RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 LMTK3Q96Q04 1460 aa20.96■□□□□ 0.95
LETMD1-222ENST00000550274 FER1L4A9Z1Z3 1794 aa20.95■□□□□ 0.94
LETMD1-222ENST00000550274 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
LETMD1-222ENST00000550274 PLCH2O75038 1416 aa20.94■□□□□ 0.94
LETMD1-222ENST00000550274 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
LETMD1-222ENST00000550274 POGZQ7Z3K3 1410 aa20.93■□□□□ 0.94
LETMD1-222ENST00000550274 MAGI2Q86UL8 1455 aa20.93■□□□□ 0.94
LETMD1-222ENST00000550274 SCAPERQ9BY12 1400 aa20.91■□□□□ 0.94
LETMD1-222ENST00000550274 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
LETMD1-222ENST00000550274 CDC42BPBQ9Y5S2 1711 aa20.86■□□□□ 0.93
LETMD1-222ENST00000550274 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
LETMD1-222ENST00000550274 PLPPR3Q6T4P5 718 aa20.83■□□□□ 0.93
LETMD1-222ENST00000550274 ARHGAP5Q13017 1502 aa20.83■□□□□ 0.92
LETMD1-222ENST00000550274 MLECQ14165 292 aa20.82■□□□□ 0.92
LETMD1-222ENST00000550274 ARHGEF12Q9NZN5 1544 aa20.82■□□□□ 0.92
LETMD1-222ENST00000550274 ATP10AO60312 1499 aa20.81■□□□□ 0.92
LETMD1-222ENST00000550274 KDM5CP41229 1560 aa20.81■□□□□ 0.92
LETMD1-222ENST00000550274 C9orf84Q5VXU9 1444 aa20.81■□□□□ 0.92
LETMD1-222ENST00000550274 EFCAB2Q5VUJ9 269 aa20.81■□□□□ 0.92
LETMD1-222ENST00000550274 FBXO41Q8TF61 875 aa20.81■□□□□ 0.92
LETMD1-222ENST00000550274 HSPA2P54652 639 aa20.8■□□□□ 0.92
LETMD1-222ENST00000550274 CDK11AQ9UQ88 783 aaPredicted RBP20.8■□□□□ 0.92
LETMD1-222ENST00000550274 PREX2Q70Z35 1606 aa20.79■□□□□ 0.92
LETMD1-222ENST00000550274 ZNF518AQ6AHZ1 1483 aa20.79■□□□□ 0.92
LETMD1-222ENST00000550274 CLIP1P30622 1438 aa20.78■□□□□ 0.92
LETMD1-222ENST00000550274 PREX1Q8TCU6 1659 aa20.78■□□□□ 0.92
LETMD1-222ENST00000550274 DIP2CQ9Y2E4 1556 aa20.77■□□□□ 0.92
LETMD1-222ENST00000550274 CDC42BPAQ5VT25 1732 aa20.76■□□□□ 0.91
LETMD1-222ENST00000550274 ABCA6Q8N139 1617 aa20.76■□□□□ 0.91
LETMD1-222ENST00000550274 ITSN2Q9NZM3 1697 aa20.76■□□□□ 0.91
LETMD1-222ENST00000550274 AFAP1Q8N556 730 aa20.73■□□□□ 0.91
LETMD1-222ENST00000550274 ABCC1P33527 1531 aa20.73■□□□□ 0.91
LETMD1-222ENST00000550274 CASKIN1Q8WXD9 1431 aa20.72■□□□□ 0.91
LETMD1-222ENST00000550274 CCDC18Q5T9S5 1454 aa20.72■□□□□ 0.91
LETMD1-222ENST00000550274 REREQ9P2R6 1566 aa20.72■□□□□ 0.91
LETMD1-222ENST00000550274 SETD1BQ9UPS6 1966 aaKnown RBP20.69■□□□□ 0.9
LETMD1-222ENST00000550274 C3P01024 1663 aa20.69■□□□□ 0.9
LETMD1-222ENST00000550274 KIDINS220Q9ULH0 1771 aa20.69■□□□□ 0.9
LETMD1-222ENST00000550274 MLH3Q9UHC1 1453 aa20.68■□□□□ 0.9
LETMD1-222ENST00000550274 STRCQ7RTU9 1775 aa20.67■□□□□ 0.9
LETMD1-222ENST00000550274 CEBPAP49715 358 aaPredicted RBP20.67■□□□□ 0.9
LETMD1-222ENST00000550274 TRAPPC8Q9Y2L5 1435 aa20.67■□□□□ 0.9
LETMD1-222ENST00000550274 FYCO1Q9BQS8 1478 aa20.65■□□□□ 0.9
LETMD1-222ENST00000550274 MYT1LQ9UL68 1186 aa20.64■□□□□ 0.89
LETMD1-222ENST00000550274 AGLP35573 1532 aa20.63■□□□□ 0.89
LETMD1-222ENST00000550274 SAMD9LQ8IVG5 1584 aa20.62■□□□□ 0.89
LETMD1-222ENST00000550274 UHRF1BP1Q6BDS2 1440 aa20.58■□□□□ 0.88
LETMD1-222ENST00000550274 SYCP2Q9BX26 1530 aa20.58■□□□□ 0.88
LETMD1-222ENST00000550274 SUPT6HQ7KZ85 1726 aaKnown RBP20.56■□□□□ 0.88
LETMD1-222ENST00000550274 CERKQ8TCT0 537 aa20.56■□□□□ 0.88
LETMD1-222ENST00000550274 GPATCH8Q9UKJ3 1502 aaKnown RBP20.55■□□□□ 0.88
LETMD1-222ENST00000550274 MROH2AA6NES4 1674 aa20.54■□□□□ 0.88
LETMD1-222ENST00000550274 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
LETMD1-222ENST00000550274 ZNF777Q9ULD5 760 aaPredicted RBP20.51■□□□□ 0.87
LETMD1-222ENST00000550274 ATP7AQ04656 1500 aa20.5■□□□□ 0.87
LETMD1-222ENST00000550274 CLTCQ00610 1675 aaKnown RBP20.48■□□□□ 0.87
LETMD1-222ENST00000550274 PLXNC1O60486 1568 aa20.48■□□□□ 0.87
LETMD1-222ENST00000550274 CNTLNQ9NXG0 1405 aa20.47■□□□□ 0.87
LETMD1-222ENST00000550274 ESF1Q9H501 851 aaKnown RBP20.47■□□□□ 0.87
LETMD1-222ENST00000550274 HNRNPMP52272 730 aaKnown RBP eCLIP20.46■□□□□ 0.87
LETMD1-222ENST00000550274 TIAM1Q13009 1591 aa20.45■□□□□ 0.86
LETMD1-222ENST00000550274 SPAG9O60271 1321 aaKnown RBP20.45■□□□□ 0.86
LETMD1-222ENST00000550274 KIAA1107Q9UPP5 1409 aa20.44■□□□□ 0.86
LETMD1-222ENST00000550274 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
LETMD1-222ENST00000550274 ADGBQ8N7X0 1667 aa20.44■□□□□ 0.86
LETMD1-222ENST00000550274 PLEKHH2Q8IVE3 1493 aa20.43■□□□□ 0.86
LETMD1-222ENST00000550274 CCNB3Q8WWL7 1395 aa20.43■□□□□ 0.86
LETMD1-222ENST00000550274 PTPRTO14522 1441 aa20.43■□□□□ 0.86
LETMD1-222ENST00000550274 CFDP1Q9UEE9 299 aaPredicted RBP20.42■□□□□ 0.86
LETMD1-222ENST00000550274 MTUS2Q5JR59 1369 aa20.41■□□□□ 0.86
LETMD1-222ENST00000550274 NCOA1Q15788 1441 aa20.41■□□□□ 0.86
LETMD1-222ENST00000550274 A2MP01023 1474 aa20.41■□□□□ 0.86
LETMD1-222ENST00000550274 MYO3AQ8NEV4 1616 aa20.41■□□□□ 0.86
LETMD1-222ENST00000550274 ZNF142P52746 1687 aaPredicted RBP20.41■□□□□ 0.86
LETMD1-222ENST00000550274 NPATQ14207 1427 aa20.4■□□□□ 0.86
LETMD1-222ENST00000550274 CAMSAP1Q5T5Y3 1602 aa20.4■□□□□ 0.86
LETMD1-222ENST00000550274 EHBP1L1Q8N3D4 1523 aa20.4■□□□□ 0.86
LETMD1-222ENST00000550274 LTBP4Q8N2S1 1624 aa20.38■□□□□ 0.85
LETMD1-222ENST00000550274 ZMYM3Q14202 1370 aa20.38■□□□□ 0.85
LETMD1-222ENST00000550274 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
LETMD1-222ENST00000550274 MBD5Q9P267 1494 aa20.35■□□□□ 0.85
LETMD1-222ENST00000550274 CEP170BQ9Y4F5 1589 aaPredicted RBP20.33■□□□□ 0.84
LETMD1-222ENST00000550274 PTPRKQ15262 1439 aa20.32■□□□□ 0.84
LETMD1-222ENST00000550274 CEP162Q5TB80 1403 aa20.32■□□□□ 0.84
LETMD1-222ENST00000550274 GGT6Q6P531 493 aa20.3■□□□□ 0.84
LETMD1-222ENST00000550274 IQSEC2Q5JU85 1478 aa20.27■□□□□ 0.84
LETMD1-222ENST00000550274 RTEL1-TNFRSF6BF6WH68 1400 aa20.27■□□□□ 0.83
LETMD1-222ENST00000550274 PLA2R1Q13018 1463 aa20.26■□□□□ 0.83
LETMD1-222ENST00000550274 NCKAP5LQ9HCH0 1330 aa20.26■□□□□ 0.83
LETMD1-222ENST00000550274 CAMSAP2Q08AD1 1489 aa20.25■□□□□ 0.83
LETMD1-222ENST00000550274 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
LETMD1-222ENST00000550274 TCOF1Q13428 1488 aaKnown RBP20.24■□□□□ 0.83
LETMD1-222ENST00000550274 CCDC141Q6ZP82 1450 aa20.24■□□□□ 0.83
LETMD1-222ENST00000550274 POLR1AO95602 1720 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-222ENST00000550274 DNMT1P26358 1616 aaKnown RBP20.24■□□□□ 0.83
LETMD1-222ENST00000550274 DHX29Q7Z478 1369 aaKnown RBP20.22■□□□□ 0.83
LETMD1-222ENST00000550274 PPP6R1Q9UPN7 881 aa20.21■□□□□ 0.83
LETMD1-222ENST00000550274 ZNF335Q9H4Z2 1342 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-222ENST00000550274 A2ML1A8K2U0 1454 aa20.2■□□□□ 0.82
LETMD1-222ENST00000550274 ARHGEF5Q12774 1597 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms