RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 TSHZ2Q9NRE2 1034 aa13.89□□□□□ -0.19
USP15-209ENST00000548620 SLAIN1Q8ND83 568 aa13.85□□□□□ -0.19
USP15-209ENST00000548620 KIF3CO14782 793 aa13.83□□□□□ -0.2
USP15-209ENST00000548620 HAP1P54257 671 aaPredicted RBP13.83□□□□□ -0.2
USP15-209ENST00000548620 CRISPLD2Q9H0B8 497 aa13.83□□□□□ -0.2
USP15-209ENST00000548620 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
USP15-209ENST00000548620 C2orf72A6NCS6 295 aa13.81□□□□□ -0.2
USP15-209ENST00000548620 TMC2Q8TDI7 906 aa13.8□□□□□ -0.2
USP15-209ENST00000548620 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
USP15-209ENST00000548620 PDE4AP27815 886 aa13.77□□□□□ -0.21
USP15-209ENST00000548620 MFSD10Q14728 455 aa13.73□□□□□ -0.21
USP15-209ENST00000548620 LARP6Q9BRS8 491 aaKnown RBP13.73□□□□□ -0.21
USP15-209ENST00000548620 FOXK1P85037 733 aa13.72□□□□□ -0.21
USP15-209ENST00000548620 DSG2Q14126 1118 aa13.72□□□□□ -0.21
USP15-209ENST00000548620 DDX27Q96GQ7 796 aaKnown RBP13.69□□□□□ -0.22
USP15-209ENST00000548620 PPP1R15BQ5SWA1 713 aa13.68□□□□□ -0.22
USP15-209ENST00000548620 PLPP6Q8IY26 295 aa13.67□□□□□ -0.22
USP15-209ENST00000548620 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
USP15-209ENST00000548620 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
USP15-209ENST00000548620 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
USP15-209ENST00000548620 SNPHO15079 494 aa13.61□□□□□ -0.23
USP15-209ENST00000548620 WDR70Q9NW82 654 aa13.6□□□□□ -0.23
USP15-209ENST00000548620 DOK7Q18PE1 504 aa13.58□□□□□ -0.24
USP15-209ENST00000548620 SLC24A1O60721 1099 aa13.56□□□□□ -0.24
USP15-209ENST00000548620 SLC34A2O95436 690 aa13.56□□□□□ -0.24
USP15-209ENST00000548620 CAMK2BQ13554 666 aa13.56□□□□□ -0.24
USP15-209ENST00000548620 E2F4Q16254 413 aa13.52□□□□□ -0.25
USP15-209ENST00000548620 EMILIN3Q9NT22 766 aa13.52□□□□□ -0.25
USP15-209ENST00000548620 PTCD2Q8WV60 388 aaKnown RBP13.51□□□□□ -0.25
USP15-209ENST00000548620 RIMBP2O15034 1052 aa13.5□□□□□ -0.25
USP15-209ENST00000548620 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
USP15-209ENST00000548620 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
USP15-209ENST00000548620 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
USP15-209ENST00000548620 ST18O60284 1047 aa13.48□□□□□ -0.25
USP15-209ENST00000548620 LCE2DQ5TA82 110 aaPredicted RBP13.48□□□□□ -0.25
USP15-209ENST00000548620 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
USP15-209ENST00000548620 FAM163AQ96GL9 167 aaPredicted RBP13.48□□□□□ -0.25
USP15-209ENST00000548620 GPR153Q6NV75 609 aa13.47□□□□□ -0.25
USP15-209ENST00000548620 PCDHGA4Q9Y5G9 962 aa13.47□□□□□ -0.25
USP15-209ENST00000548620 KCNV2Q8TDN2 545 aa13.46□□□□□ -0.25
USP15-209ENST00000548620 ARSIQ5FYB1 569 aa13.44□□□□□ -0.26
USP15-209ENST00000548620 HOXB1P14653 301 aaPredicted RBP13.43□□□□□ -0.26
USP15-209ENST00000548620 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.261e-6■■■□□ 19.2
USP15-209ENST00000548620 ARIH1Q9Y4X5 557 aaPredicted RBP13.42□□□□□ -0.26
USP15-209ENST00000548620 TBC1D12O60347 775 aa13.41□□□□□ -0.26
USP15-209ENST00000548620 P3H3Q8IVL6 736 aa13.41□□□□□ -0.26
USP15-209ENST00000548620 DPYSL4O14531 572 aa13.4□□□□□ -0.26
USP15-209ENST00000548620 KDM4FA0A1W2PPD8 638 aa13.39□□□□□ -0.27
USP15-209ENST00000548620 MAP3K9P80192 1104 aa13.39□□□□□ -0.27
USP15-209ENST00000548620 NUDT7P0C024 238 aa13.37□□□□□ -0.27
USP15-209ENST00000548620 ARHGEF1Q92888 912 aaKnown RBP13.36□□□□□ -0.27
USP15-209ENST00000548620 MARVELD3Q96A59 401 aa13.34□□□□□ -0.27
USP15-209ENST00000548620 EVI5O60447 810 aa13.33□□□□□ -0.28
USP15-209ENST00000548620 PDIA6Q15084 440 aa13.32□□□□□ -0.28
USP15-209ENST00000548620 EMP3P54852 163 aa13.3□□□□□ -0.28
USP15-209ENST00000548620 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
USP15-209ENST00000548620 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
USP15-209ENST00000548620 LHX6Q9UPM6 363 aa13.28□□□□□ -0.28
USP15-209ENST00000548620 ZNF316A6NFI3 1004 aaPredicted RBP13.27□□□□□ -0.29
USP15-209ENST00000548620 ERBB3P21860 1342 aa13.24□□□□□ -0.29
USP15-209ENST00000548620 FAM205CA6NFA0 338 aa13.22□□□□□ -0.29
USP15-209ENST00000548620 PTGER2P43116 358 aa13.21□□□□□ -0.29
USP15-209ENST00000548620 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
USP15-209ENST00000548620 VARS2Q5ST30 1063 aaKnown RBP13.2□□□□□ -0.3
USP15-209ENST00000548620 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
USP15-209ENST00000548620 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
USP15-209ENST00000548620 HS3ST6Q96QI5 342 aa13.2□□□□□ -0.3
USP15-209ENST00000548620 POTEMA6NI47 508 aa13.19□□□□□ -0.3
USP15-209ENST00000548620 PSDA5PKW4 1024 aaPredicted RBP13.18□□□□□ -0.3
USP15-209ENST00000548620 FOSBP53539 338 aa13.18□□□□□ -0.3
USP15-209ENST00000548620 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
USP15-209ENST00000548620 SEMA3EO15041 775 aa13.17□□□□□ -0.3
USP15-209ENST00000548620 DDX12PQ92771 950 aa13.17□□□□□ -0.3
USP15-209ENST00000548620 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
USP15-209ENST00000548620 PCDHGA10Q9Y5H3 936 aa13.15□□□□□ -0.3
USP15-209ENST00000548620 PHF14O94880 888 aa13.14□□□□□ -0.31
USP15-209ENST00000548620 MLLT3P42568 568 aaPredicted RBP13.14□□□□□ -0.31
USP15-209ENST00000548620 PPP4R3BQ5MIZ7 849 aa13.13□□□□□ -0.31
USP15-209ENST00000548620 TESPA1A2RU30 521 aaPredicted RBP13.12□□□□□ -0.31
USP15-209ENST00000548620 GRXCR2A6NFK2 248 aa13.12□□□□□ -0.31
USP15-209ENST00000548620 ZNF687Q8N1G0 1237 aa13.1□□□□□ -0.31
USP15-209ENST00000548620 EPAS1Q99814 870 aa13.1□□□□□ -0.31
USP15-209ENST00000548620 NBR1Q14596 966 aa13.09□□□□□ -0.31
USP15-209ENST00000548620 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
USP15-209ENST00000548620 ZDHHC16Q969W1 377 aa13.09□□□□□ -0.31
USP15-209ENST00000548620 OSBPP22059 807 aa13.07□□□□□ -0.32
USP15-209ENST00000548620 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
USP15-209ENST00000548620 FBXW7Q969H0 707 aa13.07□□□□□ -0.32
USP15-209ENST00000548620 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
USP15-209ENST00000548620 POTEEQ6S8J3 1075 aa13.06□□□□□ -0.32
USP15-209ENST00000548620 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
USP15-209ENST00000548620 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
USP15-209ENST00000548620 CDAN1Q8IWY9 1227 aa13.02□□□□□ -0.33
USP15-209ENST00000548620 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
USP15-209ENST00000548620 PBX2P40425 430 aa13□□□□□ -0.33
USP15-209ENST00000548620 SMYD5Q6GMV2 418 aa13□□□□□ -0.33
USP15-209ENST00000548620 MAP3K7O43318 606 aa12.99□□□□□ -0.33
USP15-209ENST00000548620 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
USP15-209ENST00000548620 ARHGAP33O14559 1287 aa12.98□□□□□ -0.33
USP15-209ENST00000548620 C6orf132Q5T0Z8 1188 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms