RNA–Protein interactions for RNA: ENST00000548836.1

USP15-210, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-210ENST00000548836 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
USP15-210ENST00000548836 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
USP15-210ENST00000548836 G3V3G9 751 aa13.24□□□□□ -0.29
USP15-210ENST00000548836 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
USP15-210ENST00000548836 GPHNQ9NQX3 736 aaPredicted RBP13.22□□□□□ -0.29
USP15-210ENST00000548836 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.29
USP15-210ENST00000548836 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.2□□□□□ -0.3
USP15-210ENST00000548836 MFSD10Q14728 455 aa13.19□□□□□ -0.3
USP15-210ENST00000548836 VSIG10Q8N0Z9 540 aa13.19□□□□□ -0.3
USP15-210ENST00000548836 PDE4AP27815 886 aa13.17□□□□□ -0.3
USP15-210ENST00000548836 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
USP15-210ENST00000548836 LARP6Q9BRS8 491 aaKnown RBP13.16□□□□□ -0.3
USP15-210ENST00000548836 DSG2Q14126 1118 aa13.15□□□□□ -0.3
USP15-210ENST00000548836 SCUBE2Q9NQ36 999 aa13.15□□□□□ -0.3
USP15-210ENST00000548836 FOXK1P85037 733 aa13.14□□□□□ -0.31
USP15-210ENST00000548836 TMC2Q8TDI7 906 aa13.13□□□□□ -0.31
USP15-210ENST00000548836 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
USP15-210ENST00000548836 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
USP15-210ENST00000548836 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
USP15-210ENST00000548836 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
USP15-210ENST00000548836 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
USP15-210ENST00000548836 HOXB3P14651 431 aaPredicted RBP13.02□□□□□ -0.33
USP15-210ENST00000548836 EMILIN3Q9NT22 766 aa13.02□□□□□ -0.33
USP15-210ENST00000548836 WDR70Q9NW82 654 aa13□□□□□ -0.33
USP15-210ENST00000548836 KCNV2Q8TDN2 545 aa12.99□□□□□ -0.33
USP15-210ENST00000548836 E2F4Q16254 413 aa12.98□□□□□ -0.33
USP15-210ENST00000548836 SLC34A2O95436 690 aa12.95□□□□□ -0.34
USP15-210ENST00000548836 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
USP15-210ENST00000548836 PTCD2Q8WV60 388 aaKnown RBP12.92□□□□□ -0.34
USP15-210ENST00000548836 ARIH1Q9Y4X5 557 aaPredicted RBP12.92□□□□□ -0.34
USP15-210ENST00000548836 KDM4FA0A1W2PPD8 638 aa12.87□□□□□ -0.35
USP15-210ENST00000548836 LCE2DQ5TA82 110 aaPredicted RBP12.87□□□□□ -0.35
USP15-210ENST00000548836 GPR153Q6NV75 609 aa12.87□□□□□ -0.35
USP15-210ENST00000548836 UPF1Q92900 1129 aaKnown RBP eCLIP12.87□□□□□ -0.35
USP15-210ENST00000548836 DPYSL4O14531 572 aa12.86□□□□□ -0.35
USP15-210ENST00000548836 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
USP15-210ENST00000548836 PCDHGA4Q9Y5G9 962 aa12.86□□□□□ -0.35
USP15-210ENST00000548836 ARHGEF1Q92888 912 aaKnown RBP12.85□□□□□ -0.35
USP15-210ENST00000548836 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
USP15-210ENST00000548836 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.356e-7■■■■□ 23.2
USP15-210ENST00000548836 SNPHO15079 494 aa12.83□□□□□ -0.36
USP15-210ENST00000548836 ARSIQ5FYB1 569 aa12.82□□□□□ -0.36
USP15-210ENST00000548836 ZSWIM6Q9HCJ5 1215 aa12.81□□□□□ -0.36
USP15-210ENST00000548836 ST18O60284 1047 aa12.8□□□□□ -0.36
USP15-210ENST00000548836 PDIA6Q15084 440 aa12.79□□□□□ -0.36
USP15-210ENST00000548836 HOXB1P14653 301 aaPredicted RBP12.78□□□□□ -0.36
USP15-210ENST00000548836 MAP3K9P80192 1104 aa12.78□□□□□ -0.36
USP15-210ENST00000548836 ZNF710Q8N1W2 664 aa12.76□□□□□ -0.37
USP15-210ENST00000548836 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
USP15-210ENST00000548836 EVI5O60447 810 aa12.75□□□□□ -0.37
USP15-210ENST00000548836 NUDT7P0C024 238 aa12.75□□□□□ -0.37
USP15-210ENST00000548836 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
USP15-210ENST00000548836 FAM163AQ96GL9 167 aaPredicted RBP12.74□□□□□ -0.37
USP15-210ENST00000548836 TBC1D12O60347 775 aa12.73□□□□□ -0.37
USP15-210ENST00000548836 SEMA3EO15041 775 aa12.72□□□□□ -0.37
USP15-210ENST00000548836 SPDYE16A6NNV3 312 aaPredicted RBP12.71□□□□□ -0.37
USP15-210ENST00000548836 MLLT3P42568 568 aaPredicted RBP12.68□□□□□ -0.38
USP15-210ENST00000548836 PTGER2P43116 358 aa12.68□□□□□ -0.38
USP15-210ENST00000548836 MARVELD3Q96A59 401 aa12.67□□□□□ -0.38
USP15-210ENST00000548836 LHX6Q9UPM6 363 aa12.67□□□□□ -0.38
USP15-210ENST00000548836 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
USP15-210ENST00000548836 POTEB3A0JP26 581 aa12.63□□□□□ -0.39
USP15-210ENST00000548836 PRIM1P49642 420 aaKnown RBP12.63□□□□□ -0.39
USP15-210ENST00000548836 POTEBQ6S5H4 581 aa12.63□□□□□ -0.39
USP15-210ENST00000548836 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
USP15-210ENST00000548836 DDX12PQ92771 950 aa12.61□□□□□ -0.39
USP15-210ENST00000548836 PCDHGA10Q9Y5H3 936 aa12.61□□□□□ -0.39
USP15-210ENST00000548836 FOSBP53539 338 aa12.6□□□□□ -0.39
USP15-210ENST00000548836 NBR1Q14596 966 aa12.59□□□□□ -0.39
USP15-210ENST00000548836 OSBPP22059 807 aa12.58□□□□□ -0.4
USP15-210ENST00000548836 BCANQ96GW7 911 aa12.58□□□□□ -0.4
USP15-210ENST00000548836 EMP3P54852 163 aa12.57□□□□□ -0.4
USP15-210ENST00000548836 JPH4Q96JJ6 628 aa12.57□□□□□ -0.4
USP15-210ENST00000548836 GRXCR2A6NFK2 248 aa12.56□□□□□ -0.4
USP15-210ENST00000548836 PHF14O94880 888 aa12.56□□□□□ -0.4
USP15-210ENST00000548836 FAM205CA6NFA0 338 aa12.54□□□□□ -0.4
USP15-210ENST00000548836 VARS2Q5ST30 1063 aaKnown RBP12.54□□□□□ -0.4
USP15-210ENST00000548836 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
USP15-210ENST00000548836 ERBB3P21860 1342 aa12.53□□□□□ -0.4
USP15-210ENST00000548836 POTEEQ6S8J3 1075 aa12.52□□□□□ -0.41
USP15-210ENST00000548836 HS3ST6Q96QI5 342 aa12.52□□□□□ -0.41
USP15-210ENST00000548836 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP15-210ENST00000548836 ADAM33Q9BZ11 813 aa12.51□□□□□ -0.41
USP15-210ENST00000548836 RBM26Q5T8P6 1007 aaKnown RBP12.49□□□□□ -0.41
USP15-210ENST00000548836 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
USP15-210ENST00000548836 ZDHHC16Q969W1 377 aa12.49□□□□□ -0.41
USP15-210ENST00000548836 EPAS1Q99814 870 aa12.49□□□□□ -0.41
USP15-210ENST00000548836 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
USP15-210ENST00000548836 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
USP15-210ENST00000548836 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
USP15-210ENST00000548836 TSR1Q2NL82 804 aaKnown RBP12.45□□□□□ -0.42
USP15-210ENST00000548836 POTEGQ6S5H5 508 aa12.45□□□□□ -0.42
USP15-210ENST00000548836 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
USP15-210ENST00000548836 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
USP15-210ENST00000548836 POTEMA6NI47 508 aa12.44□□□□□ -0.42
USP15-210ENST00000548836 ZNF687Q8N1G0 1237 aa12.44□□□□□ -0.42
USP15-210ENST00000548836 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
USP15-210ENST00000548836 SMYD5Q6GMV2 418 aa12.43□□□□□ -0.42
USP15-210ENST00000548836 CDHR5Q9HBB8 845 aa12.43□□□□□ -0.42
USP15-210ENST00000548836 GPR37O15354 613 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms