RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 TIE1P35590 1138 aa11.29□□□□□ -0.6
HCFC2-204ENST00000550335 BARGINQ6ZT62 677 aa11.29□□□□□ -0.6
HCFC2-204ENST00000550335 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
HCFC2-204ENST00000550335 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
HCFC2-204ENST00000550335 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
HCFC2-204ENST00000550335 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
HCFC2-204ENST00000550335 BMP2KQ9NSY1 1161 aaPredicted RBP11.26□□□□□ -0.61
HCFC2-204ENST00000550335 TRIM35Q9UPQ4 493 aa11.26□□□□□ -0.61
HCFC2-204ENST00000550335 AK7Q96M32 723 aa11.25□□□□□ -0.61
HCFC2-204ENST00000550335 DSG2Q14126 1118 aa11.24□□□□□ -0.61
HCFC2-204ENST00000550335 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
HCFC2-204ENST00000550335 EMILIN3Q9NT22 766 aa11.22□□□□□ -0.61
HCFC2-204ENST00000550335 G3V3G9 751 aa11.2□□□□□ -0.62
HCFC2-204ENST00000550335 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
HCFC2-204ENST00000550335 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
HCFC2-204ENST00000550335 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
HCFC2-204ENST00000550335 SPDYE16A6NNV3 312 aaPredicted RBP11.19□□□□□ -0.62
HCFC2-204ENST00000550335 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
HCFC2-204ENST00000550335 ILDR1Q86SU0 546 aaPredicted RBP11.17□□□□□ -0.62
HCFC2-204ENST00000550335 SUPT5HO00267 1087 aaKnown RBP11.16□□□□□ -0.62
HCFC2-204ENST00000550335 MAP3K9P80192 1104 aa11.16□□□□□ -0.62
HCFC2-204ENST00000550335 PLPP6Q8IY26 295 aa11.16□□□□□ -0.62
HCFC2-204ENST00000550335 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
HCFC2-204ENST00000550335 FOXK1P85037 733 aa11.14□□□□□ -0.63
HCFC2-204ENST00000550335 PDIA6Q15084 440 aa11.14□□□□□ -0.63
HCFC2-204ENST00000550335 ARXQ96QS3 562 aa11.14□□□□□ -0.63
HCFC2-204ENST00000550335 KDM4CQ9H3R0 1056 aa11.13□□□□□ -0.63
HCFC2-204ENST00000550335 C2orf72A6NCS6 295 aa11.12□□□□□ -0.63
HCFC2-204ENST00000550335 HAX1O00165 279 aa11.12□□□□□ -0.63
HCFC2-204ENST00000550335 TRIM66O15016 1216 aa11.12□□□□□ -0.63
HCFC2-204ENST00000550335 ATN1P54259 1190 aaPredicted RBP11.12□□□□□ -0.63
HCFC2-204ENST00000550335 UPF1Q92900 1129 aaKnown RBP eCLIP11.12□□□□□ -0.63
HCFC2-204ENST00000550335 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
HCFC2-204ENST00000550335 PDE4DQ08499 809 aa11.11□□□□□ -0.63
HCFC2-204ENST00000550335 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
HCFC2-204ENST00000550335 OCEL1Q9H607 264 aa11.09□□□□□ -0.63
HCFC2-204ENST00000550335 DAXXQ9UER7 740 aaPredicted RBP11.08□□□□□ -0.64
HCFC2-204ENST00000550335 PLCG2P16885 1265 aa11.05□□□□□ -0.64
HCFC2-204ENST00000550335 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
HCFC2-204ENST00000550335 ATMINO43313 823 aaPredicted RBP11.04□□□□□ -0.64
HCFC2-204ENST00000550335 HOMEZQ8IX15 550 aa11.03□□□□□ -0.64
HCFC2-204ENST00000550335 DDX12PQ92771 950 aa11.03□□□□□ -0.64
HCFC2-204ENST00000550335 EVX2Q03828 476 aa11.02□□□□□ -0.65
HCFC2-204ENST00000550335 TMEM121BQ9BXQ6 578 aaPredicted RBP11.01□□□□□ -0.65
HCFC2-204ENST00000550335 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
HCFC2-204ENST00000550335 KIF3CO14782 793 aa11□□□□□ -0.65
HCFC2-204ENST00000550335 GPR37O15354 613 aa11□□□□□ -0.65
HCFC2-204ENST00000550335 TBC1D12O60347 775 aa11□□□□□ -0.65
HCFC2-204ENST00000550335 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
HCFC2-204ENST00000550335 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
HCFC2-204ENST00000550335 SEC24BO95487 1268 aa10.99□□□□□ -0.65
HCFC2-204ENST00000550335 IER5LQ5T953 404 aa10.99□□□□□ -0.65
HCFC2-204ENST00000550335 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
HCFC2-204ENST00000550335 FAM117AQ9C073 453 aa10.99□□□□□ -0.65
HCFC2-204ENST00000550335 OSBPP22059 807 aa10.98□□□□□ -0.65
HCFC2-204ENST00000550335 CLCN6P51797 869 aa10.98□□□□□ -0.65
HCFC2-204ENST00000550335 IRF6O14896 467 aa10.97□□□□□ -0.65
HCFC2-204ENST00000550335 MAP2K5Q13163 448 aa10.97□□□□□ -0.65
HCFC2-204ENST00000550335 GNPATO15228 680 aa10.96□□□□□ -0.65
HCFC2-204ENST00000550335 FCHSD2O94868 740 aa10.96□□□□□ -0.65
HCFC2-204ENST00000550335 ASTLQ6HA08 431 aaPredicted RBP10.96□□□□□ -0.65
HCFC2-204ENST00000550335 FECHP22830 423 aa10.95□□□□□ -0.66
HCFC2-204ENST00000550335 EVI5O60447 810 aa10.94□□□□□ -0.66
HCFC2-204ENST00000550335 TMEM92Q6UXU6 159 aa10.94□□□□□ -0.66
HCFC2-204ENST00000550335 TTLL12Q14166 644 aaPredicted RBP10.93□□□□□ -0.66
HCFC2-204ENST00000550335 HIC1Q14526 733 aa10.93□□□□□ -0.66
HCFC2-204ENST00000550335 OXER1Q8TDS5 423 aa10.93□□□□□ -0.66
HCFC2-204ENST00000550335 ZMYND15Q9H091 742 aa10.91□□□□□ -0.66
HCFC2-204ENST00000550335 PTGER2P43116 358 aa10.9□□□□□ -0.66
HCFC2-204ENST00000550335 DDRGK1Q96HY6 314 aa10.9□□□□□ -0.66
HCFC2-204ENST00000550335 POTEHQ6S545 545 aa10.89□□□□□ -0.67
HCFC2-204ENST00000550335 PARP9Q8IXQ6 854 aa10.89□□□□□ -0.67
HCFC2-204ENST00000550335 DCBLD2Q96PD2 775 aa10.89□□□□□ -0.67
HCFC2-204ENST00000550335 PRIM1P49642 420 aaKnown RBP10.88□□□□□ -0.67
HCFC2-204ENST00000550335 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
HCFC2-204ENST00000550335 PLEKHG3A1L390 1219 aa10.87□□□□□ -0.67
HCFC2-204ENST00000550335 AMHR2Q16671 573 aa10.87□□□□□ -0.67
HCFC2-204ENST00000550335 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
HCFC2-204ENST00000550335 RBM33Q96EV2 1170 aaKnown RBP10.85□□□□□ -0.67
HCFC2-204ENST00000550335 PTGDRQ13258 359 aa10.84□□□□□ -0.67
HCFC2-204ENST00000550335 C3orf67Q6ZVT6 689 aa10.84□□□□□ -0.67
HCFC2-204ENST00000550335 RSPH6AQ9H0K4 717 aa10.84□□□□□ -0.67
HCFC2-204ENST00000550335 ATP1B4Q9UN42 357 aaPredicted RBP10.84□□□□□ -0.67
HCFC2-204ENST00000550335 GABBR2O75899 941 aa10.83□□□□□ -0.68
HCFC2-204ENST00000550335 MAP3K7O43318 606 aa10.81□□□□□ -0.68
HCFC2-204ENST00000550335 ARID3AQ99856 593 aa10.81□□□□□ -0.68
HCFC2-204ENST00000550335 GIGYF2Q6Y7W6 1299 aaKnown RBP10.8□□□□□ -0.68
HCFC2-204ENST00000550335 CDHR5Q9HBB8 845 aa10.8□□□□□ -0.68
HCFC2-204ENST00000550335 PTCD2Q8WV60 388 aaKnown RBP10.79□□□□□ -0.68
HCFC2-204ENST00000550335 SLC39A7Q92504 469 aa10.78□□□□□ -0.68
HCFC2-204ENST00000550335 MS4A1P11836 297 aa10.77□□□□□ -0.69
HCFC2-204ENST00000550335 PCMTD1Q96MG8 357 aaPredicted RBP10.77□□□□□ -0.69
HCFC2-204ENST00000550335 REPIN1Q9BWE0 567 aaKnown RBP10.76□□□□□ -0.69
HCFC2-204ENST00000550335 PHF14O94880 888 aa10.75□□□□□ -0.69
HCFC2-204ENST00000550335 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
HCFC2-204ENST00000550335 EN1Q05925 392 aaPredicted RBP10.75□□□□□ -0.69
HCFC2-204ENST00000550335 EPAS1Q99814 870 aa10.75□□□□□ -0.69
HCFC2-204ENST00000550335 ANO8Q9HCE9 1232 aaPredicted RBP10.75□□□□□ -0.69
HCFC2-204ENST00000550335 POTEFA5A3E0 1075 aa10.74□□□□□ -0.69
HCFC2-204ENST00000550335 C7P10643 843 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms