RNA–Protein interactions for RNA: ENST00000549917.1

PPFIA2-217, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-217ENST00000549917 LHX8Q68G74 356 aa13.26□□□□□ -0.29
PPFIA2-217ENST00000549917 KIF3CO14782 793 aa13.25□□□□□ -0.29
PPFIA2-217ENST00000549917 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
PPFIA2-217ENST00000549917 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
PPFIA2-217ENST00000549917 C2orf72A6NCS6 295 aa13.2□□□□□ -0.3
PPFIA2-217ENST00000549917 VSIG10Q8N0Z9 540 aa13.19□□□□□ -0.3
PPFIA2-217ENST00000549917 GPHNQ9NQX3 736 aaPredicted RBP13.19□□□□□ -0.3
PPFIA2-217ENST00000549917 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
PPFIA2-217ENST00000549917 MFSD10Q14728 455 aa13.18□□□□□ -0.3
PPFIA2-217ENST00000549917 MAMSTRQ6ZN01 415 aa13.16□□□□□ -0.3
PPFIA2-217ENST00000549917 LARP6Q9BRS8 491 aaKnown RBP13.16□□□□□ -0.3
PPFIA2-217ENST00000549917 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
PPFIA2-217ENST00000549917 PDE4AP27815 886 aa13.15□□□□□ -0.3
PPFIA2-217ENST00000549917 DSG2Q14126 1118 aa13.14□□□□□ -0.31
PPFIA2-217ENST00000549917 TMC2Q8TDI7 906 aa13.14□□□□□ -0.31
PPFIA2-217ENST00000549917 FOXK1P85037 733 aa13.12□□□□□ -0.31
PPFIA2-217ENST00000549917 SLAIN1Q8ND83 568 aa13.11□□□□□ -0.31
PPFIA2-217ENST00000549917 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
PPFIA2-217ENST00000549917 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
PPFIA2-217ENST00000549917 PLPP6Q8IY26 295 aa13.06□□□□□ -0.32
PPFIA2-217ENST00000549917 CAMK2BQ13554 666 aa13.02□□□□□ -0.33
PPFIA2-217ENST00000549917 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
PPFIA2-217ENST00000549917 HOXB3P14651 431 aaPredicted RBP13□□□□□ -0.33
PPFIA2-217ENST00000549917 KCNV2Q8TDN2 545 aa12.99□□□□□ -0.33
PPFIA2-217ENST00000549917 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
PPFIA2-217ENST00000549917 E2F4Q16254 413 aa12.98□□□□□ -0.33
PPFIA2-217ENST00000549917 SLC34A2O95436 690 aa12.93□□□□□ -0.34
PPFIA2-217ENST00000549917 OXER1Q8TDS5 423 aa12.92□□□□□ -0.34
PPFIA2-217ENST00000549917 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
PPFIA2-217ENST00000549917 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
PPFIA2-217ENST00000549917 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
PPFIA2-217ENST00000549917 DPYSL4O14531 572 aa12.86□□□□□ -0.35
PPFIA2-217ENST00000549917 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
PPFIA2-217ENST00000549917 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
PPFIA2-217ENST00000549917 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
PPFIA2-217ENST00000549917 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
PPFIA2-217ENST00000549917 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.35
PPFIA2-217ENST00000549917 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
PPFIA2-217ENST00000549917 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
PPFIA2-217ENST00000549917 SNPHO15079 494 aa12.82□□□□□ -0.36
PPFIA2-217ENST00000549917 ARSIQ5FYB1 569 aa12.81□□□□□ -0.36
PPFIA2-217ENST00000549917 LCE2DQ5TA82 110 aaPredicted RBP12.81□□□□□ -0.36
PPFIA2-217ENST00000549917 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
PPFIA2-217ENST00000549917 ST18O60284 1047 aa12.77□□□□□ -0.37
PPFIA2-217ENST00000549917 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
PPFIA2-217ENST00000549917 PDIA6Q15084 440 aa12.77□□□□□ -0.37
PPFIA2-217ENST00000549917 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
PPFIA2-217ENST00000549917 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
PPFIA2-217ENST00000549917 NUDT7P0C024 238 aa12.75□□□□□ -0.37
PPFIA2-217ENST00000549917 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
PPFIA2-217ENST00000549917 EVI5O60447 810 aa12.74□□□□□ -0.37
PPFIA2-217ENST00000549917 TBC1D12O60347 775 aa12.73□□□□□ -0.37
PPFIA2-217ENST00000549917 FAM163AQ96GL9 167 aaPredicted RBP12.72□□□□□ -0.37
PPFIA2-217ENST00000549917 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
PPFIA2-217ENST00000549917 SEMA3EO15041 775 aa12.71□□□□□ -0.37
PPFIA2-217ENST00000549917 SPDYE16A6NNV3 312 aaPredicted RBP12.7□□□□□ -0.38
PPFIA2-217ENST00000549917 MLLT3P42568 568 aaPredicted RBP12.67□□□□□ -0.38
PPFIA2-217ENST00000549917 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
PPFIA2-217ENST00000549917 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
PPFIA2-217ENST00000549917 LHX6Q9UPM6 363 aa12.66□□□□□ -0.38
PPFIA2-217ENST00000549917 PTGER2P43116 358 aa12.65□□□□□ -0.38
PPFIA2-217ENST00000549917 NBR1Q14596 966 aa12.63□□□□□ -0.39
PPFIA2-217ENST00000549917 DDX12PQ92771 950 aa12.62□□□□□ -0.39
PPFIA2-217ENST00000549917 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
PPFIA2-217ENST00000549917 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
PPFIA2-217ENST00000549917 BCANQ96GW7 911 aa12.6□□□□□ -0.39
PPFIA2-217ENST00000549917 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
PPFIA2-217ENST00000549917 FOSBP53539 338 aa12.59□□□□□ -0.39
PPFIA2-217ENST00000549917 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
PPFIA2-217ENST00000549917 PCDHGA10Q9Y5H3 936 aa12.59□□□□□ -0.39
PPFIA2-217ENST00000549917 EMP3P54852 163 aa12.58□□□□□ -0.4
PPFIA2-217ENST00000549917 GRXCR2A6NFK2 248 aa12.57□□□□□ -0.4
PPFIA2-217ENST00000549917 JPH4Q96JJ6 628 aa12.57□□□□□ -0.4
PPFIA2-217ENST00000549917 OSBPP22059 807 aa12.56□□□□□ -0.4
PPFIA2-217ENST00000549917 PHF14O94880 888 aa12.55□□□□□ -0.4
PPFIA2-217ENST00000549917 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
PPFIA2-217ENST00000549917 FAM205CA6NFA0 338 aa12.53□□□□□ -0.4
PPFIA2-217ENST00000549917 VARS2Q5ST30 1063 aaKnown RBP12.53□□□□□ -0.4
PPFIA2-217ENST00000549917 ERBB3P21860 1342 aa12.53□□□□□ -0.4
PPFIA2-217ENST00000549917 HS3ST6Q96QI5 342 aa12.51□□□□□ -0.41
PPFIA2-217ENST00000549917 ADAM33Q9BZ11 813 aa12.5□□□□□ -0.41
PPFIA2-217ENST00000549917 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
PPFIA2-217ENST00000549917 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.49□□□□□ -0.41
PPFIA2-217ENST00000549917 EPAS1Q99814 870 aa12.49□□□□□ -0.41
PPFIA2-217ENST00000549917 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
PPFIA2-217ENST00000549917 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
PPFIA2-217ENST00000549917 RBM26Q5T8P6 1007 aaKnown RBP12.48□□□□□ -0.41
PPFIA2-217ENST00000549917 POTEEQ6S8J3 1075 aa12.48□□□□□ -0.41
PPFIA2-217ENST00000549917 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
PPFIA2-217ENST00000549917 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
PPFIA2-217ENST00000549917 TSR1Q2NL82 804 aaKnown RBP12.45□□□□□ -0.42
PPFIA2-217ENST00000549917 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
PPFIA2-217ENST00000549917 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
PPFIA2-217ENST00000549917 SMYD5Q6GMV2 418 aa12.44□□□□□ -0.42
PPFIA2-217ENST00000549917 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
PPFIA2-217ENST00000549917 POTEMA6NI47 508 aa12.43□□□□□ -0.42
PPFIA2-217ENST00000549917 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
PPFIA2-217ENST00000549917 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
PPFIA2-217ENST00000549917 ZNF687Q8N1G0 1237 aa12.43□□□□□ -0.42
PPFIA2-217ENST00000549917 CDHR5Q9HBB8 845 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms