RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 ZNF710Q8N1W2 664 aa12.79□□□□□ -0.36
UBE2N-202ENST00000548946 RIMBP2O15034 1052 aa12.78□□□□□ -0.36
UBE2N-202ENST00000548946 HOXB3P14651 431 aaPredicted RBP12.78□□□□□ -0.36
UBE2N-202ENST00000548946 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
UBE2N-202ENST00000548946 PCDH10Q9P2E7 1040 aa12.75□□□□□ -0.37
UBE2N-202ENST00000548946 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
UBE2N-202ENST00000548946 KIF3CO14782 793 aa12.73□□□□□ -0.37
UBE2N-202ENST00000548946 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
UBE2N-202ENST00000548946 MARVELD3Q96A59 401 aa12.72□□□□□ -0.37
UBE2N-202ENST00000548946 EMP3P54852 163 aa12.7□□□□□ -0.38
UBE2N-202ENST00000548946 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
UBE2N-202ENST00000548946 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
UBE2N-202ENST00000548946 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
UBE2N-202ENST00000548946 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
UBE2N-202ENST00000548946 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
UBE2N-202ENST00000548946 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
UBE2N-202ENST00000548946 FAM205CA6NFA0 338 aa12.61□□□□□ -0.39
UBE2N-202ENST00000548946 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
UBE2N-202ENST00000548946 FOXK1P85037 733 aa12.6□□□□□ -0.39
UBE2N-202ENST00000548946 GPR153Q6NV75 609 aa12.6□□□□□ -0.39
UBE2N-202ENST00000548946 SLC34A2O95436 690 aa12.59□□□□□ -0.39
UBE2N-202ENST00000548946 ARSIQ5FYB1 569 aa12.58□□□□□ -0.4
UBE2N-202ENST00000548946 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
UBE2N-202ENST00000548946 PDE4AP27815 886 aa12.57□□□□□ -0.4
UBE2N-202ENST00000548946 PLPP6Q8IY26 295 aa12.57□□□□□ -0.4
UBE2N-202ENST00000548946 ERBB3P21860 1342 aa12.57□□□□□ -0.4
UBE2N-202ENST00000548946 DSG2Q14126 1118 aa12.55□□□□□ -0.4
UBE2N-202ENST00000548946 SPRYD3Q8NCJ5 442 aa12.55□□□□□ -0.4
UBE2N-202ENST00000548946 CRISPLD2Q9H0B8 497 aa12.55□□□□□ -0.4
UBE2N-202ENST00000548946 POTEB3A0JP26 581 aa12.53□□□□□ -0.4
UBE2N-202ENST00000548946 POTEBQ6S5H4 581 aa12.53□□□□□ -0.4
UBE2N-202ENST00000548946 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
UBE2N-202ENST00000548946 NCKAP5LQ9HCH0 1330 aa12.5□□□□□ -0.41
UBE2N-202ENST00000548946 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
UBE2N-202ENST00000548946 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBE2N-202ENST00000548946 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
UBE2N-202ENST00000548946 PTCD2Q8WV60 388 aaKnown RBP12.48□□□□□ -0.41
UBE2N-202ENST00000548946 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
UBE2N-202ENST00000548946 TBC1D12O60347 775 aa12.47□□□□□ -0.41
UBE2N-202ENST00000548946 NUDT7P0C024 238 aa12.47□□□□□ -0.41
UBE2N-202ENST00000548946 ZNF316A6NFI3 1004 aaPredicted RBP12.46□□□□□ -0.41
UBE2N-202ENST00000548946 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
UBE2N-202ENST00000548946 DDX27Q96GQ7 796 aaKnown RBP12.46□□□□□ -0.41
UBE2N-202ENST00000548946 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
UBE2N-202ENST00000548946 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
UBE2N-202ENST00000548946 MFSD10Q14728 455 aa12.41□□□□□ -0.42
UBE2N-202ENST00000548946 ZNF687Q8N1G0 1237 aa12.41□□□□□ -0.42
UBE2N-202ENST00000548946 OXER1Q8TDS5 423 aa12.39□□□□□ -0.43
UBE2N-202ENST00000548946 LHX6Q9UPM6 363 aa12.39□□□□□ -0.43
UBE2N-202ENST00000548946 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.43
UBE2N-202ENST00000548946 KRTAP3-3Q9BYR6 98 aa12.38□□□□□ -0.43
UBE2N-202ENST00000548946 KRTAP3-2Q9BYR7 98 aa12.38□□□□□ -0.43
UBE2N-202ENST00000548946 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
UBE2N-202ENST00000548946 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
UBE2N-202ENST00000548946 SPNS2Q8IVW8 549 aa12.31□□□□□ -0.44
UBE2N-202ENST00000548946 MAP3K9P80192 1104 aa12.3□□□□□ -0.44
UBE2N-202ENST00000548946 PBX2P40425 430 aa12.28□□□□□ -0.44
UBE2N-202ENST00000548946 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
UBE2N-202ENST00000548946 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
UBE2N-202ENST00000548946 CAMK2BQ13554 666 aa12.25□□□□□ -0.45
UBE2N-202ENST00000548946 EVI5O60447 810 aa12.24□□□□□ -0.45
UBE2N-202ENST00000548946 MMRN1Q13201 1228 aa12.24□□□□□ -0.45
UBE2N-202ENST00000548946 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
UBE2N-202ENST00000548946 ANO8Q9HCE9 1232 aaPredicted RBP12.23□□□□□ -0.45
UBE2N-202ENST00000548946 ARHGAP33O14559 1287 aa12.2□□□□□ -0.46
UBE2N-202ENST00000548946 LSM11P83369 360 aaKnown RBP eCLIP12.2□□□□□ -0.46
UBE2N-202ENST00000548946 ANKRD13DQ6ZTN6 518 aa12.2□□□□□ -0.46
UBE2N-202ENST00000548946 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
UBE2N-202ENST00000548946 AXIN2Q9Y2T1 843 aa12.19□□□□□ -0.46
UBE2N-202ENST00000548946 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
UBE2N-202ENST00000548946 KCNH8Q96L42 1107 aa12.18□□□□□ -0.46
UBE2N-202ENST00000548946 FOSBP53539 338 aa12.17□□□□□ -0.46
UBE2N-202ENST00000548946 DPYSL4O14531 572 aa12.16□□□□□ -0.46
UBE2N-202ENST00000548946 E2F4Q16254 413 aa12.16□□□□□ -0.46
UBE2N-202ENST00000548946 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
UBE2N-202ENST00000548946 PTGER2P43116 358 aa12.15□□□□□ -0.46
UBE2N-202ENST00000548946 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
UBE2N-202ENST00000548946 PSEN2P49810 448 aa12.11□□□□□ -0.47
UBE2N-202ENST00000548946 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
UBE2N-202ENST00000548946 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
UBE2N-202ENST00000548946 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
UBE2N-202ENST00000548946 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
UBE2N-202ENST00000548946 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
UBE2N-202ENST00000548946 PHF14O94880 888 aa12.08□□□□□ -0.48
UBE2N-202ENST00000548946 PTPREP23469 700 aa12.08□□□□□ -0.48
UBE2N-202ENST00000548946 SPDYE16A6NNV3 312 aaPredicted RBP12.07□□□□□ -0.48
UBE2N-202ENST00000548946 TK2O00142 265 aa12.07□□□□□ -0.48
UBE2N-202ENST00000548946 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
UBE2N-202ENST00000548946 PCDHGA10Q9Y5H3 936 aa12.07□□□□□ -0.48
UBE2N-202ENST00000548946 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
UBE2N-202ENST00000548946 FBXW7Q969H0 707 aa12.06□□□□□ -0.48
UBE2N-202ENST00000548946 RNF166Q96A37 237 aaPredicted RBP12.06□□□□□ -0.48
UBE2N-202ENST00000548946 ARIH1Q9Y4X5 557 aaPredicted RBP12.06□□□□□ -0.48
UBE2N-202ENST00000548946 PDIA6Q15084 440 aa12.05□□□□□ -0.48
UBE2N-202ENST00000548946 TYW1BQ6NUM6 668 aa12.05□□□□□ -0.48
UBE2N-202ENST00000548946 ADAM33Q9BZ11 813 aa12.05□□□□□ -0.48
UBE2N-202ENST00000548946 EPAS1Q99814 870 aa12.04□□□□□ -0.48
UBE2N-202ENST00000548946 DDX12PQ92771 950 aa12.01□□□□□ -0.49
UBE2N-202ENST00000548946 STAC3Q96MF2 364 aa12□□□□□ -0.49
UBE2N-202ENST00000548946 SLC4A5Q9BY07 1137 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms