RNA–Protein interactions for RNA: ENST00000550185.5

LINC02401-201, Transcript of long intergenic non-protein coding RNA 2401, humanhuman

TSL 1 (best) BASIC

Gene LINC02401, Length 3,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02401-201ENST00000550185 ABCC1P33527 1531 aa9.1□□□□□ -0.95
LINC02401-201ENST00000550185 TCOF1Q13428 1488 aaKnown RBP9.09□□□□□ -0.95
LINC02401-201ENST00000550185 SAMD9LQ8IVG5 1584 aa9.08□□□□□ -0.96
LINC02401-201ENST00000550185 NPM1P06748 294 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC02401-201ENST00000550185 KIAA1107Q9UPP5 1409 aa9.06□□□□□ -0.96
LINC02401-201ENST00000550185 INO80Q9ULG1 1556 aaPredicted RBP9.06□□□□□ -0.96
LINC02401-201ENST00000550185 GPATCH8Q9UKJ3 1502 aaKnown RBP9.06□□□□□ -0.96
LINC02401-201ENST00000550185 KDM6BO15054 1643 aa9.06□□□□□ -0.96
LINC02401-201ENST00000550185 PLEKHH2Q8IVE3 1493 aa9.06□□□□□ -0.96
LINC02401-201ENST00000550185 MAGI2Q86UL8 1455 aa9.05□□□□□ -0.96
LINC02401-201ENST00000550185 CD109Q6YHK3 1445 aa9.05□□□□□ -0.96
LINC02401-201ENST00000550185 MIA2Q96PC5 1412 aa9.05□□□□□ -0.96
LINC02401-201ENST00000550185 TSPOAP1O95153 1857 aa9.05□□□□□ -0.96
LINC02401-201ENST00000550185 ARHGEF40Q8TER5 1519 aa9.04□□□□□ -0.96
LINC02401-201ENST00000550185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.04□□□□□ -0.96
LINC02401-201ENST00000550185 NCOA2Q15596 1464 aa9.03□□□□□ -0.96
LINC02401-201ENST00000550185 LOC105371045A0A1W2PR82 267 aa9.03□□□□□ -0.96
LINC02401-201ENST00000550185 FAM135AQ9P2D6 1515 aa9.03□□□□□ -0.96
LINC02401-201ENST00000550185 PLXNC1O60486 1568 aa9.03□□□□□ -0.96
LINC02401-201ENST00000550185 ADGBQ8N7X0 1667 aa9.02□□□□□ -0.96
LINC02401-201ENST00000550185 CDK11AQ9UQ88 783 aaPredicted RBP9.02□□□□□ -0.97
LINC02401-201ENST00000550185 SHANK2Q9UPX8 1470 aa9.02□□□□□ -0.97
LINC02401-201ENST00000550185 P3H3Q8IVL6 736 aa9.01□□□□□ -0.97
LINC02401-201ENST00000550185 DNMT1P26358 1616 aaKnown RBP9.01□□□□□ -0.97
LINC02401-201ENST00000550185 POGZQ7Z3K3 1410 aa9.01□□□□□ -0.97
LINC02401-201ENST00000550185 MLH3Q9UHC1 1453 aa9.01□□□□□ -0.97
LINC02401-201ENST00000550185 HECW2Q9P2P5 1572 aa9.01□□□□□ -0.97
LINC02401-201ENST00000550185 FANCAO15360 1455 aa9.01□□□□□ -0.97
LINC02401-201ENST00000550185 PLEKHD1A6NEE1 506 aa9.01□□□□□ -0.97
LINC02401-201ENST00000550185 AKNAQ7Z591 1439 aa9□□□□□ -0.97
LINC02401-201ENST00000550185 KIDINS220Q9ULH0 1771 aa9□□□□□ -0.97
LINC02401-201ENST00000550185 MBD5Q9P267 1494 aa9□□□□□ -0.97
LINC02401-201ENST00000550185 EIF2AK4Q9P2K8 1649 aaKnown RBP9□□□□□ -0.97
LINC02401-201ENST00000550185 AGLP35573 1532 aa9□□□□□ -0.97
LINC02401-201ENST00000550185 PTPN23Q9H3S7 1636 aa9□□□□□ -0.97
LINC02401-201ENST00000550185 RTEL1-TNFRSF6BF6WH68 1400 aa8.99□□□□□ -0.97
LINC02401-201ENST00000550185 COL17A1Q9UMD9 1497 aaPredicted RBP8.99□□□□□ -0.97
LINC02401-201ENST00000550185 ARHGEF12Q9NZN5 1544 aa8.99□□□□□ -0.97
LINC02401-201ENST00000550185 MYOM3Q5VTT5 1437 aa8.99□□□□□ -0.97
LINC02401-201ENST00000550185 DIP2CQ9Y2E4 1556 aa8.98□□□□□ -0.97
LINC02401-201ENST00000550185 ABCA6Q8N139 1617 aa8.98□□□□□ -0.97
LINC02401-201ENST00000550185 ZFYVE16Q7Z3T8 1539 aa8.98□□□□□ -0.97
LINC02401-201ENST00000550185 ARHGAP5Q13017 1502 aa8.97□□□□□ -0.97
LINC02401-201ENST00000550185 ZNF518AQ6AHZ1 1483 aa8.97□□□□□ -0.97
LINC02401-201ENST00000550185 SIGLEC1Q9BZZ2 1709 aa8.97□□□□□ -0.97
LINC02401-201ENST00000550185 FAM69CQ0P6D2 419 aa8.97□□□□□ -0.97
LINC02401-201ENST00000550185 ADGRL2O95490 1459 aa8.97□□□□□ -0.97
LINC02401-201ENST00000550185 CAMSAP2Q08AD1 1489 aa8.97□□□□□ -0.97
LINC02401-201ENST00000550185 ADAMTSL3P82987 1691 aa8.97□□□□□ -0.97
LINC02401-201ENST00000550185 RNF17Q9BXT8 1623 aaKnown RBP8.97□□□□□ -0.97
LINC02401-201ENST00000550185 DENND4BO75064 1496 aaPredicted RBP8.96□□□□□ -0.97
LINC02401-201ENST00000550185 MROH2AA6NES4 1674 aa8.96□□□□□ -0.97
LINC02401-201ENST00000550185 DEPDC5O75140 1603 aa8.96□□□□□ -0.98
LINC02401-201ENST00000550185 RRBP1Q9P2E9 1410 aaKnown RBP8.96□□□□□ -0.98
LINC02401-201ENST00000550185 ADGRL1O94910 1474 aa8.95□□□□□ -0.98
LINC02401-201ENST00000550185 TIMELESSQ9UNS1 1208 aa8.95□□□□□ -0.98
LINC02401-201ENST00000550185 ARXQ96QS3 562 aa8.94□□□□□ -0.98
LINC02401-201ENST00000550185 SYCP2Q9BX26 1530 aa8.94□□□□□ -0.98
LINC02401-201ENST00000550185 MTUS2Q5JR59 1369 aa8.94□□□□□ -0.98
LINC02401-201ENST00000550185 ATP7AQ04656 1500 aa8.93□□□□□ -0.98
LINC02401-201ENST00000550185 ZC3H13Q5T200 1668 aaKnown RBP8.93□□□□□ -0.98
LINC02401-201ENST00000550185 GCC2Q8IWJ2 1684 aa8.93□□□□□ -0.98
LINC02401-201ENST00000550185 FGD6Q6ZV73 1430 aa8.93□□□□□ -0.98
LINC02401-201ENST00000550185 CCDC141Q6ZP82 1450 aa8.92□□□□□ -0.98
LINC02401-201ENST00000550185 KDM5DQ9BY66 1539 aa8.92□□□□□ -0.98
LINC02401-201ENST00000550185 CCNB3Q8WWL7 1395 aa8.92□□□□□ -0.98
LINC02401-201ENST00000550185 VWDEQ8N2E2 1590 aa8.91□□□□□ -0.98
LINC02401-201ENST00000550185 RSPH4AQ5TD94 716 aa8.91□□□□□ -0.98
LINC02401-201ENST00000550185 EFCAB2Q5VUJ9 269 aa8.9□□□□□ -0.98
LINC02401-201ENST00000550185 SLC4A1APQ9BWU0 796 aaKnown RBP8.9□□□□□ -0.98
LINC02401-201ENST00000550185 ATP10AO60312 1499 aa8.9□□□□□ -0.99
LINC02401-201ENST00000550185 UNC13BO14795 1591 aa8.89□□□□□ -0.99
LINC02401-201ENST00000550185 C9orf84Q5VXU9 1444 aa8.89□□□□□ -0.99
LINC02401-201ENST00000550185 SCAPERQ9BY12 1400 aa8.89□□□□□ -0.99
LINC02401-201ENST00000550185 MROH1Q8NDA8 1641 aa8.89□□□□□ -0.99
LINC02401-201ENST00000550185 TRAPPC8Q9Y2L5 1435 aa8.89□□□□□ -0.99
LINC02401-201ENST00000550185 KANK4Q5T7N3 995 aaPredicted RBP8.89□□□□□ -0.99
LINC02401-201ENST00000550185 ROCK1Q13464 1354 aa8.88□□□□□ -0.99
LINC02401-201ENST00000550185 DUOX2Q9NRD8 1548 aa8.87□□□□□ -0.99
LINC02401-201ENST00000550185 LMTK2Q8IWU2 1503 aa8.87□□□□□ -0.99
LINC02401-201ENST00000550185 ABCC5O15440 1437 aa8.87□□□□□ -0.99
LINC02401-201ENST00000550185 DAPK1P53355 1430 aa8.87□□□□□ -0.99
LINC02401-201ENST00000550185 TAOK2Q9UL54 1235 aa8.87□□□□□ -0.99
LINC02401-201ENST00000550185 PRDM15P57071 1507 aaPredicted RBP8.86□□□□□ -0.99
LINC02401-201ENST00000550185 ERBINQ96RT1 1412 aa8.86□□□□□ -0.99
LINC02401-201ENST00000550185 FER1L4A9Z1Z3 1794 aa8.84□□□□□ -0.99
LINC02401-201ENST00000550185 KDM5AP29375 1690 aaKnown RBP8.84□□□□□ -0.99
LINC02401-201ENST00000550185 KCNH8Q96L42 1107 aa8.83□□□□□ -1
LINC02401-201ENST00000550185 TRHP20396 242 aaPredicted RBP8.83□□□□□ -1
LINC02401-201ENST00000550185 IQGAP3Q86VI3 1631 aa8.83□□□□□ -1
LINC02401-201ENST00000550185 ZNF142P52746 1687 aaPredicted RBP8.82□□□□□ -1
LINC02401-201ENST00000550185 RANGAP1P46060 587 aaPredicted RBP8.82□□□□□ -1
LINC02401-201ENST00000550185 A2MP01023 1474 aa8.82□□□□□ -1
LINC02401-201ENST00000550185 YEATS2Q9ULM3 1422 aa8.82□□□□□ -1
LINC02401-201ENST00000550185 TTBK1Q5TCY1 1321 aaPredicted RBP8.82□□□□□ -1
LINC02401-201ENST00000550185 DHX29Q7Z478 1369 aaKnown RBP8.8□□□□□ -1
LINC02401-201ENST00000550185 PPP6R1Q9UPN7 881 aa8.8□□□□□ -1
LINC02401-201ENST00000550185 CFDP1Q9UEE9 299 aaPredicted RBP8.8□□□□□ -1
LINC02401-201ENST00000550185 C3P01024 1663 aa8.8□□□□□ -1
LINC02401-201ENST00000550185 CAMSAP1Q5T5Y3 1602 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms