RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 SCAPERQ9BY12 1400 aa25.95■■□□□ 1.74
COX6A1-203ENST00000550009 MADDQ8WXG6 1647 aa25.95■■□□□ 1.74
COX6A1-203ENST00000550009 CDC42BPAQ5VT25 1732 aa25.92■■□□□ 1.74
COX6A1-203ENST00000550009 CDK11AQ9UQ88 783 aaPredicted RBP25.92■■□□□ 1.74
COX6A1-203ENST00000550009 ARHGAP5Q13017 1502 aa25.91■■□□□ 1.74
COX6A1-203ENST00000550009 FYCO1Q9BQS8 1478 aa25.91■■□□□ 1.74
COX6A1-203ENST00000550009 POGZQ7Z3K3 1410 aa25.9■■□□□ 1.74
COX6A1-203ENST00000550009 ZFYVE16Q7Z3T8 1539 aa25.9■■□□□ 1.74
COX6A1-203ENST00000550009 CCDC18Q5T9S5 1454 aa25.9■■□□□ 1.74
COX6A1-203ENST00000550009 ARID4BQ4LE39 1312 aaPredicted RBP25.89■■□□□ 1.74
COX6A1-203ENST00000550009 RIMS1Q86UR5 1692 aaKnown RBP25.89■■□□□ 1.73
COX6A1-203ENST00000550009 PREX2Q70Z35 1606 aa25.88■■□□□ 1.73
COX6A1-203ENST00000550009 PTPRMP28827 1452 aa25.86■■□□□ 1.73
COX6A1-203ENST00000550009 EFCAB2Q5VUJ9 269 aa25.86■■□□□ 1.73
COX6A1-203ENST00000550009 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.72
COX6A1-203ENST00000550009 AFAP1Q8N556 730 aa25.82■■□□□ 1.72
COX6A1-203ENST00000550009 ITSN2Q9NZM3 1697 aa25.81■■□□□ 1.72
COX6A1-203ENST00000550009 LOC105371045A0A1W2PR82 267 aa25.81■■□□□ 1.72
COX6A1-203ENST00000550009 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
COX6A1-203ENST00000550009 KDM5CP41229 1560 aa25.78■■□□□ 1.72
COX6A1-203ENST00000550009 ABCC1P33527 1531 aa25.78■■□□□ 1.72
COX6A1-203ENST00000550009 MLECQ14165 292 aa25.77■■□□□ 1.72
COX6A1-203ENST00000550009 MAGI2Q86UL8 1455 aa25.77■■□□□ 1.72
COX6A1-203ENST00000550009 FER1L4A9Z1Z3 1794 aa25.77■■□□□ 1.72
COX6A1-203ENST00000550009 TRAPPC8Q9Y2L5 1435 aa25.76■■□□□ 1.71
COX6A1-203ENST00000550009 ABCA6Q8N139 1617 aa25.75■■□□□ 1.71
COX6A1-203ENST00000550009 PLPPR3Q6T4P5 718 aa25.75■■□□□ 1.71
COX6A1-203ENST00000550009 SAMD9LQ8IVG5 1584 aa25.74■■□□□ 1.71
COX6A1-203ENST00000550009 ZNF518AQ6AHZ1 1483 aa25.73■■□□□ 1.71
COX6A1-203ENST00000550009 DIP2CQ9Y2E4 1556 aa25.73■■□□□ 1.71
COX6A1-203ENST00000550009 ATP10AO60312 1499 aa25.72■■□□□ 1.71
COX6A1-203ENST00000550009 GPATCH8Q9UKJ3 1502 aaKnown RBP25.71■■□□□ 1.71
COX6A1-203ENST00000550009 KIDINS220Q9ULH0 1771 aa25.7■■□□□ 1.7
COX6A1-203ENST00000550009 C9orf84Q5VXU9 1444 aa25.69■■□□□ 1.7
COX6A1-203ENST00000550009 ZNF777Q9ULD5 760 aaPredicted RBP25.68■■□□□ 1.7
COX6A1-203ENST00000550009 SYCP2Q9BX26 1530 aa25.67■■□□□ 1.7
COX6A1-203ENST00000550009 MYT1LQ9UL68 1186 aa25.64■■□□□ 1.7
COX6A1-203ENST00000550009 TIAM1Q13009 1591 aa25.63■■□□□ 1.69
COX6A1-203ENST00000550009 LMTK3Q96Q04 1460 aa25.62■■□□□ 1.69
COX6A1-203ENST00000550009 MTUS2Q5JR59 1369 aa25.62■■□□□ 1.69
COX6A1-203ENST00000550009 MLH3Q9UHC1 1453 aa25.61■■□□□ 1.69
COX6A1-203ENST00000550009 HNRNPMP52272 730 aaKnown RBP eCLIP25.61■■□□□ 1.69
COX6A1-203ENST00000550009 ZNF644Q9H582 1327 aaPredicted RBP25.58■■□□□ 1.69
COX6A1-203ENST00000550009 EHBP1L1Q8N3D4 1523 aa25.58■■□□□ 1.68
COX6A1-203ENST00000550009 CCNB3Q8WWL7 1395 aa25.57■■□□□ 1.68
COX6A1-203ENST00000550009 CEBPAP49715 358 aaPredicted RBP25.57■■□□□ 1.68
COX6A1-203ENST00000550009 REREQ9P2R6 1566 aa25.56■■□□□ 1.68
COX6A1-203ENST00000550009 SUPT6HQ7KZ85 1726 aaKnown RBP25.55■■□□□ 1.68
COX6A1-203ENST00000550009 HSPA2P54652 639 aa25.54■■□□□ 1.68
COX6A1-203ENST00000550009 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
COX6A1-203ENST00000550009 C3P01024 1663 aa25.51■■□□□ 1.67
COX6A1-203ENST00000550009 INO80Q9ULG1 1556 aaPredicted RBP25.5■■□□□ 1.67
COX6A1-203ENST00000550009 ATP7AQ04656 1500 aa25.48■■□□□ 1.67
COX6A1-203ENST00000550009 ILDR1Q86SU0 546 aaPredicted RBP25.48■■□□□ 1.67
COX6A1-203ENST00000550009 AGLP35573 1532 aa25.47■■□□□ 1.67
COX6A1-203ENST00000550009 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
COX6A1-203ENST00000550009 VPS8Q8N3P4 1428 aa25.46■■□□□ 1.67
COX6A1-203ENST00000550009 SPAG9O60271 1321 aaKnown RBP25.46■■□□□ 1.67
COX6A1-203ENST00000550009 KIAA1107Q9UPP5 1409 aa25.46■■□□□ 1.67
COX6A1-203ENST00000550009 PREX1Q8TCU6 1659 aa25.44■■□□□ 1.66
COX6A1-203ENST00000550009 MBD5Q9P267 1494 aa25.43■■□□□ 1.66
COX6A1-203ENST00000550009 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
COX6A1-203ENST00000550009 KANK4Q5T7N3 995 aaPredicted RBP25.41■■□□□ 1.66
COX6A1-203ENST00000550009 PLXNC1O60486 1568 aa25.4■■□□□ 1.66
COX6A1-203ENST00000550009 ADGBQ8N7X0 1667 aa25.4■■□□□ 1.66
COX6A1-203ENST00000550009 SETD1BQ9UPS6 1966 aaKnown RBP25.39■■□□□ 1.66
COX6A1-203ENST00000550009 LRRC9Q6ZRR7 1453 aa25.38■■□□□ 1.65
COX6A1-203ENST00000550009 CLTCQ00610 1675 aaKnown RBP25.37■■□□□ 1.65
COX6A1-203ENST00000550009 CAMSAP2Q08AD1 1489 aa25.37■■□□□ 1.65
COX6A1-203ENST00000550009 STRCQ7RTU9 1775 aa25.36■■□□□ 1.65
COX6A1-203ENST00000550009 A2MP01023 1474 aa25.35■■□□□ 1.65
COX6A1-203ENST00000550009 MROH2AA6NES4 1674 aa25.3■■□□□ 1.64
COX6A1-203ENST00000550009 CCDC141Q6ZP82 1450 aa25.27■■□□□ 1.64
COX6A1-203ENST00000550009 GGT6Q6P531 493 aa25.25■■□□□ 1.63
COX6A1-203ENST00000550009 ESF1Q9H501 851 aaKnown RBP25.25■■□□□ 1.63
COX6A1-203ENST00000550009 MAP3K1Q13233 1512 aa25.25■■□□□ 1.63
COX6A1-203ENST00000550009 UHRF1BP1Q6BDS2 1440 aa25.24■■□□□ 1.63
COX6A1-203ENST00000550009 ARHGEF5Q12774 1597 aa25.22■■□□□ 1.63
COX6A1-203ENST00000550009 RTEL1-TNFRSF6BF6WH68 1400 aa25.22■■□□□ 1.63
COX6A1-203ENST00000550009 ZMYM3Q14202 1370 aa25.22■■□□□ 1.63
COX6A1-203ENST00000550009 CNTLNQ9NXG0 1405 aa25.21■■□□□ 1.63
COX6A1-203ENST00000550009 DHX29Q7Z478 1369 aaKnown RBP25.18■■□□□ 1.62
COX6A1-203ENST00000550009 MYOM3Q5VTT5 1437 aa25.17■■□□□ 1.62
COX6A1-203ENST00000550009 MYO3AQ8NEV4 1616 aa25.15■■□□□ 1.62
COX6A1-203ENST00000550009 PTPRKQ15262 1439 aa25.13■■□□□ 1.61
COX6A1-203ENST00000550009 KIF3BO15066 747 aa25.13■■□□□ 1.61
COX6A1-203ENST00000550009 MAST1Q9Y2H9 1570 aa25.11■■□□□ 1.61
COX6A1-203ENST00000550009 CFAP65Q6ZU64 1925 aaKnown RBP25.1■■□□□ 1.61
COX6A1-203ENST00000550009 PTPN23Q9H3S7 1636 aa25.1■■□□□ 1.61
COX6A1-203ENST00000550009 NPATQ14207 1427 aa25.1■■□□□ 1.61
COX6A1-203ENST00000550009 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
COX6A1-203ENST00000550009 CAMSAP1Q5T5Y3 1602 aa25.09■■□□□ 1.61
COX6A1-203ENST00000550009 ZNF142P52746 1687 aaPredicted RBP25.09■■□□□ 1.61
COX6A1-203ENST00000550009 FBXO41Q8TF61 875 aa25.08■■□□□ 1.61
COX6A1-203ENST00000550009 MIA2Q96PC5 1412 aa25.07■■□□□ 1.6
COX6A1-203ENST00000550009 RSPH4AQ5TD94 716 aa25.07■■□□□ 1.6
COX6A1-203ENST00000550009 TSPY4P0CV99 314 aa25.06■■□□□ 1.6
COX6A1-203ENST00000550009 TSPY10P0CW01 314 aa25.06■■□□□ 1.6
COX6A1-203ENST00000550009 FBXO31Q5XUX0 539 aaPredicted RBP25.06■■□□□ 1.6
COX6A1-203ENST00000550009 CEP170BQ9Y4F5 1589 aaPredicted RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms