RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 CCDC18Q5T9S5 1454 aa20.58■□□□□ 0.89
GCN1-204ENST00000548132 PLEKHD1A6NEE1 506 aa20.58■□□□□ 0.89
GCN1-204ENST00000548132 PLCH2O75038 1416 aa20.58■□□□□ 0.88
GCN1-204ENST00000548132 ZFYVE16Q7Z3T8 1539 aa20.58■□□□□ 0.88
GCN1-204ENST00000548132 KDM5CP41229 1560 aa20.56■□□□□ 0.88
GCN1-204ENST00000548132 ITSN2Q9NZM3 1697 aa20.55■□□□□ 0.88
GCN1-204ENST00000548132 CLIP1P30622 1438 aa20.54■□□□□ 0.88
GCN1-204ENST00000548132 YEATS2Q9ULM3 1422 aa20.54■□□□□ 0.88
GCN1-204ENST00000548132 RIMS1Q86UR5 1692 aaKnown RBP20.54■□□□□ 0.88
GCN1-204ENST00000548132 ABCC1P33527 1531 aa20.53■□□□□ 0.88
GCN1-204ENST00000548132 ARHGAP5Q13017 1502 aa20.5■□□□□ 0.87
GCN1-204ENST00000548132 ABCA6Q8N139 1617 aa20.49■□□□□ 0.87
GCN1-204ENST00000548132 PTPRMP28827 1452 aa20.49■□□□□ 0.87
GCN1-204ENST00000548132 FER1L4A9Z1Z3 1794 aa20.49■□□□□ 0.87
GCN1-204ENST00000548132 DIP2CQ9Y2E4 1556 aa20.48■□□□□ 0.87
GCN1-204ENST00000548132 MAGI2Q86UL8 1455 aa20.48■□□□□ 0.87
GCN1-204ENST00000548132 SCAPERQ9BY12 1400 aa20.47■□□□□ 0.87
GCN1-204ENST00000548132 SAMD9LQ8IVG5 1584 aa20.46■□□□□ 0.87
GCN1-204ENST00000548132 ARHGEF12Q9NZN5 1544 aa20.45■□□□□ 0.86
GCN1-204ENST00000548132 ZNF518AQ6AHZ1 1483 aa20.43■□□□□ 0.86
GCN1-204ENST00000548132 REREQ9P2R6 1566 aa20.42■□□□□ 0.86
GCN1-204ENST00000548132 ATP1B4Q9UN42 357 aaPredicted RBP20.41■□□□□ 0.86
GCN1-204ENST00000548132 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
GCN1-204ENST00000548132 KIDINS220Q9ULH0 1771 aa20.41■□□□□ 0.86
GCN1-204ENST00000548132 TIAM1Q13009 1591 aa20.38■□□□□ 0.85
GCN1-204ENST00000548132 SYCP2Q9BX26 1530 aa20.37■□□□□ 0.85
GCN1-204ENST00000548132 C9orf84Q5VXU9 1444 aa20.37■□□□□ 0.85
GCN1-204ENST00000548132 CDK11AQ9UQ88 783 aaPredicted RBP20.37■□□□□ 0.85
GCN1-204ENST00000548132 EHBP1L1Q8N3D4 1523 aa20.37■□□□□ 0.85
GCN1-204ENST00000548132 INO80Q9ULG1 1556 aaPredicted RBP20.35■□□□□ 0.85
GCN1-204ENST00000548132 LMTK3Q96Q04 1460 aa20.35■□□□□ 0.85
GCN1-204ENST00000548132 TRAPPC8Q9Y2L5 1435 aa20.35■□□□□ 0.85
GCN1-204ENST00000548132 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
GCN1-204ENST00000548132 ATP10AO60312 1499 aa20.34■□□□□ 0.85
GCN1-204ENST00000548132 MLH3Q9UHC1 1453 aa20.33■□□□□ 0.85
GCN1-204ENST00000548132 EFCAB2Q5VUJ9 269 aa20.32■□□□□ 0.84
GCN1-204ENST00000548132 PLXNC1O60486 1568 aa20.28■□□□□ 0.84
GCN1-204ENST00000548132 AGLP35573 1532 aa20.27■□□□□ 0.84
GCN1-204ENST00000548132 PREX1Q8TCU6 1659 aa20.26■□□□□ 0.83
GCN1-204ENST00000548132 ARID4BQ4LE39 1312 aaPredicted RBP20.26■□□□□ 0.83
GCN1-204ENST00000548132 C3P01024 1663 aa20.26■□□□□ 0.83
GCN1-204ENST00000548132 SUPT6HQ7KZ85 1726 aaKnown RBP20.24■□□□□ 0.83
GCN1-204ENST00000548132 ATP7AQ04656 1500 aa20.24■□□□□ 0.83
GCN1-204ENST00000548132 AFAP1Q8N556 730 aa20.24■□□□□ 0.83
GCN1-204ENST00000548132 ADGBQ8N7X0 1667 aa20.22■□□□□ 0.83
GCN1-204ENST00000548132 MROH2AA6NES4 1674 aa20.19■□□□□ 0.82
GCN1-204ENST00000548132 MTUS2Q5JR59 1369 aa20.19■□□□□ 0.82
GCN1-204ENST00000548132 VPS8Q8N3P4 1428 aa20.19■□□□□ 0.82
GCN1-204ENST00000548132 KIAA1107Q9UPP5 1409 aa20.19■□□□□ 0.82
GCN1-204ENST00000548132 PLEKHH2Q8IVE3 1493 aa20.18■□□□□ 0.82
GCN1-204ENST00000548132 NCOA2Q15596 1464 aa20.17■□□□□ 0.82
GCN1-204ENST00000548132 MBD5Q9P267 1494 aa20.16■□□□□ 0.82
GCN1-204ENST00000548132 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
GCN1-204ENST00000548132 CAMSAP2Q08AD1 1489 aa20.13■□□□□ 0.81
GCN1-204ENST00000548132 MLECQ14165 292 aa20.13■□□□□ 0.81
GCN1-204ENST00000548132 CLTCQ00610 1675 aaKnown RBP20.11■□□□□ 0.81
GCN1-204ENST00000548132 STRCQ7RTU9 1775 aa20.11■□□□□ 0.81
GCN1-204ENST00000548132 LRRC9Q6ZRR7 1453 aa20.1■□□□□ 0.81
GCN1-204ENST00000548132 ARHGEF5Q12774 1597 aa20.09■□□□□ 0.81
GCN1-204ENST00000548132 MAP3K1Q13233 1512 aa20.09■□□□□ 0.81
GCN1-204ENST00000548132 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
GCN1-204ENST00000548132 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
GCN1-204ENST00000548132 ZNF644Q9H582 1327 aaPredicted RBP20.06■□□□□ 0.8
GCN1-204ENST00000548132 A2MP01023 1474 aa20.06■□□□□ 0.8
GCN1-204ENST00000548132 ZNF777Q9ULD5 760 aaPredicted RBP20.06■□□□□ 0.8
GCN1-204ENST00000548132 CCDC141Q6ZP82 1450 aa20.05■□□□□ 0.8
GCN1-204ENST00000548132 CFDP1Q9UEE9 299 aaPredicted RBP20.05■□□□□ 0.8
GCN1-204ENST00000548132 MYO3AQ8NEV4 1616 aa20.05■□□□□ 0.8
GCN1-204ENST00000548132 HNRNPMP52272 730 aaKnown RBP eCLIP20.04■□□□□ 0.8
GCN1-204ENST00000548132 CROCC2H7BZ55 1655 aa20.03■□□□□ 0.8
GCN1-204ENST00000548132 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
GCN1-204ENST00000548132 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.8
GCN1-204ENST00000548132 MAST1Q9Y2H9 1570 aa20.02■□□□□ 0.8
GCN1-204ENST00000548132 HSPA2P54652 639 aa20.01■□□□□ 0.79
GCN1-204ENST00000548132 CEBPAP49715 358 aaPredicted RBP20■□□□□ 0.79
GCN1-204ENST00000548132 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
GCN1-204ENST00000548132 CNTLNQ9NXG0 1405 aa20■□□□□ 0.79
GCN1-204ENST00000548132 RTEL1-TNFRSF6BF6WH68 1400 aa19.99■□□□□ 0.79
GCN1-204ENST00000548132 ILDR1Q86SU0 546 aaPredicted RBP19.98■□□□□ 0.79
GCN1-204ENST00000548132 RNF17Q9BXT8 1623 aaKnown RBP19.98■□□□□ 0.79
GCN1-204ENST00000548132 UHRF1BP1Q6BDS2 1440 aa19.97■□□□□ 0.79
GCN1-204ENST00000548132 MYT1LQ9UL68 1186 aa19.96■□□□□ 0.79
GCN1-204ENST00000548132 MROH1Q8NDA8 1641 aa19.95■□□□□ 0.78
GCN1-204ENST00000548132 FAM135AQ9P2D6 1515 aa19.94■□□□□ 0.78
GCN1-204ENST00000548132 NPATQ14207 1427 aa19.93■□□□□ 0.78
GCN1-204ENST00000548132 MYOM3Q5VTT5 1437 aa19.93■□□□□ 0.78
GCN1-204ENST00000548132 EIF2AK4Q9P2K8 1649 aaKnown RBP19.93■□□□□ 0.78
GCN1-204ENST00000548132 CEP170BQ9Y4F5 1589 aaPredicted RBP19.91■□□□□ 0.78
GCN1-204ENST00000548132 KANK4Q5T7N3 995 aaPredicted RBP19.91■□□□□ 0.78
GCN1-204ENST00000548132 PTPRKQ15262 1439 aa19.91■□□□□ 0.78
GCN1-204ENST00000548132 KDM5DQ9BY66 1539 aa19.91■□□□□ 0.78
GCN1-204ENST00000548132 PTPN23Q9H3S7 1636 aa19.9■□□□□ 0.78
GCN1-204ENST00000548132 ZC3H13Q5T200 1668 aaKnown RBP19.89■□□□□ 0.77
GCN1-204ENST00000548132 DNMT1P26358 1616 aaKnown RBP19.88■□□□□ 0.77
GCN1-204ENST00000548132 MIA2Q96PC5 1412 aa19.88■□□□□ 0.77
GCN1-204ENST00000548132 NCOA1Q15788 1441 aa19.87■□□□□ 0.77
GCN1-204ENST00000548132 DHX29Q7Z478 1369 aaKnown RBP19.87■□□□□ 0.77
GCN1-204ENST00000548132 CEP152O94986 1710 aa19.87■□□□□ 0.77
GCN1-204ENST00000548132 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
GCN1-204ENST00000548132 ZMYM3Q14202 1370 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms