RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 PLCH2O75038 1416 aa10.9□□□□□ -0.66
CALCOCO1-215ENST00000549688 ARHGAP5Q13017 1502 aa10.89□□□□□ -0.67
CALCOCO1-215ENST00000549688 TRIM26Q12899 539 aaPredicted RBP10.89□□□□□ -0.67
CALCOCO1-215ENST00000549688 CFDP1Q9UEE9 299 aaPredicted RBP10.89□□□□□ -0.67
CALCOCO1-215ENST00000549688 TEX14Q8IWB6 1497 aa10.88□□□□□ -0.67
CALCOCO1-215ENST00000549688 PTPN23Q9H3S7 1636 aa10.88□□□□□ -0.67
CALCOCO1-215ENST00000549688 CD109Q6YHK3 1445 aa10.88□□□□□ -0.67
CALCOCO1-215ENST00000549688 CDC42BPBQ9Y5S2 1711 aa10.88□□□□□ -0.67
CALCOCO1-215ENST00000549688 TCOF1Q13428 1488 aaKnown RBP10.87□□□□□ -0.67
CALCOCO1-215ENST00000549688 KIF13AQ9H1H9 1805 aa10.87□□□□□ -0.67
CALCOCO1-215ENST00000549688 EFCAB2Q5VUJ9 269 aa10.87□□□□□ -0.67
CALCOCO1-215ENST00000549688 FANCAO15360 1455 aa10.86□□□□□ -0.67
CALCOCO1-215ENST00000549688 NEO1Q92859 1461 aa10.86□□□□□ -0.67
CALCOCO1-215ENST00000549688 RSPH4AQ5TD94 716 aa10.85□□□□□ -0.67
CALCOCO1-215ENST00000549688 CAMSAP2Q08AD1 1489 aa10.85□□□□□ -0.67
CALCOCO1-215ENST00000549688 KIAA1107Q9UPP5 1409 aa10.84□□□□□ -0.67
CALCOCO1-215ENST00000549688 FAM69CQ0P6D2 419 aa10.84□□□□□ -0.67
CALCOCO1-215ENST00000549688 ARHGEF5Q12774 1597 aa10.83□□□□□ -0.68
CALCOCO1-215ENST00000549688 SAMD9LQ8IVG5 1584 aa10.82□□□□□ -0.68
CALCOCO1-215ENST00000549688 FAM50AQ14320 339 aaKnown RBP10.82□□□□□ -0.68
CALCOCO1-215ENST00000549688 ABCC1P33527 1531 aa10.82□□□□□ -0.68
CALCOCO1-215ENST00000549688 DNMT1P26358 1616 aaKnown RBP10.81□□□□□ -0.68
CALCOCO1-215ENST00000549688 ADGRL1O94910 1474 aa10.81□□□□□ -0.68
CALCOCO1-215ENST00000549688 SHANK2Q9UPX8 1470 aa10.81□□□□□ -0.68
CALCOCO1-215ENST00000549688 CROCC2H7BZ55 1655 aa10.8□□□□□ -0.68
CALCOCO1-215ENST00000549688 ZNF777Q9ULD5 760 aaPredicted RBP10.8□□□□□ -0.68
CALCOCO1-215ENST00000549688 CCDC141Q6ZP82 1450 aa10.8□□□□□ -0.68
CALCOCO1-215ENST00000549688 TSPOAP1O95153 1857 aa10.79□□□□□ -0.68
CALCOCO1-215ENST00000549688 AKNAQ7Z591 1439 aa10.79□□□□□ -0.68
CALCOCO1-215ENST00000549688 SYCP2Q9BX26 1530 aa10.79□□□□□ -0.68
CALCOCO1-215ENST00000549688 ZNF518AQ6AHZ1 1483 aa10.78□□□□□ -0.68
CALCOCO1-215ENST00000549688 PPRC1Q5VV67 1664 aaKnown RBP10.78□□□□□ -0.68
CALCOCO1-215ENST00000549688 ADGBQ8N7X0 1667 aa10.78□□□□□ -0.68
CALCOCO1-215ENST00000549688 DAPK1P53355 1430 aa10.77□□□□□ -0.68
CALCOCO1-215ENST00000549688 TSPY4P0CV99 314 aa10.77□□□□□ -0.69
CALCOCO1-215ENST00000549688 TSPY10P0CW01 314 aa10.77□□□□□ -0.69
CALCOCO1-215ENST00000549688 TRHP20396 242 aaPredicted RBP10.77□□□□□ -0.69
CALCOCO1-215ENST00000549688 ACIN1Q9UKV3 1341 aaKnown RBP10.77□□□□□ -0.69
CALCOCO1-215ENST00000549688 MAST1Q9Y2H9 1570 aa10.77□□□□□ -0.69
CALCOCO1-215ENST00000549688 MBD5Q9P267 1494 aa10.76□□□□□ -0.69
CALCOCO1-215ENST00000549688 ROCK1Q13464 1354 aa10.76□□□□□ -0.69
CALCOCO1-215ENST00000549688 SCAPERQ9BY12 1400 aa10.75□□□□□ -0.69
CALCOCO1-215ENST00000549688 DENND4BO75064 1496 aaPredicted RBP10.75□□□□□ -0.69
CALCOCO1-215ENST00000549688 POGZQ7Z3K3 1410 aa10.75□□□□□ -0.69
CALCOCO1-215ENST00000549688 ZNF644Q9H582 1327 aaPredicted RBP10.74□□□□□ -0.69
CALCOCO1-215ENST00000549688 ANKRD30AQ9BXX3 1397 aa10.74□□□□□ -0.69
CALCOCO1-215ENST00000549688 RTEL1-TNFRSF6BF6WH68 1400 aa10.74□□□□□ -0.69
CALCOCO1-215ENST00000549688 ABCC5O15440 1437 aa10.74□□□□□ -0.69
CALCOCO1-215ENST00000549688 C9orf84Q5VXU9 1444 aa10.74□□□□□ -0.69
CALCOCO1-215ENST00000549688 ADGRL2O95490 1459 aa10.74□□□□□ -0.69
CALCOCO1-215ENST00000549688 PLXNC1O60486 1568 aa10.73□□□□□ -0.69
CALCOCO1-215ENST00000549688 KDM5CP41229 1560 aa10.73□□□□□ -0.69
CALCOCO1-215ENST00000549688 RICTORQ6R327 1708 aa10.72□□□□□ -0.69
CALCOCO1-215ENST00000549688 HNRNPMP52272 730 aaKnown RBP eCLIP10.72□□□□□ -0.69
CALCOCO1-215ENST00000549688 PCGF6Q9BYE7 350 aa10.72□□□□□ -0.69
CALCOCO1-215ENST00000549688 MAGI2Q86UL8 1455 aa10.72□□□□□ -0.69
CALCOCO1-215ENST00000549688 ZMYM4Q5VZL5 1548 aa10.72□□□□□ -0.69
CALCOCO1-215ENST00000549688 ARHGEF12Q9NZN5 1544 aa10.72□□□□□ -0.69
CALCOCO1-215ENST00000549688 HECW2Q9P2P5 1572 aa10.72□□□□□ -0.69
CALCOCO1-215ENST00000549688 HFM1A2PYH4 1435 aa10.71□□□□□ -0.69
CALCOCO1-215ENST00000549688 SPAG9O60271 1321 aaKnown RBP10.71□□□□□ -0.69
CALCOCO1-215ENST00000549688 ITGAEP38570 1179 aa10.71□□□□□ -0.69
CALCOCO1-215ENST00000549688 GCC2Q8IWJ2 1684 aa10.71□□□□□ -0.69
CALCOCO1-215ENST00000549688 MLH3Q9UHC1 1453 aa10.71□□□□□ -0.69
CALCOCO1-215ENST00000549688 INO80Q9ULG1 1556 aaPredicted RBP10.71□□□□□ -0.69
CALCOCO1-215ENST00000549688 ATP7AQ04656 1500 aa10.7□□□□□ -0.7
CALCOCO1-215ENST00000549688 ZFYVE16Q7Z3T8 1539 aa10.7□□□□□ -0.7
CALCOCO1-215ENST00000549688 NCOA1Q15788 1441 aa10.69□□□□□ -0.7
CALCOCO1-215ENST00000549688 TRAPPC8Q9Y2L5 1435 aa10.69□□□□□ -0.7
CALCOCO1-215ENST00000549688 KDM6BO15054 1643 aa10.68□□□□□ -0.7
CALCOCO1-215ENST00000549688 DUOX2Q9NRD8 1548 aa10.67□□□□□ -0.7
CALCOCO1-215ENST00000549688 PTPRKQ15262 1439 aa10.67□□□□□ -0.7
CALCOCO1-215ENST00000549688 ERBINQ96RT1 1412 aa10.67□□□□□ -0.7
CALCOCO1-215ENST00000549688 SETD5Q9C0A6 1442 aa10.67□□□□□ -0.7
CALCOCO1-215ENST00000549688 KIF15Q9NS87 1388 aa10.66□□□□□ -0.7
CALCOCO1-215ENST00000549688 FRMPD1Q5SYB0 1578 aa10.66□□□□□ -0.7
CALCOCO1-215ENST00000549688 HRCP23327 699 aa10.66□□□□□ -0.7
CALCOCO1-215ENST00000549688 AFAP1Q8N556 730 aa10.66□□□□□ -0.7
CALCOCO1-215ENST00000549688 MYT1LQ9UL68 1186 aa10.66□□□□□ -0.7
CALCOCO1-215ENST00000549688 KIDINS220Q9ULH0 1771 aa10.66□□□□□ -0.7
CALCOCO1-215ENST00000549688 NAIPQ13075 1403 aa10.66□□□□□ -0.7
CALCOCO1-215ENST00000549688 EIF2AK4Q9P2K8 1649 aaKnown RBP10.66□□□□□ -0.7
CALCOCO1-215ENST00000549688 CHIC2Q9UKJ5 165 aa10.65□□□□□ -0.7
CALCOCO1-215ENST00000549688 ANKRD50Q9ULJ7 1429 aa10.64□□□□□ -0.71
CALCOCO1-215ENST00000549688 REREQ9P2R6 1566 aa10.64□□□□□ -0.71
CALCOCO1-215ENST00000549688 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
CALCOCO1-215ENST00000549688 RAPGEF3O95398 923 aa10.63□□□□□ -0.71
CALCOCO1-215ENST00000549688 ABCA6Q8N139 1617 aa10.62□□□□□ -0.71
CALCOCO1-215ENST00000549688 BCORL1Q5H9F3 1711 aa10.62□□□□□ -0.71
CALCOCO1-215ENST00000549688 A2MP01023 1474 aa10.61□□□□□ -0.71
CALCOCO1-215ENST00000549688 DIP2CQ9Y2E4 1556 aa10.61□□□□□ -0.71
CALCOCO1-215ENST00000549688 RRP7BPQ9NSQ0 103 aa10.61□□□□□ -0.71
CALCOCO1-215ENST00000549688 DHX29Q7Z478 1369 aaKnown RBP10.61□□□□□ -0.71
CALCOCO1-215ENST00000549688 RAB3GAP2Q9H2M9 1393 aa10.61□□□□□ -0.71
CALCOCO1-215ENST00000549688 ATP10AO60312 1499 aa10.6□□□□□ -0.71
CALCOCO1-215ENST00000549688 COL17A1Q9UMD9 1497 aaPredicted RBP10.59□□□□□ -0.71
CALCOCO1-215ENST00000549688 UNC13BO14795 1591 aa10.59□□□□□ -0.71
CALCOCO1-215ENST00000549688 FAM135AQ9P2D6 1515 aa10.58□□□□□ -0.72
CALCOCO1-215ENST00000549688 DEPDC5O75140 1603 aa10.58□□□□□ -0.72
CALCOCO1-215ENST00000549688 AGLP35573 1532 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms