RNA–Protein interactions for RNA: ENST00000549947.1

CNOT2-221, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-221ENST00000549947 TSHZ2Q9NRE2 1034 aa16.45■□□□□ 0.22
CNOT2-221ENST00000549947 SLAIN1Q8ND83 568 aa16.4■□□□□ 0.22
CNOT2-221ENST00000549947 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
CNOT2-221ENST00000549947 KIF3CO14782 793 aa16.37■□□□□ 0.21
CNOT2-221ENST00000549947 C2orf72A6NCS6 295 aa16.36■□□□□ 0.21
CNOT2-221ENST00000549947 CRISPLD2Q9H0B8 497 aa16.35■□□□□ 0.21
CNOT2-221ENST00000549947 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
CNOT2-221ENST00000549947 TMC2Q8TDI7 906 aa16.3■□□□□ 0.2
CNOT2-221ENST00000549947 GPHNQ9NQX3 736 aaPredicted RBP16.3■□□□□ 0.2
CNOT2-221ENST00000549947 PDE4AP27815 886 aa16.25■□□□□ 0.19
CNOT2-221ENST00000549947 DSG2Q14126 1118 aa16.25■□□□□ 0.19
CNOT2-221ENST00000549947 LARP6Q9BRS8 491 aaKnown RBP16.25■□□□□ 0.19
CNOT2-221ENST00000549947 FOXK1P85037 733 aa16.22■□□□□ 0.19
CNOT2-221ENST00000549947 MFSD10Q14728 455 aa16.21■□□□□ 0.19
CNOT2-221ENST00000549947 PPP1R15BQ5SWA1 713 aa16.18■□□□□ 0.18
CNOT2-221ENST00000549947 DDX27Q96GQ7 796 aaKnown RBP16.18■□□□□ 0.18
CNOT2-221ENST00000549947 PLPP6Q8IY26 295 aa16.17■□□□□ 0.18
CNOT2-221ENST00000549947 HOXB3P14651 431 aaPredicted RBP16.16■□□□□ 0.18
CNOT2-221ENST00000549947 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
CNOT2-221ENST00000549947 SNPHO15079 494 aa16.04■□□□□ 0.16
CNOT2-221ENST00000549947 DOK7Q18PE1 504 aa16.04■□□□□ 0.16
CNOT2-221ENST00000549947 VSIG10Q8N0Z9 540 aa16.04■□□□□ 0.16
CNOT2-221ENST00000549947 WDR70Q9NW82 654 aa16.04■□□□□ 0.16
CNOT2-221ENST00000549947 LCE2DQ5TA82 110 aaPredicted RBP16.03■□□□□ 0.16
CNOT2-221ENST00000549947 CAMK2BQ13554 666 aa16.02■□□□□ 0.16
CNOT2-221ENST00000549947 EMILIN3Q9NT22 766 aa16.02■□□□□ 0.16
CNOT2-221ENST00000549947 SLC34A2O95436 690 aa16.01■□□□□ 0.15
CNOT2-221ENST00000549947 FAM163AQ96GL9 167 aaPredicted RBP16■□□□□ 0.15
CNOT2-221ENST00000549947 ST18O60284 1047 aa15.99■□□□□ 0.15
CNOT2-221ENST00000549947 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
CNOT2-221ENST00000549947 UPF1Q92900 1129 aaKnown RBP eCLIP15.98■□□□□ 0.15
CNOT2-221ENST00000549947 E2F4Q16254 413 aa15.97■□□□□ 0.15
CNOT2-221ENST00000549947 PTCD2Q8WV60 388 aaKnown RBP15.97■□□□□ 0.15
CNOT2-221ENST00000549947 ZNF710Q8N1W2 664 aa15.96■□□□□ 0.15
CNOT2-221ENST00000549947 OXER1Q8TDS5 423 aa15.96■□□□□ 0.15
CNOT2-221ENST00000549947 KHSRPQ92945 711 aaKnown RBP eCLIP15.96■□□□□ 0.153e-6■■□□□ 13.6
CNOT2-221ENST00000549947 GPR153Q6NV75 609 aa15.95■□□□□ 0.14
CNOT2-221ENST00000549947 PCDHGA4Q9Y5G9 962 aa15.95■□□□□ 0.14
CNOT2-221ENST00000549947 ARSIQ5FYB1 569 aa15.93■□□□□ 0.14
CNOT2-221ENST00000549947 KCNV2Q8TDN2 545 aa15.93■□□□□ 0.14
CNOT2-221ENST00000549947 RIMBP2O15034 1052 aa15.92■□□□□ 0.14
CNOT2-221ENST00000549947 ZSWIM6Q9HCJ5 1215 aa15.91■□□□□ 0.14
CNOT2-221ENST00000549947 HOXB1P14653 301 aaPredicted RBP15.89■□□□□ 0.13
CNOT2-221ENST00000549947 DPYSL4O14531 572 aa15.87■□□□□ 0.13
CNOT2-221ENST00000549947 KDM4FA0A1W2PPD8 638 aa15.85■□□□□ 0.13
CNOT2-221ENST00000549947 NUDT7P0C024 238 aa15.85■□□□□ 0.13
CNOT2-221ENST00000549947 MARVELD3Q96A59 401 aa15.85■□□□□ 0.13
CNOT2-221ENST00000549947 MAP3K9P80192 1104 aa15.82■□□□□ 0.12
CNOT2-221ENST00000549947 TBC1D12O60347 775 aa15.81■□□□□ 0.12
CNOT2-221ENST00000549947 ARIH1Q9Y4X5 557 aaPredicted RBP15.81■□□□□ 0.12
CNOT2-221ENST00000549947 EVI5O60447 810 aa15.78■□□□□ 0.12
CNOT2-221ENST00000549947 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
CNOT2-221ENST00000549947 ARHGEF1Q92888 912 aaKnown RBP15.76■□□□□ 0.11
CNOT2-221ENST00000549947 EMP3P54852 163 aa15.75■□□□□ 0.11
CNOT2-221ENST00000549947 PDIA6Q15084 440 aa15.74■□□□□ 0.11
CNOT2-221ENST00000549947 LHX6Q9UPM6 363 aa15.73■□□□□ 0.11
CNOT2-221ENST00000549947 ANO8Q9HCE9 1232 aaPredicted RBP15.72■□□□□ 0.11
CNOT2-221ENST00000549947 POTEB3A0JP26 581 aa15.71■□□□□ 0.11
CNOT2-221ENST00000549947 POTEBQ6S5H4 581 aa15.71■□□□□ 0.11
CNOT2-221ENST00000549947 FAM205CA6NFA0 338 aa15.69■□□□□ 0.1
CNOT2-221ENST00000549947 ZNF316A6NFI3 1004 aaPredicted RBP15.69■□□□□ 0.1
CNOT2-221ENST00000549947 ERBB3P21860 1342 aa15.67■□□□□ 0.1
CNOT2-221ENST00000549947 SPDYE16A6NNV3 312 aaPredicted RBP15.66■□□□□ 0.1
CNOT2-221ENST00000549947 POTEGQ6S5H5 508 aa15.66■□□□□ 0.1
CNOT2-221ENST00000549947 POTEMA6NI47 508 aa15.65■□□□□ 0.1
CNOT2-221ENST00000549947 VARS2Q5ST30 1063 aaKnown RBP15.65■□□□□ 0.1
CNOT2-221ENST00000549947 HS3ST6Q96QI5 342 aa15.64■□□□□ 0.09
CNOT2-221ENST00000549947 SEMA3EO15041 775 aa15.6■□□□□ 0.09
CNOT2-221ENST00000549947 PTGER2P43116 358 aa15.6■□□□□ 0.09
CNOT2-221ENST00000549947 DDX12PQ92771 950 aa15.6■□□□□ 0.09
CNOT2-221ENST00000549947 FOSBP53539 338 aa15.59■□□□□ 0.09
CNOT2-221ENST00000549947 MLLT3P42568 568 aaPredicted RBP15.58■□□□□ 0.08
CNOT2-221ENST00000549947 ZNF454Q8N9F8 522 aa15.57■□□□□ 0.08
CNOT2-221ENST00000549947 PCDHGA10Q9Y5H3 936 aa15.57■□□□□ 0.08
CNOT2-221ENST00000549947 JPH4Q96JJ6 628 aa15.56■□□□□ 0.08
CNOT2-221ENST00000549947 GRXCR2A6NFK2 248 aa15.53■□□□□ 0.08
CNOT2-221ENST00000549947 PHF14O94880 888 aa15.52■□□□□ 0.08
CNOT2-221ENST00000549947 PRIM1P49642 420 aaKnown RBP15.52■□□□□ 0.08
CNOT2-221ENST00000549947 PSDA5PKW4 1024 aaPredicted RBP15.51■□□□□ 0.07
CNOT2-221ENST00000549947 PPP4R3BQ5MIZ7 849 aa15.51■□□□□ 0.07
CNOT2-221ENST00000549947 POTEEQ6S8J3 1075 aa15.51■□□□□ 0.07
CNOT2-221ENST00000549947 TESPA1A2RU30 521 aaPredicted RBP15.5■□□□□ 0.07
CNOT2-221ENST00000549947 NBR1Q14596 966 aa15.49■□□□□ 0.07
CNOT2-221ENST00000549947 ZNF687Q8N1G0 1237 aa15.49■□□□□ 0.07
CNOT2-221ENST00000549947 ZDHHC16Q969W1 377 aa15.48■□□□□ 0.07
CNOT2-221ENST00000549947 ADAM33Q9BZ11 813 aa15.48■□□□□ 0.07
CNOT2-221ENST00000549947 OSBPP22059 807 aa15.47■□□□□ 0.07
CNOT2-221ENST00000549947 TYW1BQ6NUM6 668 aa15.46■□□□□ 0.07
CNOT2-221ENST00000549947 EPAS1Q99814 870 aa15.45■□□□□ 0.06
CNOT2-221ENST00000549947 CDAN1Q8IWY9 1227 aa15.44■□□□□ 0.06
CNOT2-221ENST00000549947 RBM33Q96EV2 1170 aaKnown RBP15.43■□□□□ 0.06
CNOT2-221ENST00000549947 AXIN2Q9Y2T1 843 aa15.43■□□□□ 0.06
CNOT2-221ENST00000549947 FBXW7Q969H0 707 aa15.42■□□□□ 0.06
CNOT2-221ENST00000549947 BCL2L12Q9HB09 334 aa15.42■□□□□ 0.06
CNOT2-221ENST00000549947 EN1Q05925 392 aaPredicted RBP15.41■□□□□ 0.06
CNOT2-221ENST00000549947 KRTAP3-3Q9BYR6 98 aa15.4■□□□□ 0.06
CNOT2-221ENST00000549947 KRTAP3-2Q9BYR7 98 aa15.4■□□□□ 0.06
CNOT2-221ENST00000549947 PSEN2P49810 448 aa15.39■□□□□ 0.05
CNOT2-221ENST00000549947 TSR1Q2NL82 804 aaKnown RBP15.38■□□□□ 0.05
CNOT2-221ENST00000549947 KCNK17Q96T54 332 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms