKnown RBP31.76■■■□□ 2.68
GCN1-207ENST00000550471 ZNF777Q9ULD5 760 aaPredicted RBP31.76■■■□□ 2.67
GCN1-207ENST00000550471 ARHGEF12Q9NZN5 1544 aa31.75■■■□□ 2.67
GCN1-207ENST00000550471 MLECQ14165 292 aa31.73■■■□□ 2.67
GCN1-207ENST00000550471 DIP2CQ9Y2E4 1556 aa31.73■■■□□ 2.67
GCN1-207ENST00000550471 AGLP35573 1532 aa31.7■■■□□ 2.67
GCN1-207ENST00000550471 SIGLEC1Q9BZZ2 1709 aa31.7■■■□□ 2.67
GCN1-207ENST00000550471 SAMD9LQ8IVG5 1584 aa31.7■■■□□ 2.67
GCN1-207ENST00000550471 FER1L4A9Z1Z3 1794 aa31.68■■■□□ 2.66
GCN1-207ENST00000550471 SPAG9O60271 1321 aaKnown RBP31.68■■■□□ 2.66
GCN1-207ENST00000550471 VPS8Q8N3P4 1428 aa31.67■■■□□ 2.66
GCN1-207ENST00000550471 SYCP2Q9BX26 1530 aa31.66■■■□□ 2.66
GCN1-207ENST00000550471 ABCA6Q8N139 1617 aa31.65■■■□□ 2.66
GCN1-207ENST00000550471 LOC105371045A0A1W2PR82 267 aa31.64■■■□□ 2.66
GCN1-207ENST00000550471 HNRNPMP52272 730 aaKnown RBP eCLIP31.63■■■□□ 2.65
GCN1-207ENST00000550471 ESF1Q9H501 851 aaKnown RBP31.62■■■□□ 2.65
GCN1-207ENST00000550471 KIDINS220Q9ULH0 1771 aa31.62■■■□□ 2.65
GCN1-207ENST00000550471 TIAM1Q13009 1591 aa31.6■■■□□ 2.65
GCN1-207ENST00000550471 LMTK3Q96Q04 1460 aa31.6■■■□□ 2.65
GCN1-207ENST00000550471 RSPH4AQ5TD94 716 aa31.59■■■□□ 2.65
GCN1-207ENST00000550471 SUPT6HQ7KZ85 1726 aaKnown RBP31.58■■■□□ 2.65
GCN1-207ENST00000550471 MAP3K1Q13233 1512 aa31.56■■■□□ 2.64
GCN1-207ENST00000550471 CNTLNQ9NXG0 1405 aa31.56■■■□□ 2.64
GCN1-207ENST00000550471 ATP7AQ04656 1500 aa31.54■■■□□ 2.64
GCN1-207ENST00000550471 NCOA2Q15596 1464 aa31.54■■■□□ 2.64
GCN1-207ENST00000550471 RTEL1-TNFRSF6BF6WH68 1400 aa31.51■■■□□ 2.64
GCN1-207ENST00000550471 PLPPR3Q6T4P5 718 aa31.51■■■□□ 2.63
GCN1-207ENST00000550471 INO80Q9ULG1 1556 aaPredicted RBP31.5■■■□□ 2.63
GCN1-207ENST00000550471 MBD5Q9P267 1494 aa31.49■■■□□ 2.63
GCN1-207ENST00000550471 LRRC9Q6ZRR7 1453 aa31.48■■■□□ 2.63
GCN1-207ENST00000550471 PPP6R1Q9UPN7 881 aa31.47■■■□□ 2.63
GCN1-207ENST00000550471 A2MP01023 1474 aa31.46■■■□□ 2.63
GCN1-207ENST00000550471 SETD1BQ9UPS6 1966 aaKnown RBP31.46■■■□□ 2.63
GCN1-207ENST00000550471 ZNF644Q9H582 1327 aaPredicted RBP31.45■■■□□ 2.62
GCN1-207ENST00000550471 PREX1Q8TCU6 1659 aa31.42■■■□□ 2.62
GCN1-207ENST00000550471 APLP2Q06481 763 aa31.42■■■□□ 2.62
GCN1-207ENST00000550471 PLXNC1O60486 1568 aa31.42■■■□□ 2.62
GCN1-207ENST00000550471 CCDC141Q6ZP82 1450 aa31.41■■■□□ 2.62
GCN1-207ENST00000550471 CEBPAP49715 358 aaPredicted RBP31.41■■■□□ 2.62
GCN1-207ENST00000550471 ADGBQ8N7X0 1667 aa31.41■■■□□ 2.62
GCN1-207ENST00000550471 UHRF1BP1Q6BDS2 1440 aa31.4■■■□□ 2.62
GCN1-207ENST00000550471 CAMSAP2Q08AD1 1489 aa31.4■■■□□ 2.62
GCN1-207ENST00000550471 TSPY4P0CV99 314 aa31.36■■■□□ 2.61
GCN1-207ENST00000550471 TSPY10P0CW01 314 aa31.36■■■□□ 2.61
GCN1-207ENST00000550471 HSPA2P54652 639 aa31.35■■■□□ 2.61
GCN1-207ENST00000550471 MROH2AA6NES4 1674 aa31.35■■■□□ 2.61
GCN1-207ENST00000550471 MIA2Q96PC5 1412 aa31.34■■■□□ 2.61
GCN1-207ENST00000550471 DHX29Q7Z478 1369 aaKnown RBP31.34■■■□□ 2.61
GCN1-207ENST00000550471 ARHGEF5Q12774 1597 aa31.34■■■□□ 2.61
GCN1-207ENST00000550471 NPATQ14207 1427 aa31.33■■■□□ 2.61
GCN1-207ENST00000550471 C3P01024 1663 aa31.33■■■□□ 2.61
GCN1-207ENST00000550471 DMRT2Q9Y5R5 561 aa31.32■■■□□ 2.6
GCN1-207ENST00000550471 ZMYM3Q14202 1370 aa31.3■■■□□ 2.6
GCN1-207ENST00000550471 ILDR1Q86SU0 546 aaPredicted RBP31.3■■■□□ 2.6
GCN1-207ENST00000550471 MYOM3Q5VTT5 1437 aa31.28■■■□□ 2.6
GCN1-207ENST00000550471 GGT6Q6P531 493 aa31.28■■■□□ 2.6
GCN1-207ENST00000550471 KANK4Q5T7N3 995 aaPredicted RBP31.27■■■□□ 2.6
GCN1-207ENST00000550471 FAM135AQ9P2D6 1515 aa31.25■■■□□ 2.59
GCN1-207ENST00000550471 KIF3BO15066 747 aa31.18■■■□□ 2.58
GCN1-207ENST00000550471 FBXO41Q8TF61 875 aa31.18■■■□□ 2.58
GCN1-207ENST00000550471 MAST1Q9Y2H9 1570 aa31.17■■■□□ 2.58
GCN1-207ENST00000550471 CLTCQ00610 1675 aaKnown RBP31.16■■■□□ 2.58
GCN1-207ENST00000550471 PTPRKQ15262 1439 aa31.12■■■□□ 2.57
GCN1-207ENST00000550471 PTPRTO14522 1441 aa31.1■■■□□ 2.57
GCN1-207ENST00000550471 KDM5DQ9BY66 1539 aa31.08■■■□□ 2.57
GCN1-207ENST00000550471 WASHC2CQ9Y4E1 1318 aa31.08■■■□□ 2.57
GCN1-207ENST00000550471 SHANK2Q9UPX8 1470 aa31.05■■■□□ 2.56
GCN1-207ENST00000550471 STRCQ7RTU9 1775 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms