RNA–Protein interactions for RNA: ENST00000548486.1

RDH5-206, Transcript of retinol dehydrogenase 5, humanhuman

TSL 2

Gene RDH5, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH5-206ENST00000548486 COL17A1Q9UMD9 1497 aaPredicted RBP23.56■■□□□ 1.36
RDH5-206ENST00000548486 EFCAB2Q5VUJ9 269 aa23.54■■□□□ 1.36
RDH5-206ENST00000548486 ARHGAP5Q13017 1502 aa23.54■■□□□ 1.36
RDH5-206ENST00000548486 GPATCH8Q9UKJ3 1502 aaKnown RBP23.54■■□□□ 1.36
RDH5-206ENST00000548486 AKNAQ7Z591 1439 aa23.53■■□□□ 1.36
RDH5-206ENST00000548486 NCOA2Q15596 1464 aa23.53■■□□□ 1.36
RDH5-206ENST00000548486 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
RDH5-206ENST00000548486 ITSN2Q9NZM3 1697 aa23.5■■□□□ 1.35
RDH5-206ENST00000548486 ADGRL1O94910 1474 aa23.46■■□□□ 1.35
RDH5-206ENST00000548486 CFDP1Q9UEE9 299 aaPredicted RBP23.44■■□□□ 1.34
RDH5-206ENST00000548486 RICTORQ6R327 1708 aa23.44■■□□□ 1.34
RDH5-206ENST00000548486 DENND4BO75064 1496 aaPredicted RBP23.43■■□□□ 1.34
RDH5-206ENST00000548486 SCAPERQ9BY12 1400 aa23.42■■□□□ 1.34
RDH5-206ENST00000548486 FRMPD1Q5SYB0 1578 aa23.41■■□□□ 1.34
RDH5-206ENST00000548486 SAMD9LQ8IVG5 1584 aa23.41■■□□□ 1.34
RDH5-206ENST00000548486 ABCC1P33527 1531 aa23.4■■□□□ 1.34
RDH5-206ENST00000548486 RAPGEF3O95398 923 aa23.39■■□□□ 1.33
RDH5-206ENST00000548486 MYOM3Q5VTT5 1437 aa23.37■■□□□ 1.33
RDH5-206ENST00000548486 POGZQ7Z3K3 1410 aa23.37■■□□□ 1.33
RDH5-206ENST00000548486 ZNF777Q9ULD5 760 aaPredicted RBP23.37■■□□□ 1.33
RDH5-206ENST00000548486 PLEKHH2Q8IVE3 1493 aa23.36■■□□□ 1.33
RDH5-206ENST00000548486 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
RDH5-206ENST00000548486 KIAA1107Q9UPP5 1409 aa23.34■■□□□ 1.33
RDH5-206ENST00000548486 ZMYM4Q5VZL5 1548 aa23.34■■□□□ 1.33
RDH5-206ENST00000548486 MIA2Q96PC5 1412 aa23.33■■□□□ 1.33
RDH5-206ENST00000548486 ZNF518AQ6AHZ1 1483 aa23.33■■□□□ 1.33
RDH5-206ENST00000548486 SYCP2Q9BX26 1530 aa23.33■■□□□ 1.32
RDH5-206ENST00000548486 KDM5CP41229 1560 aa23.31■■□□□ 1.32
RDH5-206ENST00000548486 ZNF644Q9H582 1327 aaPredicted RBP23.31■■□□□ 1.32
RDH5-206ENST00000548486 TRAPPC8Q9Y2L5 1435 aa23.3■■□□□ 1.32
RDH5-206ENST00000548486 CAMSAP2Q08AD1 1489 aa23.3■■□□□ 1.32
RDH5-206ENST00000548486 HNRNPMP52272 730 aaKnown RBP eCLIP23.28■■□□□ 1.32
RDH5-206ENST00000548486 AFAP1Q8N556 730 aa23.28■■□□□ 1.32
RDH5-206ENST00000548486 MAGI2Q86UL8 1455 aa23.28■■□□□ 1.32
RDH5-206ENST00000548486 MBD5Q9P267 1494 aa23.27■■□□□ 1.32
RDH5-206ENST00000548486 FGD6Q6ZV73 1430 aa23.25■■□□□ 1.31
RDH5-206ENST00000548486 PTPN23Q9H3S7 1636 aa23.24■■□□□ 1.31
RDH5-206ENST00000548486 PPARGC1BQ86YN6 1023 aaKnown RBP23.24■■□□□ 1.31
RDH5-206ENST00000548486 ARHGEF40Q8TER5 1519 aa23.23■■□□□ 1.31
RDH5-206ENST00000548486 HECW2Q9P2P5 1572 aa23.23■■□□□ 1.31
RDH5-206ENST00000548486 MLH3Q9UHC1 1453 aa23.23■■□□□ 1.31
RDH5-206ENST00000548486 ZFYVE16Q7Z3T8 1539 aa23.23■■□□□ 1.31
RDH5-206ENST00000548486 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
RDH5-206ENST00000548486 RSPH4AQ5TD94 716 aa23.21■■□□□ 1.31
RDH5-206ENST00000548486 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
RDH5-206ENST00000548486 YEATS2Q9ULM3 1422 aa23.2■■□□□ 1.3
RDH5-206ENST00000548486 KIDINS220Q9ULH0 1771 aa23.19■■□□□ 1.3
RDH5-206ENST00000548486 CCDC141Q6ZP82 1450 aa23.19■■□□□ 1.3
RDH5-206ENST00000548486 SPAG9O60271 1321 aaKnown RBP23.17■■□□□ 1.3
RDH5-206ENST00000548486 INO80Q9ULG1 1556 aaPredicted RBP23.16■■□□□ 1.3
RDH5-206ENST00000548486 DIP2CQ9Y2E4 1556 aa23.14■■□□□ 1.3
RDH5-206ENST00000548486 ATP7AQ04656 1500 aa23.14■■□□□ 1.3
RDH5-206ENST00000548486 ABCA6Q8N139 1617 aa23.14■■□□□ 1.29
RDH5-206ENST00000548486 ATP10AO60312 1499 aa23.13■■□□□ 1.29
RDH5-206ENST00000548486 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
RDH5-206ENST00000548486 RTEL1-TNFRSF6BF6WH68 1400 aa23.13■■□□□ 1.29
RDH5-206ENST00000548486 DNMT1P26358 1616 aaKnown RBP23.11■■□□□ 1.29
RDH5-206ENST00000548486 REREQ9P2R6 1566 aa23.1■■□□□ 1.29
RDH5-206ENST00000548486 MAST1Q9Y2H9 1570 aa23.1■■□□□ 1.29
RDH5-206ENST00000548486 CROCC2H7BZ55 1655 aa23.09■■□□□ 1.29
RDH5-206ENST00000548486 C9orf84Q5VXU9 1444 aa23.09■■□□□ 1.29
RDH5-206ENST00000548486 TSPY4P0CV99 314 aa23.09■■□□□ 1.29
RDH5-206ENST00000548486 TSPY10P0CW01 314 aa23.09■■□□□ 1.29
RDH5-206ENST00000548486 SIGLEC1Q9BZZ2 1709 aa23.08■■□□□ 1.28
RDH5-206ENST00000548486 ABCC5O15440 1437 aa23.08■■□□□ 1.28
RDH5-206ENST00000548486 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
RDH5-206ENST00000548486 DAPK1P53355 1430 aa23.07■■□□□ 1.28
RDH5-206ENST00000548486 ADGBQ8N7X0 1667 aa23.06■■□□□ 1.28
RDH5-206ENST00000548486 SHANK2Q9UPX8 1470 aa23.05■■□□□ 1.28
RDH5-206ENST00000548486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.28
RDH5-206ENST00000548486 RRBP1Q9P2E9 1410 aaKnown RBP23.05■■□□□ 1.28
RDH5-206ENST00000548486 BCORL1Q5H9F3 1711 aa23.01■■□□□ 1.27
RDH5-206ENST00000548486 AGLP35573 1532 aa23.01■■□□□ 1.27
RDH5-206ENST00000548486 ARID4BQ4LE39 1312 aaPredicted RBP23.01■■□□□ 1.27
RDH5-206ENST00000548486 A2MP01023 1474 aa23■■□□□ 1.27
RDH5-206ENST00000548486 PLXNC1O60486 1568 aa23■■□□□ 1.27
RDH5-206ENST00000548486 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
RDH5-206ENST00000548486 DHX29Q7Z478 1369 aaKnown RBP22.96■■□□□ 1.27
RDH5-206ENST00000548486 ADAMTSL3P82987 1691 aa22.96■■□□□ 1.27
RDH5-206ENST00000548486 ADGRL2O95490 1459 aa22.93■■□□□ 1.26
RDH5-206ENST00000548486 PTPRKQ15262 1439 aa22.92■■□□□ 1.26
RDH5-206ENST00000548486 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
RDH5-206ENST00000548486 ANKRD30AQ9BXX3 1397 aa22.91■■□□□ 1.26
RDH5-206ENST00000548486 CHIC2Q9UKJ5 165 aa22.91■■□□□ 1.26
RDH5-206ENST00000548486 KIF15Q9NS87 1388 aa22.9■■□□□ 1.26
RDH5-206ENST00000548486 DUOX2Q9NRD8 1548 aa22.9■■□□□ 1.26
RDH5-206ENST00000548486 MLECQ14165 292 aa22.88■■□□□ 1.25
RDH5-206ENST00000548486 MADDQ8WXG6 1647 aa22.88■■□□□ 1.25
RDH5-206ENST00000548486 FER1L4A9Z1Z3 1794 aa22.87■■□□□ 1.25
RDH5-206ENST00000548486 RRP7BPQ9NSQ0 103 aa22.87■■□□□ 1.25
RDH5-206ENST00000548486 EIF2AK4Q9P2K8 1649 aaKnown RBP22.86■■□□□ 1.25
RDH5-206ENST00000548486 ROCK1Q13464 1354 aa22.86■■□□□ 1.25
RDH5-206ENST00000548486 ITGAEP38570 1179 aa22.85■■□□□ 1.25
RDH5-206ENST00000548486 ERBINQ96RT1 1412 aa22.83■■□□□ 1.25
RDH5-206ENST00000548486 KIF3BO15066 747 aa22.83■■□□□ 1.25
RDH5-206ENST00000548486 RIMS1Q86UR5 1692 aaKnown RBP22.83■■□□□ 1.24
RDH5-206ENST00000548486 RNF17Q9BXT8 1623 aaKnown RBP22.81■■□□□ 1.24
RDH5-206ENST00000548486 GGT6Q6P531 493 aa22.79■■□□□ 1.24
RDH5-206ENST00000548486 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
RDH5-206ENST00000548486 PTPRMP28827 1452 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms