RNA–Protein interactions for RNA: ENST00000548453.5

PPFIA2-210, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-210ENST00000548453 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
PPFIA2-210ENST00000548453 WDR70Q9NW82 654 aa11.38□□□□□ -0.59
PPFIA2-210ENST00000548453 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
PPFIA2-210ENST00000548453 GPHNQ9NQX3 736 aaPredicted RBP11.37□□□□□ -0.59
PPFIA2-210ENST00000548453 G3V3G9 751 aa11.35□□□□□ -0.59
PPFIA2-210ENST00000548453 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
PPFIA2-210ENST00000548453 KIF3CO14782 793 aa11.34□□□□□ -0.59
PPFIA2-210ENST00000548453 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
PPFIA2-210ENST00000548453 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
PPFIA2-210ENST00000548453 C2orf72A6NCS6 295 aa11.33□□□□□ -0.6
PPFIA2-210ENST00000548453 BCANQ96GW7 911 aa11.33□□□□□ -0.6
PPFIA2-210ENST00000548453 DSG2Q14126 1118 aa11.32□□□□□ -0.6
PPFIA2-210ENST00000548453 E2F4Q16254 413 aa11.3□□□□□ -0.6
PPFIA2-210ENST00000548453 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
PPFIA2-210ENST00000548453 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
PPFIA2-210ENST00000548453 FOXK1P85037 733 aa11.28□□□□□ -0.6
PPFIA2-210ENST00000548453 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
PPFIA2-210ENST00000548453 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
PPFIA2-210ENST00000548453 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
PPFIA2-210ENST00000548453 PLPP6Q8IY26 295 aa11.24□□□□□ -0.61
PPFIA2-210ENST00000548453 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
PPFIA2-210ENST00000548453 NBR1Q14596 966 aa11.22□□□□□ -0.61
PPFIA2-210ENST00000548453 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
PPFIA2-210ENST00000548453 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.2□□□□□ -0.62
PPFIA2-210ENST00000548453 ARIH1Q9Y4X5 557 aaPredicted RBP11.18□□□□□ -0.62
PPFIA2-210ENST00000548453 DPYSL4O14531 572 aa11.15□□□□□ -0.62
PPFIA2-210ENST00000548453 SEMA3EO15041 775 aa11.13□□□□□ -0.63
PPFIA2-210ENST00000548453 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
PPFIA2-210ENST00000548453 OXER1Q8TDS5 423 aa11.1□□□□□ -0.63
PPFIA2-210ENST00000548453 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
PPFIA2-210ENST00000548453 SCUBE2Q9NQ36 999 aa11.08□□□□□ -0.64
PPFIA2-210ENST00000548453 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
PPFIA2-210ENST00000548453 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
PPFIA2-210ENST00000548453 PRKCSHP14314 528 aaPredicted RBP11.06□□□□□ -0.64
PPFIA2-210ENST00000548453 PDIA6Q15084 440 aa11.06□□□□□ -0.64
PPFIA2-210ENST00000548453 MAMSTRQ6ZN01 415 aa11.06□□□□□ -0.64
PPFIA2-210ENST00000548453 SLC34A2O95436 690 aa11.05□□□□□ -0.64
PPFIA2-210ENST00000548453 PTCD2Q8WV60 388 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-210ENST00000548453 HOXB3P14651 431 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-210ENST00000548453 MLLT3P42568 568 aaPredicted RBP11.04□□□□□ -0.64
PPFIA2-210ENST00000548453 MAP3K9P80192 1104 aa11.04□□□□□ -0.64
PPFIA2-210ENST00000548453 LHX8Q68G74 356 aa11.03□□□□□ -0.64
PPFIA2-210ENST00000548453 SPDYE16A6NNV3 312 aaPredicted RBP11.01□□□□□ -0.65
PPFIA2-210ENST00000548453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.01□□□□□ -0.65
PPFIA2-210ENST00000548453 TPRNQ4KMQ1 711 aa10.99□□□□□ -0.65
PPFIA2-210ENST00000548453 PCDHGA4Q9Y5G9 962 aa10.99□□□□□ -0.65
PPFIA2-210ENST00000548453 EVI5O60447 810 aa10.98□□□□□ -0.65
PPFIA2-210ENST00000548453 LMOD2Q6P5Q4 547 aa10.97□□□□□ -0.65
PPFIA2-210ENST00000548453 KDM4FA0A1W2PPD8 638 aa10.96□□□□□ -0.65
PPFIA2-210ENST00000548453 KHSRPQ92945 711 aaKnown RBP eCLIP10.96□□□□□ -0.65
PPFIA2-210ENST00000548453 TBC1D12O60347 775 aa10.95□□□□□ -0.66
PPFIA2-210ENST00000548453 DOK7Q18PE1 504 aa10.93□□□□□ -0.66
PPFIA2-210ENST00000548453 GPR153Q6NV75 609 aa10.93□□□□□ -0.66
PPFIA2-210ENST00000548453 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
PPFIA2-210ENST00000548453 GRXCR2A6NFK2 248 aa10.92□□□□□ -0.66
PPFIA2-210ENST00000548453 PTGER2P43116 358 aa10.92□□□□□ -0.66
PPFIA2-210ENST00000548453 ARSIQ5FYB1 569 aa10.92□□□□□ -0.66
PPFIA2-210ENST00000548453 RBM26Q5T8P6 1007 aaKnown RBP10.92□□□□□ -0.66
PPFIA2-210ENST00000548453 DDX12PQ92771 950 aa10.92□□□□□ -0.66
PPFIA2-210ENST00000548453 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
PPFIA2-210ENST00000548453 NUDT7P0C024 238 aa10.89□□□□□ -0.67
PPFIA2-210ENST00000548453 SMYD5Q6GMV2 418 aa10.89□□□□□ -0.67
PPFIA2-210ENST00000548453 OSBPP22059 807 aa10.88□□□□□ -0.67
PPFIA2-210ENST00000548453 TULP1O00294 542 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-210ENST00000548453 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
PPFIA2-210ENST00000548453 ZNF710Q8N1W2 664 aa10.86□□□□□ -0.67
PPFIA2-210ENST00000548453 RIMBP2O15034 1052 aa10.85□□□□□ -0.67
PPFIA2-210ENST00000548453 SNPHO15079 494 aa10.84□□□□□ -0.67
PPFIA2-210ENST00000548453 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
PPFIA2-210ENST00000548453 PCDHGA10Q9Y5H3 936 aa10.84□□□□□ -0.67
PPFIA2-210ENST00000548453 ZNF316A6NFI3 1004 aaPredicted RBP10.83□□□□□ -0.68
PPFIA2-210ENST00000548453 HOXB1P14653 301 aaPredicted RBP10.81□□□□□ -0.68
PPFIA2-210ENST00000548453 GPR37O15354 613 aa10.8□□□□□ -0.68
PPFIA2-210ENST00000548453 PHF14O94880 888 aa10.8□□□□□ -0.68
PPFIA2-210ENST00000548453 FOSBP53539 338 aa10.8□□□□□ -0.68
PPFIA2-210ENST00000548453 LHX6Q9UPM6 363 aa10.8□□□□□ -0.68
PPFIA2-210ENST00000548453 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
PPFIA2-210ENST00000548453 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
PPFIA2-210ENST00000548453 ZNF454Q8N9F8 522 aa10.77□□□□□ -0.69
PPFIA2-210ENST00000548453 ST18O60284 1047 aa10.76□□□□□ -0.69
PPFIA2-210ENST00000548453 EN1Q05925 392 aaPredicted RBP10.76□□□□□ -0.69
PPFIA2-210ENST00000548453 RBM33Q96EV2 1170 aaKnown RBP10.76□□□□□ -0.69
PPFIA2-210ENST00000548453 EPAS1Q99814 870 aa10.76□□□□□ -0.69
PPFIA2-210ENST00000548453 NUTM2FA1L443 756 aa10.75□□□□□ -0.69
PPFIA2-210ENST00000548453 ZMYND10O75800 440 aa10.75□□□□□ -0.69
PPFIA2-210ENST00000548453 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
PPFIA2-210ENST00000548453 CDHR5Q9HBB8 845 aa10.75□□□□□ -0.69
PPFIA2-210ENST00000548453 TSR1Q2NL82 804 aaKnown RBP10.74□□□□□ -0.69
PPFIA2-210ENST00000548453 ADAM33Q9BZ11 813 aa10.73□□□□□ -0.69
PPFIA2-210ENST00000548453 MAP3K7O43318 606 aa10.72□□□□□ -0.69
PPFIA2-210ENST00000548453 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
PPFIA2-210ENST00000548453 ZDHHC16Q969W1 377 aa10.72□□□□□ -0.69
PPFIA2-210ENST00000548453 NPDC1Q9NQX5 325 aaPredicted RBP10.72□□□□□ -0.69
PPFIA2-210ENST00000548453 PTGDRQ13258 359 aa10.7□□□□□ -0.7
PPFIA2-210ENST00000548453 BARGINQ6ZT62 677 aa10.7□□□□□ -0.7
PPFIA2-210ENST00000548453 FBXW7Q969H0 707 aa10.7□□□□□ -0.7
PPFIA2-210ENST00000548453 FECHP22830 423 aa10.69□□□□□ -0.7
PPFIA2-210ENST00000548453 MARVELD3Q96A59 401 aa10.69□□□□□ -0.7
PPFIA2-210ENST00000548453 FAM163AQ96GL9 167 aaPredicted RBP10.69□□□□□ -0.7
PPFIA2-210ENST00000548453 C6orf132Q5T0Z8 1188 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms