RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 FANCIQ9NVI1 1328 aa13.63□□□□□ -0.23
SMARCD1-205ENST00000548573 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
SMARCD1-205ENST00000548573 PRKRIP1Q9H875 184 aaPredicted RBP13.62□□□□□ -0.23
SMARCD1-205ENST00000548573 DNMT1P26358 1616 aaKnown RBP13.62□□□□□ -0.23
SMARCD1-205ENST00000548573 TEX14Q8IWB6 1497 aa13.62□□□□□ -0.23
SMARCD1-205ENST00000548573 DAPK1P53355 1430 aa13.62□□□□□ -0.23
SMARCD1-205ENST00000548573 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
SMARCD1-205ENST00000548573 SPATA31E1Q6ZUB1 1445 aa13.6□□□□□ -0.23
SMARCD1-205ENST00000548573 ZBED9Q6R2W3 1325 aa13.59□□□□□ -0.23
SMARCD1-205ENST00000548573 C11orf95C9JLR9 678 aaPredicted RBP13.59□□□□□ -0.23
SMARCD1-205ENST00000548573 CCDC184Q52MB2 194 aa13.59□□□□□ -0.23
SMARCD1-205ENST00000548573 ABCC5O15440 1437 aa13.59□□□□□ -0.23
SMARCD1-205ENST00000548573 MSH5O43196 834 aa13.57□□□□□ -0.24
SMARCD1-205ENST00000548573 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
SMARCD1-205ENST00000548573 NBPF8Q3BBV2 869 aa13.57□□□□□ -0.24
SMARCD1-205ENST00000548573 FOXD1Q16676 465 aa13.56□□□□□ -0.24
SMARCD1-205ENST00000548573 MRS2Q9HD23 443 aa13.56□□□□□ -0.24
SMARCD1-205ENST00000548573 KIF7Q2M1P5 1343 aa13.55□□□□□ -0.24
SMARCD1-205ENST00000548573 KIAA0556O60303 1618 aa13.54□□□□□ -0.24
SMARCD1-205ENST00000548573 FAM9BQ8IZU0 186 aa13.53□□□□□ -0.24
SMARCD1-205ENST00000548573 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
SMARCD1-205ENST00000548573 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.24
SMARCD1-205ENST00000548573 NUP153P49790 1475 aaKnown RBP13.52□□□□□ -0.24
SMARCD1-205ENST00000548573 DISP1Q96F81 1524 aa13.52□□□□□ -0.24
SMARCD1-205ENST00000548573 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.24
SMARCD1-205ENST00000548573 RAPGEF6Q8TEU7 1601 aa13.52□□□□□ -0.25
SMARCD1-205ENST00000548573 PZPP20742 1482 aa13.51□□□□□ -0.25
SMARCD1-205ENST00000548573 MBD5Q9P267 1494 aa13.51□□□□□ -0.25
SMARCD1-205ENST00000548573 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
SMARCD1-205ENST00000548573 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
SMARCD1-205ENST00000548573 ITSN2Q9NZM3 1697 aa13.49□□□□□ -0.25
SMARCD1-205ENST00000548573 ARID3CA6NKF2 412 aa13.48□□□□□ -0.25
SMARCD1-205ENST00000548573 AEBP2Q6ZN18 517 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-205ENST00000548573 ARID4BQ4LE39 1312 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-205ENST00000548573 ZNF644Q9H582 1327 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-205ENST00000548573 ADGRL2O95490 1459 aa13.48□□□□□ -0.25
SMARCD1-205ENST00000548573 DHX29Q7Z478 1369 aaKnown RBP13.48□□□□□ -0.25
SMARCD1-205ENST00000548573 SMG6Q86US8 1419 aaKnown RBP13.48□□□□□ -0.25
SMARCD1-205ENST00000548573 KIF14Q15058 1648 aa13.47□□□□□ -0.25
SMARCD1-205ENST00000548573 CAMSAP2Q08AD1 1489 aa13.47□□□□□ -0.25
SMARCD1-205ENST00000548573 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
SMARCD1-205ENST00000548573 TROQ12816 1431 aaPredicted RBP13.47□□□□□ -0.25
SMARCD1-205ENST00000548573 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
SMARCD1-205ENST00000548573 BCL11AQ9H165 835 aa13.46□□□□□ -0.25
SMARCD1-205ENST00000548573 CROCC2H7BZ55 1655 aa13.46□□□□□ -0.26
SMARCD1-205ENST00000548573 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
SMARCD1-205ENST00000548573 ERICH6Q7L0X2 663 aa13.45□□□□□ -0.26
SMARCD1-205ENST00000548573 B4GALNT3Q6L9W6 998 aa13.44□□□□□ -0.26
SMARCD1-205ENST00000548573 USP47Q96K76 1375 aa13.44□□□□□ -0.26
SMARCD1-205ENST00000548573 KDM5CP41229 1560 aa13.44□□□□□ -0.26
SMARCD1-205ENST00000548573 BCORL1Q5H9F3 1711 aa13.44□□□□□ -0.26
SMARCD1-205ENST00000548573 GPATCH8Q9UKJ3 1502 aaKnown RBP13.43□□□□□ -0.26
SMARCD1-205ENST00000548573 GRIN2AQ12879 1464 aa13.43□□□□□ -0.26
SMARCD1-205ENST00000548573 RNF123Q5XPI4 1314 aa13.43□□□□□ -0.26
SMARCD1-205ENST00000548573 UHRF1BP1Q6BDS2 1440 aa13.43□□□□□ -0.26
SMARCD1-205ENST00000548573 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
SMARCD1-205ENST00000548573 PRG4Q92954 1404 aaPredicted RBP13.42□□□□□ -0.26
SMARCD1-205ENST00000548573 CFDP1Q9UEE9 299 aaPredicted RBP13.42□□□□□ -0.26
SMARCD1-205ENST00000548573 NUDCQ9Y266 331 aa13.42□□□□□ -0.26
SMARCD1-205ENST00000548573 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
SMARCD1-205ENST00000548573 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
SMARCD1-205ENST00000548573 ANKRD30AQ9BXX3 1397 aa13.41□□□□□ -0.26
SMARCD1-205ENST00000548573 RALGAPBQ86X10 1494 aa13.4□□□□□ -0.26
SMARCD1-205ENST00000548573 ARHGEF12Q9NZN5 1544 aa13.39□□□□□ -0.27
SMARCD1-205ENST00000548573 PKD2Q13563 968 aa13.38□□□□□ -0.27
SMARCD1-205ENST00000548573 ANKRD50Q9ULJ7 1429 aa13.38□□□□□ -0.27
SMARCD1-205ENST00000548573 SHANK2Q9UPX8 1470 aa13.37□□□□□ -0.27
SMARCD1-205ENST00000548573 KDM5DQ9BY66 1539 aa13.37□□□□□ -0.27
SMARCD1-205ENST00000548573 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
SMARCD1-205ENST00000548573 EIF4G3O43432 1585 aaKnown RBP13.36□□□□□ -0.27
SMARCD1-205ENST00000548573 PNISRQ8TF01 805 aaKnown RBP13.36□□□□□ -0.27
SMARCD1-205ENST00000548573 PLB1Q6P1J6 1458 aa13.35□□□□□ -0.27
SMARCD1-205ENST00000548573 KIF15Q9NS87 1388 aa13.34□□□□□ -0.27
SMARCD1-205ENST00000548573 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
SMARCD1-205ENST00000548573 LRPPRCP42704 1394 aaKnown RBP13.33□□□□□ -0.28
SMARCD1-205ENST00000548573 CDC42BPAQ5VT25 1732 aa13.33□□□□□ -0.28
SMARCD1-205ENST00000548573 ZNF326Q5BKZ1 582 aaKnown RBP13.33□□□□□ -0.28
SMARCD1-205ENST00000548573 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
SMARCD1-205ENST00000548573 TMC1Q8TDI8 760 aa13.32□□□□□ -0.28
SMARCD1-205ENST00000548573 CCDC136Q96JN2 1154 aa13.32□□□□□ -0.28
SMARCD1-205ENST00000548573 POLR3GLQ9BT43 218 aa13.32□□□□□ -0.28
SMARCD1-205ENST00000548573 ZNF777Q9ULD5 760 aaPredicted RBP13.32□□□□□ -0.28
SMARCD1-205ENST00000548573 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
SMARCD1-205ENST00000548573 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
SMARCD1-205ENST00000548573 CARD11Q9BXL7 1154 aa13.32□□□□□ -0.28
SMARCD1-205ENST00000548573 E9PCH4 1651 aa13.31□□□□□ -0.28
SMARCD1-205ENST00000548573 ABCC10Q5T3U5 1492 aa13.31□□□□□ -0.28
SMARCD1-205ENST00000548573 C9orf84Q5VXU9 1444 aa13.31□□□□□ -0.28
SMARCD1-205ENST00000548573 NUP155O75694 1391 aa13.31□□□□□ -0.28
SMARCD1-205ENST00000548573 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
SMARCD1-205ENST00000548573 PTPRGP23470 1445 aa13.3□□□□□ -0.28
SMARCD1-205ENST00000548573 RALBP1Q15311 655 aa13.3□□□□□ -0.28
SMARCD1-205ENST00000548573 NOP58Q9Y2X3 529 aaKnown RBP13.3□□□□□ -0.28
SMARCD1-205ENST00000548573 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
SMARCD1-205ENST00000548573 ABCA8O94911 1581 aa13.28□□□□□ -0.28
SMARCD1-205ENST00000548573 ARHGEF5Q12774 1597 aa13.28□□□□□ -0.28
SMARCD1-205ENST00000548573 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.28
SMARCD1-205ENST00000548573 NUP160Q12769 1436 aa13.27□□□□□ -0.28
SMARCD1-205ENST00000548573 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
SMARCD1-205ENST00000548573 CNGB1Q14028 1251 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms