RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 PPP1R15BQ5SWA1 713 aa17.45■□□□□ 0.38
PRIM1-204ENST00000549549 TRPC6Q9Y210 931 aa17.42■□□□□ 0.38
PRIM1-204ENST00000549549 KRI1Q8N9T8 703 aaKnown RBP17.39■□□□□ 0.37
PRIM1-204ENST00000549549 SPDYE16A6NNV3 312 aaPredicted RBP17.38■□□□□ 0.37
PRIM1-204ENST00000549549 GPBP1L1Q9HC44 474 aaPredicted RBP17.38■□□□□ 0.37
PRIM1-204ENST00000549549 MS4A3Q96HJ5 214 aa17.37■□□□□ 0.37
PRIM1-204ENST00000549549 PDIA6Q15084 440 aa17.35■□□□□ 0.37
PRIM1-204ENST00000549549 EMILIN3Q9NT22 766 aa17.35■□□□□ 0.37
PRIM1-204ENST00000549549 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
PRIM1-204ENST00000549549 TRIM66O15016 1216 aa17.34■□□□□ 0.37
PRIM1-204ENST00000549549 DPYSL4O14531 572 aa17.33■□□□□ 0.36
PRIM1-204ENST00000549549 TIE1P35590 1138 aa17.33■□□□□ 0.36
PRIM1-204ENST00000549549 KDM4CQ9H3R0 1056 aa17.32■□□□□ 0.36
PRIM1-204ENST00000549549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.368e-7■□□□□ 8.8
PRIM1-204ENST00000549549 PDE4DQ08499 809 aa17.29■□□□□ 0.36
PRIM1-204ENST00000549549 IL27Q8NEV9 243 aa17.29■□□□□ 0.36
PRIM1-204ENST00000549549 TTLL13PA6NNM8 815 aa17.28■□□□□ 0.36
PRIM1-204ENST00000549549 DSG2Q14126 1118 aa17.28■□□□□ 0.36
PRIM1-204ENST00000549549 GPR37O15354 613 aa17.25■□□□□ 0.35
PRIM1-204ENST00000549549 FOXK1P85037 733 aa17.24■□□□□ 0.35
PRIM1-204ENST00000549549 C19orf67A6NJJ6 358 aa17.2■□□□□ 0.34
PRIM1-204ENST00000549549 MICALL2Q8IY33 904 aa17.19■□□□□ 0.34
PRIM1-204ENST00000549549 BMP2KQ9NSY1 1161 aaPredicted RBP17.19■□□□□ 0.34
PRIM1-204ENST00000549549 DPY19L2Q6NUT2 758 aa17.18■□□□□ 0.34
PRIM1-204ENST00000549549 TMC2Q8TDI7 906 aa17.17■□□□□ 0.34
PRIM1-204ENST00000549549 ZMYND15Q9H091 742 aa17.16■□□□□ 0.34
PRIM1-204ENST00000549549 MINK1Q8N4C8 1332 aaPredicted RBP17.16■□□□□ 0.34
PRIM1-204ENST00000549549 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
PRIM1-204ENST00000549549 PLPP6Q8IY26 295 aa17.11■□□□□ 0.33
PRIM1-204ENST00000549549 TMEM121BQ9BXQ6 578 aaPredicted RBP17.11■□□□□ 0.33
PRIM1-204ENST00000549549 PDCD7Q8N8D1 485 aaKnown RBP17.1■□□□□ 0.33
PRIM1-204ENST00000549549 KIF3CO14782 793 aa17.09■□□□□ 0.33
PRIM1-204ENST00000549549 FAM117AQ9C073 453 aa17.09■□□□□ 0.33
PRIM1-204ENST00000549549 MAP2K5Q13163 448 aa17.08■□□□□ 0.32
PRIM1-204ENST00000549549 IRF6O14896 467 aa17.06■□□□□ 0.32
PRIM1-204ENST00000549549 AMHR2Q16671 573 aa17.05■□□□□ 0.32
PRIM1-204ENST00000549549 RSPH6AQ9H0K4 717 aa17.05■□□□□ 0.32
PRIM1-204ENST00000549549 C2orf72A6NCS6 295 aa17.03■□□□□ 0.32
PRIM1-204ENST00000549549 GRXCR2A6NFK2 248 aa17.03■□□□□ 0.32
PRIM1-204ENST00000549549 MAP3K9P80192 1104 aa17.03■□□□□ 0.32
PRIM1-204ENST00000549549 CCDC102AQ96A19 550 aa17.03■□□□□ 0.32
PRIM1-204ENST00000549549 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
PRIM1-204ENST00000549549 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
PRIM1-204ENST00000549549 OSBPP22059 807 aa17.02■□□□□ 0.32
PRIM1-204ENST00000549549 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.32
PRIM1-204ENST00000549549 PTGER2P43116 358 aa17.01■□□□□ 0.31
PRIM1-204ENST00000549549 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
PRIM1-204ENST00000549549 GNPATO15228 680 aa16.99■□□□□ 0.31
PRIM1-204ENST00000549549 IRX5P78411 483 aaPredicted RBP16.99■□□□□ 0.31
PRIM1-204ENST00000549549 BOLA1Q9Y3E2 137 aa16.99■□□□□ 0.31
PRIM1-204ENST00000549549 GALR2O43603 387 aaPredicted RBP16.97■□□□□ 0.31
PRIM1-204ENST00000549549 HIC1Q14526 733 aa16.96■□□□□ 0.31
PRIM1-204ENST00000549549 PARP9Q8IXQ6 854 aa16.96■□□□□ 0.31
PRIM1-204ENST00000549549 OCEL1Q9H607 264 aa16.95■□□□□ 0.3
PRIM1-204ENST00000549549 FCHSD2O94868 740 aa16.94■□□□□ 0.3
PRIM1-204ENST00000549549 OXER1Q8TDS5 423 aa16.93■□□□□ 0.3
PRIM1-204ENST00000549549 CLCN6P51797 869 aa16.92■□□□□ 0.3
PRIM1-204ENST00000549549 IER5LQ5T953 404 aa16.92■□□□□ 0.3
PRIM1-204ENST00000549549 GOPCQ9HD26 462 aa16.91■□□□□ 0.3
PRIM1-204ENST00000549549 ATN1P54259 1190 aaPredicted RBP16.9■□□□□ 0.3
PRIM1-204ENST00000549549 FECHP22830 423 aa16.89■□□□□ 0.29
PRIM1-204ENST00000549549 UBTFP17480 764 aaKnown RBP16.87■□□□□ 0.29
PRIM1-204ENST00000549549 G3V3G9 751 aa16.85■□□□□ 0.29
PRIM1-204ENST00000549549 FLIIQ13045 1269 aa16.85■□□□□ 0.29
PRIM1-204ENST00000549549 UPF1Q92900 1129 aaKnown RBP eCLIP16.85■□□□□ 0.29
PRIM1-204ENST00000549549 ATMINO43313 823 aaPredicted RBP16.84■□□□□ 0.29
PRIM1-204ENST00000549549 DDX12PQ92771 950 aa16.84■□□□□ 0.29
PRIM1-204ENST00000549549 PTGDRQ13258 359 aa16.83■□□□□ 0.28
PRIM1-204ENST00000549549 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
PRIM1-204ENST00000549549 ASTLQ6HA08 431 aaPredicted RBP16.82■□□□□ 0.28
PRIM1-204ENST00000549549 TBC1D12O60347 775 aa16.81■□□□□ 0.28
PRIM1-204ENST00000549549 TMEM92Q6UXU6 159 aa16.81■□□□□ 0.28
PRIM1-204ENST00000549549 L3MBTL3Q96JM7 780 aaPredicted RBP16.8■□□□□ 0.28
PRIM1-204ENST00000549549 ONECUT3O60422 494 aaPredicted RBP16.78■□□□□ 0.28
PRIM1-204ENST00000549549 EVI5O60447 810 aa16.77■□□□□ 0.28
PRIM1-204ENST00000549549 C1orf115Q9H7X2 142 aa16.77■□□□□ 0.28
PRIM1-204ENST00000549549 TTLL12Q14166 644 aaPredicted RBP16.76■□□□□ 0.27
PRIM1-204ENST00000549549 PLCG2P16885 1265 aa16.74■□□□□ 0.27
PRIM1-204ENST00000549549 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
PRIM1-204ENST00000549549 MS4A1P11836 297 aa16.72■□□□□ 0.27
PRIM1-204ENST00000549549 ANO8Q9HCE9 1232 aaPredicted RBP16.72■□□□□ 0.27
PRIM1-204ENST00000549549 PTCD2Q8WV60 388 aaKnown RBP16.7■□□□□ 0.26
PRIM1-204ENST00000549549 TMUB1Q9BVT8 246 aa16.7■□□□□ 0.26
PRIM1-204ENST00000549549 REPIN1Q9BWE0 567 aaKnown RBP16.69■□□□□ 0.26
PRIM1-204ENST00000549549 PCMTD1Q96MG8 357 aaPredicted RBP16.67■□□□□ 0.26
PRIM1-204ENST00000549549 NPDC1Q9NQX5 325 aaPredicted RBP16.67■□□□□ 0.26
PRIM1-204ENST00000549549 A6NJR5 290 aa16.66■□□□□ 0.26
PRIM1-204ENST00000549549 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
PRIM1-204ENST00000549549 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
PRIM1-204ENST00000549549 EVX2Q03828 476 aa16.63■□□□□ 0.25
PRIM1-204ENST00000549549 APBB1O00213 710 aa16.62■□□□□ 0.25
PRIM1-204ENST00000549549 SLC34A2O95436 690 aa16.62■□□□□ 0.25
PRIM1-204ENST00000549549 CLCN1P35523 988 aa16.61■□□□□ 0.25
PRIM1-204ENST00000549549 EN1Q05925 392 aaPredicted RBP16.61■□□□□ 0.25
PRIM1-204ENST00000549549 EPAS1Q99814 870 aa16.61■□□□□ 0.25
PRIM1-204ENST00000549549 ARID3CA6NKF2 412 aa16.6■□□□□ 0.25
PRIM1-204ENST00000549549 ARID3AQ99856 593 aa16.6■□□□□ 0.25
PRIM1-204ENST00000549549 PHF14O94880 888 aa16.59■□□□□ 0.25
PRIM1-204ENST00000549549 HAX1O00165 279 aa16.58■□□□□ 0.24
PRIM1-204ENST00000549549 CDHR5Q9HBB8 845 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms