RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 ZCCHC11Q5TAX3 1644 aaKnown RBP12.38□□□□□ -0.43
CCDC65-203ENST00000547861 EPRSP07814 1512 aaKnown RBP12.38□□□□□ -0.43
CCDC65-203ENST00000547861 MAP3K4Q9Y6R4 1608 aa12.34□□□□□ -0.43
CCDC65-203ENST00000547861 CASKIN1Q8WXD9 1431 aa12.33□□□□□ -0.44
CCDC65-203ENST00000547861 COL17A1Q9UMD9 1497 aaPredicted RBP12.32□□□□□ -0.44
CCDC65-203ENST00000547861 KANK4Q5T7N3 995 aaPredicted RBP12.32□□□□□ -0.44
CCDC65-203ENST00000547861 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
CCDC65-203ENST00000547861 WDR7Q9Y4E6 1490 aa12.32□□□□□ -0.44
CCDC65-203ENST00000547861 ZEB1P37275 1124 aaPredicted RBP12.31□□□□□ -0.44
CCDC65-203ENST00000547861 FMN1Q68DA7 1419 aa12.31□□□□□ -0.44
CCDC65-203ENST00000547861 RRBP1Q9P2E9 1410 aaKnown RBP12.31□□□□□ -0.44
CCDC65-203ENST00000547861 TEX14Q8IWB6 1497 aa12.31□□□□□ -0.44
CCDC65-203ENST00000547861 ABCA8O94911 1581 aa12.3□□□□□ -0.44
CCDC65-203ENST00000547861 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
CCDC65-203ENST00000547861 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
CCDC65-203ENST00000547861 P3H3Q8IVL6 736 aa12.29□□□□□ -0.44
CCDC65-203ENST00000547861 HECW1Q76N89 1606 aa12.28□□□□□ -0.44
CCDC65-203ENST00000547861 ARID3CA6NKF2 412 aa12.26□□□□□ -0.45
CCDC65-203ENST00000547861 CD109Q6YHK3 1445 aa12.26□□□□□ -0.45
CCDC65-203ENST00000547861 ADGRL1O94910 1474 aa12.26□□□□□ -0.45
CCDC65-203ENST00000547861 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
CCDC65-203ENST00000547861 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
CCDC65-203ENST00000547861 SUPT6HQ7KZ85 1726 aaKnown RBP12.24□□□□□ -0.45
CCDC65-203ENST00000547861 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
CCDC65-203ENST00000547861 EHBP1L1Q8N3D4 1523 aa12.22□□□□□ -0.45
CCDC65-203ENST00000547861 CCER1Q8TC90 406 aaPredicted RBP12.22□□□□□ -0.45
CCDC65-203ENST00000547861 CCNB3Q8WWL7 1395 aa12.21□□□□□ -0.45
CCDC65-203ENST00000547861 ATF5Q9Y2D1 282 aaPredicted RBP12.21□□□□□ -0.45
CCDC65-203ENST00000547861 ATP10BO94823 1461 aa12.21□□□□□ -0.45
CCDC65-203ENST00000547861 CCDC18Q5T9S5 1454 aa12.21□□□□□ -0.45
CCDC65-203ENST00000547861 RAPGEF6Q8TEU7 1601 aa12.2□□□□□ -0.46
CCDC65-203ENST00000547861 PHLDB1Q86UU1 1377 aa12.2□□□□□ -0.46
CCDC65-203ENST00000547861 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
CCDC65-203ENST00000547861 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
CCDC65-203ENST00000547861 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
CCDC65-203ENST00000547861 ATP1B4Q9UN42 357 aaPredicted RBP12.16□□□□□ -0.46
CCDC65-203ENST00000547861 ABCA9Q8IUA7 1624 aa12.14□□□□□ -0.47
CCDC65-203ENST00000547861 ARAP3Q8WWN8 1544 aa12.14□□□□□ -0.47
CCDC65-203ENST00000547861 NCOA2Q15596 1464 aa12.13□□□□□ -0.47
CCDC65-203ENST00000547861 MTUS2Q5JR59 1369 aa12.13□□□□□ -0.47
CCDC65-203ENST00000547861 NUP153P49790 1475 aaKnown RBP12.13□□□□□ -0.47
CCDC65-203ENST00000547861 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
CCDC65-203ENST00000547861 FGD6Q6ZV73 1430 aa12.11□□□□□ -0.47
CCDC65-203ENST00000547861 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
CCDC65-203ENST00000547861 HECW2Q9P2P5 1572 aa12.1□□□□□ -0.47
CCDC65-203ENST00000547861 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
CCDC65-203ENST00000547861 NEO1Q92859 1461 aa12.09□□□□□ -0.47
CCDC65-203ENST00000547861 PLEKHD1A6NEE1 506 aa12.08□□□□□ -0.47
CCDC65-203ENST00000547861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC65-203ENST00000547861 MYOM3Q5VTT5 1437 aa12.08□□□□□ -0.48
CCDC65-203ENST00000547861 DHX57Q6P158 1386 aaKnown RBP12.06□□□□□ -0.48
CCDC65-203ENST00000547861 GCC2Q8IWJ2 1684 aa12.06□□□□□ -0.48
CCDC65-203ENST00000547861 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
CCDC65-203ENST00000547861 ILDR1Q86SU0 546 aaPredicted RBP12.06□□□□□ -0.48
CCDC65-203ENST00000547861 TCOF1Q13428 1488 aaKnown RBP12.04□□□□□ -0.48
CCDC65-203ENST00000547861 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
CCDC65-203ENST00000547861 FRMPD1Q5SYB0 1578 aa12.04□□□□□ -0.48
CCDC65-203ENST00000547861 ITGAEP38570 1179 aa12.03□□□□□ -0.48
CCDC65-203ENST00000547861 MYT1Q01538 1121 aa12.03□□□□□ -0.48
CCDC65-203ENST00000547861 KIF14Q15058 1648 aa12.03□□□□□ -0.48
CCDC65-203ENST00000547861 ARID4BQ4LE39 1312 aaPredicted RBP12.03□□□□□ -0.48
CCDC65-203ENST00000547861 FAM50AQ14320 339 aaKnown RBP12.03□□□□□ -0.48
CCDC65-203ENST00000547861 RAB3GAP2Q9H2M9 1393 aa12.02□□□□□ -0.48
CCDC65-203ENST00000547861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC65-203ENST00000547861 ADAMTSL3P82987 1691 aa12.02□□□□□ -0.49
CCDC65-203ENST00000547861 AKNAQ7Z591 1439 aa12.02□□□□□ -0.49
CCDC65-203ENST00000547861 SETD5Q9C0A6 1442 aa12.02□□□□□ -0.49
CCDC65-203ENST00000547861 DENND4BO75064 1496 aaPredicted RBP12.01□□□□□ -0.49
CCDC65-203ENST00000547861 TTC37Q6PGP7 1564 aa12.01□□□□□ -0.49
CCDC65-203ENST00000547861 CDC42BPAQ5VT25 1732 aa12.01□□□□□ -0.49
CCDC65-203ENST00000547861 FANCAO15360 1455 aa12.01□□□□□ -0.49
CCDC65-203ENST00000547861 PTPRMP28827 1452 aa12.01□□□□□ -0.49
CCDC65-203ENST00000547861 RICTORQ6R327 1708 aa12□□□□□ -0.49
CCDC65-203ENST00000547861 CROCC2H7BZ55 1655 aa12□□□□□ -0.49
CCDC65-203ENST00000547861 BCORL1Q5H9F3 1711 aa11.99□□□□□ -0.49
CCDC65-203ENST00000547861 CLSPNQ9HAW4 1339 aa11.99□□□□□ -0.49
CCDC65-203ENST00000547861 CFAP74Q9C0B2 1584 aa11.99□□□□□ -0.49
CCDC65-203ENST00000547861 DNMT1P26358 1616 aaKnown RBP11.99□□□□□ -0.49
CCDC65-203ENST00000547861 ADGBQ8N7X0 1667 aa11.98□□□□□ -0.49
CCDC65-203ENST00000547861 PTPRKQ15262 1439 aa11.98□□□□□ -0.49
CCDC65-203ENST00000547861 ARHGEF40Q8TER5 1519 aa11.98□□□□□ -0.49
CCDC65-203ENST00000547861 MADDQ8WXG6 1647 aa11.98□□□□□ -0.49
CCDC65-203ENST00000547861 ZBTB22O15209 634 aa11.97□□□□□ -0.49
CCDC65-203ENST00000547861 TROQ12816 1431 aaPredicted RBP11.97□□□□□ -0.49
CCDC65-203ENST00000547861 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
CCDC65-203ENST00000547861 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
CCDC65-203ENST00000547861 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
CCDC65-203ENST00000547861 HFM1A2PYH4 1435 aa11.95□□□□□ -0.5
CCDC65-203ENST00000547861 PLCH2O75038 1416 aa11.94□□□□□ -0.5
CCDC65-203ENST00000547861 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
CCDC65-203ENST00000547861 ZMYM4Q5VZL5 1548 aa11.94□□□□□ -0.5
CCDC65-203ENST00000547861 SCAPERQ9BY12 1400 aa11.94□□□□□ -0.5
CCDC65-203ENST00000547861 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
CCDC65-203ENST00000547861 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
CCDC65-203ENST00000547861 ZFYVE16Q7Z3T8 1539 aa11.93□□□□□ -0.5
CCDC65-203ENST00000547861 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
CCDC65-203ENST00000547861 SIGLEC1Q9BZZ2 1709 aa11.92□□□□□ -0.5
CCDC65-203ENST00000547861 MLECQ14165 292 aa11.91□□□□□ -0.5
CCDC65-203ENST00000547861 EFCAB2Q5VUJ9 269 aa11.91□□□□□ -0.5
CCDC65-203ENST00000547861 NAIPQ13075 1403 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms