RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 TROQ12816 1431 aaPredicted RBP15.25■□□□□ 0.03
USP15-208ENST00000548524 LOC105371045A0A1W2PR82 267 aa15.24■□□□□ 0.03
USP15-208ENST00000548524 RAPGEF3O95398 923 aa15.24■□□□□ 0.03
USP15-208ENST00000548524 CCDC18Q5T9S5 1454 aa15.23■□□□□ 0.03
USP15-208ENST00000548524 KDM4FA0A1W2PPD8 638 aa15.23■□□□□ 0.03
USP15-208ENST00000548524 CEP162Q5TB80 1403 aa15.23■□□□□ 0.03
USP15-208ENST00000548524 PCF11O94913 1555 aaKnown RBP15.23■□□□□ 0.03
USP15-208ENST00000548524 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
USP15-208ENST00000548524 AKNAQ7Z591 1439 aa15.22■□□□□ 0.03
USP15-208ENST00000548524 FANCAO15360 1455 aa15.21■□□□□ 0.03
USP15-208ENST00000548524 FOXD4L1Q9NU39 408 aa15.21■□□□□ 0.03
USP15-208ENST00000548524 TTC37Q6PGP7 1564 aa15.2■□□□□ 0.02
USP15-208ENST00000548524 PLCH2O75038 1416 aa15.2■□□□□ 0.02
USP15-208ENST00000548524 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
USP15-208ENST00000548524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.2■□□□□ 0.026e-7■■■■□ 22.5
USP15-208ENST00000548524 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
USP15-208ENST00000548524 KIF14Q15058 1648 aa15.17■□□□□ 0.02
USP15-208ENST00000548524 CFAP74Q9C0B2 1584 aa15.15■□□□□ 0.02
USP15-208ENST00000548524 ADGRL1O94910 1474 aa15.15■□□□□ 0.02
USP15-208ENST00000548524 SCAPERQ9BY12 1400 aa15.14■□□□□ 0.01
USP15-208ENST00000548524 ARHGAP5Q13017 1502 aa15.12■□□□□ 0.01
USP15-208ENST00000548524 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
USP15-208ENST00000548524 LRRIQ1Q96JM4 1722 aa15.12■□□□□ 0.01
USP15-208ENST00000548524 ARID4BQ4LE39 1312 aaPredicted RBP15.12■□□□□ 0.01
USP15-208ENST00000548524 FRMPD1Q5SYB0 1578 aa15.11■□□□□ 0.01
USP15-208ENST00000548524 POGZQ7Z3K3 1410 aa15.09■□□□□ 0.01
USP15-208ENST00000548524 MYT1LQ9UL68 1186 aa15.08■□□□□ 0
USP15-208ENST00000548524 MYO5CQ9NQX4 1742 aa15.08■□□□□ 0
USP15-208ENST00000548524 ZNF777Q9ULD5 760 aaPredicted RBP15.07■□□□□ 0
USP15-208ENST00000548524 AFAP1Q8N556 730 aa15.06■□□□□ 0
USP15-208ENST00000548524 CCNB3Q8WWL7 1395 aa15.06■□□□□ 0
USP15-208ENST00000548524 VPS8Q8N3P4 1428 aa15.05■□□□□ -0
USP15-208ENST00000548524 MAGI2Q86UL8 1455 aa15.05■□□□□ -0
USP15-208ENST00000548524 ZMYM4Q5VZL5 1548 aa15.04■□□□□ -0
USP15-208ENST00000548524 ZFYVE16Q7Z3T8 1539 aa15.04■□□□□ -0
USP15-208ENST00000548524 YEATS2Q9ULM3 1422 aa15.04■□□□□ -0
USP15-208ENST00000548524 CFDP1Q9UEE9 299 aaPredicted RBP15.04■□□□□ -0
USP15-208ENST00000548524 RICTORQ6R327 1708 aa15.03■□□□□ -0
USP15-208ENST00000548524 ARHGEF40Q8TER5 1519 aa15.03■□□□□ -0
USP15-208ENST00000548524 ZNF518AQ6AHZ1 1483 aa15.03■□□□□ -0
USP15-208ENST00000548524 GPATCH8Q9UKJ3 1502 aaKnown RBP15.02■□□□□ -0
USP15-208ENST00000548524 PREX2Q70Z35 1606 aa15.01□□□□□ -0.01
USP15-208ENST00000548524 EHBP1L1Q8N3D4 1523 aa15.01□□□□□ -0.01
USP15-208ENST00000548524 MLECQ14165 292 aa14.99□□□□□ -0.01
USP15-208ENST00000548524 TRAPPC8Q9Y2L5 1435 aa14.99□□□□□ -0.01
USP15-208ENST00000548524 ABCC1P33527 1531 aa14.98□□□□□ -0.01
USP15-208ENST00000548524 CDC42BPBQ9Y5S2 1711 aa14.98□□□□□ -0.01
USP15-208ENST00000548524 ATP10AO60312 1499 aa14.98□□□□□ -0.01
USP15-208ENST00000548524 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.013e-7■■■■□ 24.5
USP15-208ENST00000548524 ARHGEF12Q9NZN5 1544 aa14.97□□□□□ -0.01
USP15-208ENST00000548524 APLP2Q06481 763 aa14.97□□□□□ -0.01
USP15-208ENST00000548524 C9orf84Q5VXU9 1444 aa14.97□□□□□ -0.01
USP15-208ENST00000548524 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
USP15-208ENST00000548524 CDC42BPAQ5VT25 1732 aa14.95□□□□□ -0.02
USP15-208ENST00000548524 KDM5CP41229 1560 aa14.95□□□□□ -0.02
USP15-208ENST00000548524 TIAM1Q13009 1591 aa14.95□□□□□ -0.02
USP15-208ENST00000548524 MYCNP04198 464 aaPredicted RBP14.95□□□□□ -0.02
USP15-208ENST00000548524 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
USP15-208ENST00000548524 MLH3Q9UHC1 1453 aa14.95□□□□□ -0.02
USP15-208ENST00000548524 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
USP15-208ENST00000548524 KIAA1107Q9UPP5 1409 aa14.94□□□□□ -0.02
USP15-208ENST00000548524 NCOA2Q15596 1464 aa14.94□□□□□ -0.02
USP15-208ENST00000548524 SYCP2Q9BX26 1530 aa14.93□□□□□ -0.02
USP15-208ENST00000548524 PTPRMP28827 1452 aa14.93□□□□□ -0.02
USP15-208ENST00000548524 SAMD9LQ8IVG5 1584 aa14.93□□□□□ -0.02
USP15-208ENST00000548524 ZNF644Q9H582 1327 aaPredicted RBP14.92□□□□□ -0.02
USP15-208ENST00000548524 BCORL1Q5H9F3 1711 aa14.92□□□□□ -0.02
USP15-208ENST00000548524 KANK4Q5T7N3 995 aaPredicted RBP14.92□□□□□ -0.02
USP15-208ENST00000548524 LRRC9Q6ZRR7 1453 aa14.92□□□□□ -0.02
USP15-208ENST00000548524 HECW2Q9P2P5 1572 aa14.92□□□□□ -0.02
USP15-208ENST00000548524 ADAMTSL3P82987 1691 aa14.92□□□□□ -0.02
USP15-208ENST00000548524 ITSN2Q9NZM3 1697 aa14.9□□□□□ -0.02
USP15-208ENST00000548524 MAP3K1Q13233 1512 aa14.9□□□□□ -0.02
USP15-208ENST00000548524 SUPT6HQ7KZ85 1726 aaKnown RBP14.89□□□□□ -0.03
USP15-208ENST00000548524 MADDQ8WXG6 1647 aa14.89□□□□□ -0.03
USP15-208ENST00000548524 DIP2CQ9Y2E4 1556 aa14.88□□□□□ -0.03
USP15-208ENST00000548524 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
USP15-208ENST00000548524 ESF1Q9H501 851 aaKnown RBP14.86□□□□□ -0.03
USP15-208ENST00000548524 ABCA6Q8N139 1617 aa14.85□□□□□ -0.03
USP15-208ENST00000548524 RSPH4AQ5TD94 716 aa14.85□□□□□ -0.03
USP15-208ENST00000548524 SIGLEC1Q9BZZ2 1709 aa14.85□□□□□ -0.03
USP15-208ENST00000548524 MBD5Q9P267 1494 aa14.84□□□□□ -0.03
USP15-208ENST00000548524 REREQ9P2R6 1566 aa14.84□□□□□ -0.03
USP15-208ENST00000548524 CAMSAP2Q08AD1 1489 aa14.83□□□□□ -0.03
USP15-208ENST00000548524 ATP7AQ04656 1500 aa14.83□□□□□ -0.04
USP15-208ENST00000548524 RIMS1Q86UR5 1692 aaKnown RBP14.83□□□□□ -0.04
USP15-208ENST00000548524 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.04
USP15-208ENST00000548524 AGLP35573 1532 aa14.82□□□□□ -0.04
USP15-208ENST00000548524 TSPY4P0CV99 314 aa14.82□□□□□ -0.04
USP15-208ENST00000548524 TSPY10P0CW01 314 aa14.82□□□□□ -0.04
USP15-208ENST00000548524 CCDC141Q6ZP82 1450 aa14.82□□□□□ -0.04
USP15-208ENST00000548524 MYOM3Q5VTT5 1437 aa14.81□□□□□ -0.04
USP15-208ENST00000548524 A2MP01023 1474 aa14.81□□□□□ -0.04
USP15-208ENST00000548524 CEBPAP49715 358 aaPredicted RBP14.8□□□□□ -0.04
USP15-208ENST00000548524 RTEL1-TNFRSF6BF6WH68 1400 aa14.8□□□□□ -0.04
USP15-208ENST00000548524 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
USP15-208ENST00000548524 INO80Q9ULG1 1556 aaPredicted RBP14.78□□□□□ -0.04
USP15-208ENST00000548524 GGT6Q6P531 493 aa14.78□□□□□ -0.04
USP15-208ENST00000548524 FER1L4A9Z1Z3 1794 aa14.77□□□□□ -0.05
USP15-208ENST00000548524 CNTLNQ9NXG0 1405 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms