RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 POGZQ7Z3K3 1410 aa38.9■■■■□ 3.82
USP44-205ENST00000549639 ARHGAP5Q13017 1502 aa38.89■■■■□ 3.82
USP44-205ENST00000549639 ARID4BQ4LE39 1312 aaPredicted RBP38.85■■■■□ 3.81
USP44-205ENST00000549639 ZFYVE16Q7Z3T8 1539 aa38.84■■■■□ 3.81
USP44-205ENST00000549639 ADAMTSL3P82987 1691 aa38.82■■■■□ 3.81
USP44-205ENST00000549639 CEP162Q5TB80 1403 aa38.8■■■■□ 3.8
USP44-205ENST00000549639 BCORL1Q5H9F3 1711 aa38.79■■■■□ 3.8
USP44-205ENST00000549639 ZNF518AQ6AHZ1 1483 aa38.78■■■■□ 3.8
USP44-205ENST00000549639 PREX2Q70Z35 1606 aa38.78■■■■□ 3.8
USP44-205ENST00000549639 YEATS2Q9ULM3 1422 aa38.77■■■■□ 3.8
USP44-205ENST00000549639 CDC42BPBQ9Y5S2 1711 aa38.77■■■■□ 3.8
USP44-205ENST00000549639 PTPRMP28827 1452 aa38.69■■■■□ 3.78
USP44-205ENST00000549639 KDM5CP41229 1560 aa38.68■■■■□ 3.78
USP44-205ENST00000549639 ATP10AO60312 1499 aa38.66■■■■□ 3.78
USP44-205ENST00000549639 CDC42BPAQ5VT25 1732 aa38.66■■■■□ 3.78
USP44-205ENST00000549639 AFAP1Q8N556 730 aa38.64■■■■□ 3.78
USP44-205ENST00000549639 MTUS2Q5JR59 1369 aa38.64■■■■□ 3.78
USP44-205ENST00000549639 ABCC1P33527 1531 aa38.63■■■■□ 3.78
USP44-205ENST00000549639 MADDQ8WXG6 1647 aa38.63■■■■□ 3.78
USP44-205ENST00000549639 HECW2Q9P2P5 1572 aa38.62■■■■□ 3.77
USP44-205ENST00000549639 C9orf84Q5VXU9 1444 aa38.62■■■■□ 3.77
USP44-205ENST00000549639 GPATCH8Q9UKJ3 1502 aaKnown RBP38.59■■■■□ 3.77
USP44-205ENST00000549639 MLH3Q9UHC1 1453 aa38.58■■■■□ 3.77
USP44-205ENST00000549639 ITSN2Q9NZM3 1697 aa38.55■■■■□ 3.76
USP44-205ENST00000549639 SIGLEC1Q9BZZ2 1709 aa38.55■■■■□ 3.76
USP44-205ENST00000549639 ARHGEF12Q9NZN5 1544 aa38.55■■■■□ 3.76
USP44-205ENST00000549639 LOC105371045A0A1W2PR82 267 aa38.54■■■■□ 3.76
USP44-205ENST00000549639 MYT1LQ9UL68 1186 aa38.54■■■■□ 3.76
USP44-205ENST00000549639 CCNB3Q8WWL7 1395 aa38.54■■■■□ 3.76
USP44-205ENST00000549639 TRAPPC8Q9Y2L5 1435 aa38.54■■■■□ 3.76
USP44-205ENST00000549639 EHBP1L1Q8N3D4 1523 aa38.53■■■■□ 3.76
USP44-205ENST00000549639 ZNF777Q9ULD5 760 aaPredicted RBP38.5■■■■□ 3.75
USP44-205ENST00000549639 RIMS1Q86UR5 1692 aaKnown RBP38.49■■■■□ 3.75
USP44-205ENST00000549639 CFDP1Q9UEE9 299 aaPredicted RBP38.49■■■■□ 3.75
USP44-205ENST00000549639 REREQ9P2R6 1566 aa38.48■■■■□ 3.75
USP44-205ENST00000549639 PLEKHH2Q8IVE3 1493 aa38.47■■■■□ 3.75
USP44-205ENST00000549639 SAMD9LQ8IVG5 1584 aa38.47■■■■□ 3.75
USP44-205ENST00000549639 DIP2CQ9Y2E4 1556 aa38.46■■■■□ 3.75
USP44-205ENST00000549639 KIAA1107Q9UPP5 1409 aa38.46■■■■□ 3.75
USP44-205ENST00000549639 MLECQ14165 292 aa38.45■■■■□ 3.75
USP44-205ENST00000549639 VPS8Q8N3P4 1428 aa38.42■■■■□ 3.74
USP44-205ENST00000549639 SYCP2Q9BX26 1530 aa38.4■■■■□ 3.74
USP44-205ENST00000549639 ABCA6Q8N139 1617 aa38.4■■■■□ 3.74
USP44-205ENST00000549639 FER1L4A9Z1Z3 1794 aa38.39■■■■□ 3.74
USP44-205ENST00000549639 TIAM1Q13009 1591 aa38.36■■■■□ 3.73
USP44-205ENST00000549639 KIDINS220Q9ULH0 1771 aa38.36■■■■□ 3.73
USP44-205ENST00000549639 AGLP35573 1532 aa38.35■■■■□ 3.73
USP44-205ENST00000549639 HNRNPMP52272 730 aaKnown RBP eCLIP38.35■■■■□ 3.73
USP44-205ENST00000549639 SPAG9O60271 1321 aaKnown RBP38.33■■■■□ 3.73
USP44-205ENST00000549639 SUPT6HQ7KZ85 1726 aaKnown RBP38.3■■■■□ 3.72
USP44-205ENST00000549639 NCOA2Q15596 1464 aa38.27■■■■□ 3.72
USP44-205ENST00000549639 LMTK3Q96Q04 1460 aa38.25■■■■□ 3.71
USP44-205ENST00000549639 ATP7AQ04656 1500 aa38.22■■■■□ 3.71
USP44-205ENST00000549639 MAP3K1Q13233 1512 aa38.22■■■■□ 3.71
USP44-205ENST00000549639 PLPPR3Q6T4P5 718 aa38.21■■■■□ 3.71
USP44-205ENST00000549639 INO80Q9ULG1 1556 aaPredicted RBP38.2■■■■□ 3.71
USP44-205ENST00000549639 LRRC9Q6ZRR7 1453 aa38.2■■■■□ 3.71
USP44-205ENST00000549639 ZNF644Q9H582 1327 aaPredicted RBP38.19■■■■□ 3.7
USP44-205ENST00000549639 MBD5Q9P267 1494 aa38.18■■■■□ 3.7
USP44-205ENST00000549639 ESF1Q9H501 851 aaKnown RBP38.17■■■■□ 3.7
USP44-205ENST00000549639 RSPH4AQ5TD94 716 aa38.14■■■■□ 3.7
USP44-205ENST00000549639 RTEL1-TNFRSF6BF6WH68 1400 aa38.12■■■■□ 3.69
USP44-205ENST00000549639 CNTLNQ9NXG0 1405 aa38.11■■■■□ 3.69
USP44-205ENST00000549639 A2MP01023 1474 aa38.1■■■■□ 3.69
USP44-205ENST00000549639 CEBPAP49715 358 aaPredicted RBP38.08■■■■□ 3.69
USP44-205ENST00000549639 CAMSAP2Q08AD1 1489 aa38.08■■■■□ 3.69
USP44-205ENST00000549639 PLXNC1O60486 1568 aa38.07■■■■□ 3.69
USP44-205ENST00000549639 CCDC141Q6ZP82 1450 aa38.05■■■■□ 3.68
USP44-205ENST00000549639 ADGBQ8N7X0 1667 aa38.04■■■■□ 3.68
USP44-205ENST00000549639 PREX1Q8TCU6 1659 aa38.04■■■■□ 3.68
USP44-205ENST00000549639 SETD1BQ9UPS6 1966 aaKnown RBP38.02■■■■□ 3.68
USP44-205ENST00000549639 KANK4Q5T7N3 995 aaPredicted RBP38.02■■■■□ 3.68
USP44-205ENST00000549639 APLP2Q06481 763 aa38.01■■■■□ 3.68
USP44-205ENST00000549639 HSPA2P54652 639 aa37.99■■■■□ 3.67
USP44-205ENST00000549639 C3P01024 1663 aa37.98■■■■□ 3.67
USP44-205ENST00000549639 ARHGEF5Q12774 1597 aa37.97■■■■□ 3.67
USP44-205ENST00000549639 PPP6R1Q9UPN7 881 aa37.96■■■■□ 3.67
USP44-205ENST00000549639 UHRF1BP1Q6BDS2 1440 aa37.95■■■■□ 3.67
USP44-205ENST00000549639 MROH2AA6NES4 1674 aa37.95■■■■□ 3.66
USP44-205ENST00000549639 MIA2Q96PC5 1412 aa37.94■■■■□ 3.66
USP44-205ENST00000549639 DHX29Q7Z478 1369 aaKnown RBP37.93■■■■□ 3.66
USP44-205ENST00000549639 TSPY4P0CV99 314 aa37.92■■■■□ 3.66
USP44-205ENST00000549639 TSPY10P0CW01 314 aa37.92■■■■□ 3.66
USP44-205ENST00000549639 MYOM3Q5VTT5 1437 aa37.92■■■■□ 3.66
USP44-205ENST00000549639 GGT6Q6P531 493 aa37.88■■■■□ 3.65
USP44-205ENST00000549639 ZMYM3Q14202 1370 aa37.88■■■■□ 3.65
USP44-205ENST00000549639 NPATQ14207 1427 aa37.86■■■■□ 3.65
USP44-205ENST00000549639 ILDR1Q86SU0 546 aaPredicted RBP37.82■■■■□ 3.64
USP44-205ENST00000549639 CLTCQ00610 1675 aaKnown RBP37.8■■■■□ 3.64
USP44-205ENST00000549639 MAST1Q9Y2H9 1570 aa37.78■■■■□ 3.64
USP44-205ENST00000549639 KIF3BO15066 747 aa37.75■■■■□ 3.63
USP44-205ENST00000549639 FAM135AQ9P2D6 1515 aa37.74■■■■□ 3.63
USP44-205ENST00000549639 DMRT2Q9Y5R5 561 aa37.74■■■■□ 3.63
USP44-205ENST00000549639 PTPRKQ15262 1439 aa37.68■■■■□ 3.62
USP44-205ENST00000549639 KDM5DQ9BY66 1539 aa37.64■■■■□ 3.62
USP44-205ENST00000549639 PTPN23Q9H3S7 1636 aa37.64■■■■□ 3.62
USP44-205ENST00000549639 STRCQ7RTU9 1775 aa37.63■■■■□ 3.61
USP44-205ENST00000549639 FGD6Q6ZV73 1430 aa37.61■■■■□ 3.61
USP44-205ENST00000549639 WASHC2CQ9Y4E1 1318 aa37.61■■■■□ 3.61
USP44-205ENST00000549639 SHANK2Q9UPX8 1470 aa37.6■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms