RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 CDC42BPBQ9Y5S2 1711 aa11.78□□□□□ -0.52
RNF41-208ENST00000550379 ARID3CA6NKF2 412 aa11.77□□□□□ -0.53
RNF41-208ENST00000550379 NEO1Q92859 1461 aa11.76□□□□□ -0.53
RNF41-208ENST00000550379 EFCAB2Q5VUJ9 269 aa11.76□□□□□ -0.53
RNF41-208ENST00000550379 CFDP1Q9UEE9 299 aaPredicted RBP11.76□□□□□ -0.53
RNF41-208ENST00000550379 CD109Q6YHK3 1445 aa11.76□□□□□ -0.53
RNF41-208ENST00000550379 ARHGEF5Q12774 1597 aa11.75□□□□□ -0.53
RNF41-208ENST00000550379 CFAP74Q9C0B2 1584 aa11.75□□□□□ -0.53
RNF41-208ENST00000550379 PTPN23Q9H3S7 1636 aa11.75□□□□□ -0.53
RNF41-208ENST00000550379 KCNH8Q96L42 1107 aa11.74□□□□□ -0.53
RNF41-208ENST00000550379 MBD5Q9P267 1494 aa11.74□□□□□ -0.53
RNF41-208ENST00000550379 KIF13AQ9H1H9 1805 aa11.74□□□□□ -0.53
RNF41-208ENST00000550379 FANCAO15360 1455 aa11.72□□□□□ -0.53
RNF41-208ENST00000550379 TEX14Q8IWB6 1497 aa11.72□□□□□ -0.53
RNF41-208ENST00000550379 AKNAQ7Z591 1439 aa11.72□□□□□ -0.53
RNF41-208ENST00000550379 SHANK2Q9UPX8 1470 aa11.71□□□□□ -0.53
RNF41-208ENST00000550379 ACIN1Q9UKV3 1341 aaKnown RBP11.71□□□□□ -0.53
RNF41-208ENST00000550379 SAMD9LQ8IVG5 1584 aa11.71□□□□□ -0.54
RNF41-208ENST00000550379 ARHGAP5Q13017 1502 aa11.7□□□□□ -0.54
RNF41-208ENST00000550379 CAMSAP2Q08AD1 1489 aa11.7□□□□□ -0.54
RNF41-208ENST00000550379 ROCK1Q13464 1354 aa11.7□□□□□ -0.54
RNF41-208ENST00000550379 HRCP23327 699 aa11.7□□□□□ -0.54
RNF41-208ENST00000550379 FAM69CQ0P6D2 419 aa11.7□□□□□ -0.54
RNF41-208ENST00000550379 PPARGC1BQ86YN6 1023 aaKnown RBP11.7□□□□□ -0.54
RNF41-208ENST00000550379 DNMT1P26358 1616 aaKnown RBP11.7□□□□□ -0.54
RNF41-208ENST00000550379 ABCC1P33527 1531 aa11.7□□□□□ -0.54
RNF41-208ENST00000550379 ADGRL2O95490 1459 aa11.69□□□□□ -0.54
RNF41-208ENST00000550379 RTEL1-TNFRSF6BF6WH68 1400 aa11.69□□□□□ -0.54
RNF41-208ENST00000550379 PPRC1Q5VV67 1664 aaKnown RBP11.68□□□□□ -0.54
RNF41-208ENST00000550379 MAST1Q9Y2H9 1570 aa11.68□□□□□ -0.54
RNF41-208ENST00000550379 ABCC5O15440 1437 aa11.68□□□□□ -0.54
RNF41-208ENST00000550379 DAPK1P53355 1430 aa11.67□□□□□ -0.54
RNF41-208ENST00000550379 CCDC141Q6ZP82 1450 aa11.66□□□□□ -0.54
RNF41-208ENST00000550379 ARHGEF12Q9NZN5 1544 aa11.65□□□□□ -0.54
RNF41-208ENST00000550379 ZNF644Q9H582 1327 aaPredicted RBP11.65□□□□□ -0.54
RNF41-208ENST00000550379 KDM5CP41229 1560 aa11.65□□□□□ -0.54
RNF41-208ENST00000550379 ADGRL1O94910 1474 aa11.64□□□□□ -0.55
RNF41-208ENST00000550379 ZNF518AQ6AHZ1 1483 aa11.64□□□□□ -0.55
RNF41-208ENST00000550379 MLH3Q9UHC1 1453 aa11.64□□□□□ -0.55
RNF41-208ENST00000550379 HFM1A2PYH4 1435 aa11.64□□□□□ -0.55
RNF41-208ENST00000550379 CROCC2H7BZ55 1655 aa11.64□□□□□ -0.55
RNF41-208ENST00000550379 MAGI2Q86UL8 1455 aa11.63□□□□□ -0.55
RNF41-208ENST00000550379 PTPRKQ15262 1439 aa11.63□□□□□ -0.55
RNF41-208ENST00000550379 NCOA1Q15788 1441 aa11.63□□□□□ -0.55
RNF41-208ENST00000550379 SCAPERQ9BY12 1400 aa11.63□□□□□ -0.55
RNF41-208ENST00000550379 POGZQ7Z3K3 1410 aa11.62□□□□□ -0.55
RNF41-208ENST00000550379 ZMYM4Q5VZL5 1548 aa11.62□□□□□ -0.55
RNF41-208ENST00000550379 SYCP2Q9BX26 1530 aa11.62□□□□□ -0.55
RNF41-208ENST00000550379 FAM50AQ14320 339 aaKnown RBP11.62□□□□□ -0.55
RNF41-208ENST00000550379 DENND4BO75064 1496 aaPredicted RBP11.62□□□□□ -0.55
RNF41-208ENST00000550379 TSPY4P0CV99 314 aa11.61□□□□□ -0.55
RNF41-208ENST00000550379 TSPY10P0CW01 314 aa11.61□□□□□ -0.55
RNF41-208ENST00000550379 PLXNC1O60486 1568 aa11.61□□□□□ -0.55
RNF41-208ENST00000550379 TRAPPC8Q9Y2L5 1435 aa11.6□□□□□ -0.55
RNF41-208ENST00000550379 RICTORQ6R327 1708 aa11.6□□□□□ -0.55
RNF41-208ENST00000550379 ANKRD30AQ9BXX3 1397 aa11.6□□□□□ -0.55
RNF41-208ENST00000550379 C9orf84Q5VXU9 1444 aa11.6□□□□□ -0.55
RNF41-208ENST00000550379 HNRNPMP52272 730 aaKnown RBP eCLIP11.59□□□□□ -0.55
RNF41-208ENST00000550379 INO80Q9ULG1 1556 aaPredicted RBP11.58□□□□□ -0.55
RNF41-208ENST00000550379 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
RNF41-208ENST00000550379 NAIPQ13075 1403 aa11.58□□□□□ -0.56
RNF41-208ENST00000550379 ADGBQ8N7X0 1667 aa11.58□□□□□ -0.56
RNF41-208ENST00000550379 ZFYVE16Q7Z3T8 1539 aa11.56□□□□□ -0.56
RNF41-208ENST00000550379 SETD5Q9C0A6 1442 aa11.56□□□□□ -0.56
RNF41-208ENST00000550379 REREQ9P2R6 1566 aa11.56□□□□□ -0.56
RNF41-208ENST00000550379 SPAG9O60271 1321 aaKnown RBP11.56□□□□□ -0.56
RNF41-208ENST00000550379 GCC2Q8IWJ2 1684 aa11.55□□□□□ -0.56
RNF41-208ENST00000550379 ATP7AQ04656 1500 aa11.55□□□□□ -0.56
RNF41-208ENST00000550379 FRMPD1Q5SYB0 1578 aa11.55□□□□□ -0.56
RNF41-208ENST00000550379 KIDINS220Q9ULH0 1771 aa11.55□□□□□ -0.56
RNF41-208ENST00000550379 AFAP1Q8N556 730 aa11.55□□□□□ -0.56
RNF41-208ENST00000550379 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
RNF41-208ENST00000550379 COL17A1Q9UMD9 1497 aaPredicted RBP11.55□□□□□ -0.56
RNF41-208ENST00000550379 TSPOAP1O95153 1857 aa11.55□□□□□ -0.56
RNF41-208ENST00000550379 DUOX2Q9NRD8 1548 aa11.55□□□□□ -0.56
RNF41-208ENST00000550379 BCORL1Q5H9F3 1711 aa11.55□□□□□ -0.56
RNF41-208ENST00000550379 HECW2Q9P2P5 1572 aa11.54□□□□□ -0.56
RNF41-208ENST00000550379 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
RNF41-208ENST00000550379 DHX29Q7Z478 1369 aaKnown RBP11.53□□□□□ -0.56
RNF41-208ENST00000550379 KIF15Q9NS87 1388 aa11.52□□□□□ -0.57
RNF41-208ENST00000550379 ANKRD50Q9ULJ7 1429 aa11.52□□□□□ -0.57
RNF41-208ENST00000550379 AGLP35573 1532 aa11.51□□□□□ -0.57
RNF41-208ENST00000550379 EIF2AK4Q9P2K8 1649 aaKnown RBP11.51□□□□□ -0.57
RNF41-208ENST00000550379 TRHP20396 242 aaPredicted RBP11.5□□□□□ -0.57
RNF41-208ENST00000550379 PPP6R1Q9UPN7 881 aa11.5□□□□□ -0.57
RNF41-208ENST00000550379 RAPGEF3O95398 923 aa11.49□□□□□ -0.57
RNF41-208ENST00000550379 CLSPNQ9HAW4 1339 aa11.49□□□□□ -0.57
RNF41-208ENST00000550379 RAB3GAP2Q9H2M9 1393 aa11.49□□□□□ -0.57
RNF41-208ENST00000550379 ATP10AO60312 1499 aa11.49□□□□□ -0.57
RNF41-208ENST00000550379 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
RNF41-208ENST00000550379 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
RNF41-208ENST00000550379 A2MP01023 1474 aa11.48□□□□□ -0.57
RNF41-208ENST00000550379 DIP2CQ9Y2E4 1556 aa11.48□□□□□ -0.57
RNF41-208ENST00000550379 DEPDC5O75140 1603 aa11.47□□□□□ -0.57
RNF41-208ENST00000550379 KDM6BO15054 1643 aa11.46□□□□□ -0.57
RNF41-208ENST00000550379 ARHGEF40Q8TER5 1519 aa11.46□□□□□ -0.57
RNF41-208ENST00000550379 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.57
RNF41-208ENST00000550379 ABCA6Q8N139 1617 aa11.46□□□□□ -0.58
RNF41-208ENST00000550379 ITGAEP38570 1179 aa11.45□□□□□ -0.58
RNF41-208ENST00000550379 RRP7BPQ9NSQ0 103 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms