RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 PDE4AP27815 886 aa11.35□□□□□ -0.59
PRDM4-204ENST00000549416 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
PRDM4-204ENST00000549416 LARP6Q9BRS8 491 aaKnown RBP11.34□□□□□ -0.59
PRDM4-204ENST00000549416 MFSD10Q14728 455 aa11.33□□□□□ -0.6
PRDM4-204ENST00000549416 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
PRDM4-204ENST00000549416 KIF3CO14782 793 aa11.31□□□□□ -0.6
PRDM4-204ENST00000549416 WDR70Q9NW82 654 aa11.3□□□□□ -0.6
PRDM4-204ENST00000549416 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
PRDM4-204ENST00000549416 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
PRDM4-204ENST00000549416 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
PRDM4-204ENST00000549416 TMC2Q8TDI7 906 aa11.27□□□□□ -0.61
PRDM4-204ENST00000549416 DSG2Q14126 1118 aa11.26□□□□□ -0.61
PRDM4-204ENST00000549416 FOXK1P85037 733 aa11.25□□□□□ -0.61
PRDM4-204ENST00000549416 PPP1R15BQ5SWA1 713 aa11.25□□□□□ -0.61
PRDM4-204ENST00000549416 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.24□□□□□ -0.61
PRDM4-204ENST00000549416 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
PRDM4-204ENST00000549416 E2F4Q16254 413 aa11.22□□□□□ -0.61
PRDM4-204ENST00000549416 CAMK2BQ13554 666 aa11.21□□□□□ -0.61
PRDM4-204ENST00000549416 PLPP6Q8IY26 295 aa11.2□□□□□ -0.62
PRDM4-204ENST00000549416 P3H3Q8IVL6 736 aa11.18□□□□□ -0.62
PRDM4-204ENST00000549416 SCUBE2Q9NQ36 999 aa11.16□□□□□ -0.62
PRDM4-204ENST00000549416 MAMSTRQ6ZN01 415 aa11.15□□□□□ -0.62
PRDM4-204ENST00000549416 EMILIN3Q9NT22 766 aa11.15□□□□□ -0.62
PRDM4-204ENST00000549416 LHX8Q68G74 356 aa11.14□□□□□ -0.63
PRDM4-204ENST00000549416 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
PRDM4-204ENST00000549416 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
PRDM4-204ENST00000549416 ARHGEF1Q92888 912 aaKnown RBP11.12□□□□□ -0.63
PRDM4-204ENST00000549416 BCANQ96GW7 911 aa11.12□□□□□ -0.63
PRDM4-204ENST00000549416 ARIH1Q9Y4X5 557 aaPredicted RBP11.12□□□□□ -0.63
PRDM4-204ENST00000549416 DPYSL4O14531 572 aa11.06□□□□□ -0.64
PRDM4-204ENST00000549416 NBR1Q14596 966 aa11.06□□□□□ -0.64
PRDM4-204ENST00000549416 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
PRDM4-204ENST00000549416 SLC34A2O95436 690 aa11.05□□□□□ -0.64
PRDM4-204ENST00000549416 UPF1Q92900 1129 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRDM4-204ENST00000549416 HOXB3P14651 431 aaPredicted RBP11.03□□□□□ -0.64
PRDM4-204ENST00000549416 PTCD2Q8WV60 388 aaKnown RBP11.03□□□□□ -0.64
PRDM4-204ENST00000549416 SEMA3EO15041 775 aa11□□□□□ -0.65
PRDM4-204ENST00000549416 MAP3K9P80192 1104 aa11□□□□□ -0.65
PRDM4-204ENST00000549416 PDIA6Q15084 440 aa10.99□□□□□ -0.65
PRDM4-204ENST00000549416 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
PRDM4-204ENST00000549416 PCDHGA4Q9Y5G9 962 aa10.97□□□□□ -0.65
PRDM4-204ENST00000549416 SPDYE16A6NNV3 312 aaPredicted RBP10.96□□□□□ -0.65
PRDM4-204ENST00000549416 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
PRDM4-204ENST00000549416 TBC1D12O60347 775 aa10.94□□□□□ -0.66
PRDM4-204ENST00000549416 EVI5O60447 810 aa10.93□□□□□ -0.66
PRDM4-204ENST00000549416 GPR153Q6NV75 609 aa10.93□□□□□ -0.66
PRDM4-204ENST00000549416 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.66
PRDM4-204ENST00000549416 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
PRDM4-204ENST00000549416 SNPHO15079 494 aa10.92□□□□□ -0.66
PRDM4-204ENST00000549416 MLLT3P42568 568 aaPredicted RBP10.92□□□□□ -0.66
PRDM4-204ENST00000549416 ARSIQ5FYB1 569 aa10.91□□□□□ -0.66
PRDM4-204ENST00000549416 ANO8Q9HCE9 1232 aaPredicted RBP10.91□□□□□ -0.66
PRDM4-204ENST00000549416 ZSWIM6Q9HCJ5 1215 aa10.91□□□□□ -0.66
PRDM4-204ENST00000549416 RIMBP2O15034 1052 aa10.89□□□□□ -0.67
PRDM4-204ENST00000549416 ZNF710Q8N1W2 664 aa10.89□□□□□ -0.67
PRDM4-204ENST00000549416 NUDT7P0C024 238 aa10.88□□□□□ -0.67
PRDM4-204ENST00000549416 PTGER2P43116 358 aa10.87□□□□□ -0.67
PRDM4-204ENST00000549416 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
PRDM4-204ENST00000549416 GRXCR2A6NFK2 248 aa10.84□□□□□ -0.67
PRDM4-204ENST00000549416 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
PRDM4-204ENST00000549416 DDX12PQ92771 950 aa10.84□□□□□ -0.67
PRDM4-204ENST00000549416 ZNF316A6NFI3 1004 aaPredicted RBP10.83□□□□□ -0.68
PRDM4-204ENST00000549416 SMYD5Q6GMV2 418 aa10.82□□□□□ -0.68
PRDM4-204ENST00000549416 LMOD2Q6P5Q4 547 aa10.82□□□□□ -0.68
PRDM4-204ENST00000549416 OSBPP22059 807 aa10.81□□□□□ -0.68
PRDM4-204ENST00000549416 ST18O60284 1047 aa10.8□□□□□ -0.68
PRDM4-204ENST00000549416 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
PRDM4-204ENST00000549416 TULP1O00294 542 aaPredicted RBP10.79□□□□□ -0.68
PRDM4-204ENST00000549416 RBM26Q5T8P6 1007 aaKnown RBP10.79□□□□□ -0.68
PRDM4-204ENST00000549416 LHX6Q9UPM6 363 aa10.79□□□□□ -0.68
PRDM4-204ENST00000549416 PHF14O94880 888 aa10.78□□□□□ -0.68
PRDM4-204ENST00000549416 PCDHGA10Q9Y5H3 936 aa10.78□□□□□ -0.68
PRDM4-204ENST00000549416 FOSBP53539 338 aa10.77□□□□□ -0.69
PRDM4-204ENST00000549416 LCE2DQ5TA82 110 aaPredicted RBP10.76□□□□□ -0.69
PRDM4-204ENST00000549416 FAM163AQ96GL9 167 aaPredicted RBP10.76□□□□□ -0.69
PRDM4-204ENST00000549416 JPH4Q96JJ6 628 aa10.76□□□□□ -0.69
PRDM4-204ENST00000549416 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
PRDM4-204ENST00000549416 PRKCSHP14314 528 aaPredicted RBP10.74□□□□□ -0.69
PRDM4-204ENST00000549416 EPAS1Q99814 870 aa10.74□□□□□ -0.69
PRDM4-204ENST00000549416 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
PRDM4-204ENST00000549416 EN1Q05925 392 aaPredicted RBP10.72□□□□□ -0.69
PRDM4-204ENST00000549416 TYW1BQ6NUM6 668 aa10.72□□□□□ -0.69
PRDM4-204ENST00000549416 MARVELD3Q96A59 401 aa10.71□□□□□ -0.69
PRDM4-204ENST00000549416 ZDHHC16Q969W1 377 aa10.7□□□□□ -0.7
PRDM4-204ENST00000549416 ZC3H15Q8WU90 426 aaKnown RBP10.69□□□□□ -0.7
PRDM4-204ENST00000549416 FBXW7Q969H0 707 aa10.69□□□□□ -0.7
PRDM4-204ENST00000549416 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
PRDM4-204ENST00000549416 ADAM33Q9BZ11 813 aa10.69□□□□□ -0.7
PRDM4-204ENST00000549416 PSDA5PKW4 1024 aaPredicted RBP10.68□□□□□ -0.7
PRDM4-204ENST00000549416 GPR37O15354 613 aa10.68□□□□□ -0.7
PRDM4-204ENST00000549416 TSR1Q2NL82 804 aaKnown RBP10.68□□□□□ -0.7
PRDM4-204ENST00000549416 GPIHBP1Q8IV16 184 aa10.68□□□□□ -0.7
PRDM4-204ENST00000549416 EMP3P54852 163 aa10.67□□□□□ -0.7
PRDM4-204ENST00000549416 PPP4R3BQ5MIZ7 849 aa10.67□□□□□ -0.7
PRDM4-204ENST00000549416 CDHR5Q9HBB8 845 aa10.67□□□□□ -0.7
PRDM4-204ENST00000549416 ERBB3P21860 1342 aa10.66□□□□□ -0.7
PRDM4-204ENST00000549416 NUTM2FA1L443 756 aa10.66□□□□□ -0.7
PRDM4-204ENST00000549416 MAP3K7O43318 606 aa10.66□□□□□ -0.7
PRDM4-204ENST00000549416 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
PRDM4-204ENST00000549416 VARS2Q5ST30 1063 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms