RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 RNF25Q96BH1 459 aaPredicted RBP8.51□□□□□ -1.05
DEPDC4-204ENST00000547823 ZNF687Q8N1G0 1237 aa8.49□□□□□ -1.05
DEPDC4-204ENST00000547823 MS4A4AQ96JQ5 239 aa8.49□□□□□ -1.05
DEPDC4-204ENST00000547823 PHF8Q9UPP1 1060 aa8.49□□□□□ -1.05
DEPDC4-204ENST00000547823 GPR153Q6NV75 609 aa8.47□□□□□ -1.05
DEPDC4-204ENST00000547823 TMEM92Q6UXU6 159 aa8.47□□□□□ -1.05
DEPDC4-204ENST00000547823 RNF166Q96A37 237 aaPredicted RBP8.47□□□□□ -1.05
DEPDC4-204ENST00000547823 BCL11BQ9C0K0 894 aaPredicted RBP8.44□□□□□ -1.06
DEPDC4-204ENST00000547823 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
DEPDC4-204ENST00000547823 FBXO22Q8NEZ5 403 aa8.43□□□□□ -1.06
DEPDC4-204ENST00000547823 STK24Q9Y6E0 443 aa8.42□□□□□ -1.06
DEPDC4-204ENST00000547823 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
DEPDC4-204ENST00000547823 STK25O00506 426 aa8.39□□□□□ -1.07
DEPDC4-204ENST00000547823 PBX2P40425 430 aa8.39□□□□□ -1.07
DEPDC4-204ENST00000547823 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
DEPDC4-204ENST00000547823 ECM2O94769 699 aaPredicted RBP8.37□□□□□ -1.07
DEPDC4-204ENST00000547823 MFRPQ9BY79 579 aa8.37□□□□□ -1.07
DEPDC4-204ENST00000547823 KIF3CO14782 793 aa8.36□□□□□ -1.07
DEPDC4-204ENST00000547823 SLC34A2O95436 690 aa8.36□□□□□ -1.07
DEPDC4-204ENST00000547823 LSM11P83369 360 aaKnown RBP eCLIP8.34□□□□□ -1.07
DEPDC4-204ENST00000547823 TMC2Q8TDI7 906 aa8.34□□□□□ -1.07
DEPDC4-204ENST00000547823 PSDA5PKW4 1024 aaPredicted RBP8.33□□□□□ -1.08
DEPDC4-204ENST00000547823 C2orf72A6NCS6 295 aa8.33□□□□□ -1.08
DEPDC4-204ENST00000547823 ANKRD13DQ6ZTN6 518 aa8.32□□□□□ -1.08
DEPDC4-204ENST00000547823 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
DEPDC4-204ENST00000547823 NUDT7P0C024 238 aa8.28□□□□□ -1.08
DEPDC4-204ENST00000547823 KHSRPQ92945 711 aaKnown RBP eCLIP8.27□□□□□ -1.09
DEPDC4-204ENST00000547823 LHX6Q9UPM6 363 aa8.25□□□□□ -1.09
DEPDC4-204ENST00000547823 RGL2O15211 777 aa8.24□□□□□ -1.09
DEPDC4-204ENST00000547823 PKD2Q13563 968 aa8.23□□□□□ -1.09
DEPDC4-204ENST00000547823 ARHGAP33O14559 1287 aa8.22□□□□□ -1.09
DEPDC4-204ENST00000547823 HCSTQ9UBK5 93 aa8.22□□□□□ -1.09
DEPDC4-204ENST00000547823 TK2O00142 265 aa8.21□□□□□ -1.1
DEPDC4-204ENST00000547823 PTCD2Q8WV60 388 aaKnown RBP8.21□□□□□ -1.1
DEPDC4-204ENST00000547823 TBC1D12O60347 775 aa8.2□□□□□ -1.1
DEPDC4-204ENST00000547823 FOXK1P85037 733 aa8.19□□□□□ -1.1
DEPDC4-204ENST00000547823 ADGRD1Q6QNK2 874 aa8.19□□□□□ -1.1
DEPDC4-204ENST00000547823 KCNH8Q96L42 1107 aa8.19□□□□□ -1.1
DEPDC4-204ENST00000547823 RYDENQ9NUL5 291 aaKnown RBP8.19□□□□□ -1.1
DEPDC4-204ENST00000547823 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
DEPDC4-204ENST00000547823 HS6ST3Q8IZP7 471 aa8.17□□□□□ -1.1
DEPDC4-204ENST00000547823 GPHNQ9NQX3 736 aaPredicted RBP8.17□□□□□ -1.1
DEPDC4-204ENST00000547823 POTEEQ6S8J3 1075 aa8.16□□□□□ -1.1
DEPDC4-204ENST00000547823 AXIN2Q9Y2T1 843 aa8.16□□□□□ -1.1
DEPDC4-204ENST00000547823 KDM4FA0A1W2PPD8 638 aa8.15□□□□□ -1.1
DEPDC4-204ENST00000547823 PPP1R37O75864 691 aa8.15□□□□□ -1.1
DEPDC4-204ENST00000547823 PLPP6Q8IY26 295 aa8.14□□□□□ -1.11
DEPDC4-204ENST00000547823 PLA2G2EQ9NZK7 142 aa8.14□□□□□ -1.11
DEPDC4-204ENST00000547823 STAC3Q96MF2 364 aa8.13□□□□□ -1.11
DEPDC4-204ENST00000547823 HRO43593 1189 aa8.1□□□□□ -1.11
DEPDC4-204ENST00000547823 DNAJC5Q9H3Z4 198 aa8.1□□□□□ -1.11
DEPDC4-204ENST00000547823 DSG2Q14126 1118 aa8.08□□□□□ -1.12
DEPDC4-204ENST00000547823 PSEN2P49810 448 aa8.06□□□□□ -1.12
DEPDC4-204ENST00000547823 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
DEPDC4-204ENST00000547823 OXER1Q8TDS5 423 aa8.05□□□□□ -1.12
DEPDC4-204ENST00000547823 KCNK17Q96T54 332 aa8.05□□□□□ -1.12
DEPDC4-204ENST00000547823 SLC4A5Q9BY07 1137 aa8.05□□□□□ -1.12
DEPDC4-204ENST00000547823 CHGAP10645 457 aaKnown RBP8.04□□□□□ -1.12
DEPDC4-204ENST00000547823 KCTD12Q96CX2 325 aaKnown RBP8.03□□□□□ -1.12
DEPDC4-204ENST00000547823 BCL2L12Q9HB09 334 aa8.03□□□□□ -1.12
DEPDC4-204ENST00000547823 CRISPLD2Q9H0B8 497 aa8.02□□□□□ -1.13
DEPDC4-204ENST00000547823 RGS20O76081 388 aa8.01□□□□□ -1.13
DEPDC4-204ENST00000547823 PPP1R15BQ5SWA1 713 aa8.01□□□□□ -1.13
DEPDC4-204ENST00000547823 ZNF454Q8N9F8 522 aa8.01□□□□□ -1.13
DEPDC4-204ENST00000547823 VPS9D1Q9Y2B5 631 aa8.01□□□□□ -1.13
DEPDC4-204ENST00000547823 PTPREP23469 700 aa8□□□□□ -1.13
DEPDC4-204ENST00000547823 PDE4AP27815 886 aa8□□□□□ -1.13
DEPDC4-204ENST00000547823 IFFO2Q5TF58 517 aa8□□□□□ -1.13
DEPDC4-204ENST00000547823 JPH4Q96JJ6 628 aa7.99□□□□□ -1.13
DEPDC4-204ENST00000547823 FOSBP53539 338 aa7.98□□□□□ -1.13
DEPDC4-204ENST00000547823 UPF1Q92900 1129 aaKnown RBP eCLIP7.98□□□□□ -1.13
DEPDC4-204ENST00000547823 NBPF3Q9H094 633 aa7.97□□□□□ -1.13
DEPDC4-204ENST00000547823 GOLGA8CPA6NN73 597 aa7.96□□□□□ -1.14
DEPDC4-204ENST00000547823 NKX1-1Q15270 411 aaPredicted RBP7.95□□□□□ -1.14
DEPDC4-204ENST00000547823 ANO8Q9HCE9 1232 aaPredicted RBP7.95□□□□□ -1.14
DEPDC4-204ENST00000547823 MRPL50Q8N5N7 158 aaKnown RBP7.94□□□□□ -1.14
DEPDC4-204ENST00000547823 ZDHHC16Q969W1 377 aa7.94□□□□□ -1.14
DEPDC4-204ENST00000547823 BHMG1C9JSJ3 638 aaPredicted RBP7.93□□□□□ -1.14
DEPDC4-204ENST00000547823 THSD4Q6ZMP0 1018 aa7.93□□□□□ -1.14
DEPDC4-204ENST00000547823 ZBED2Q9BTP6 218 aa7.93□□□□□ -1.14
DEPDC4-204ENST00000547823 EVI5O60447 810 aa7.92□□□□□ -1.14
DEPDC4-204ENST00000547823 PTPN5P54829 565 aa7.92□□□□□ -1.14
DEPDC4-204ENST00000547823 DDX27Q96GQ7 796 aaKnown RBP7.92□□□□□ -1.14
DEPDC4-204ENST00000547823 WNT2BQ93097 391 aa7.91□□□□□ -1.14
DEPDC4-204ENST00000547823 NCKAP5LQ9HCH0 1330 aa7.91□□□□□ -1.14
DEPDC4-204ENST00000547823 PPP1R3GB7ZBB8 358 aa7.89□□□□□ -1.15
DEPDC4-204ENST00000547823 MAP3K9P80192 1104 aa7.89□□□□□ -1.15
DEPDC4-204ENST00000547823 MFSD10Q14728 455 aa7.89□□□□□ -1.15
DEPDC4-204ENST00000547823 FBXW7Q969H0 707 aa7.89□□□□□ -1.15
DEPDC4-204ENST00000547823 A0A0G2JS52 829 aa7.87□□□□□ -1.15
DEPDC4-204ENST00000547823 NYAP1Q6ZVC0 841 aa7.87□□□□□ -1.15
DEPDC4-204ENST00000547823 LARP6Q9BRS8 491 aaKnown RBP7.87□□□□□ -1.15
DEPDC4-204ENST00000547823 ADAM33Q9BZ11 813 aa7.87□□□□□ -1.15
DEPDC4-204ENST00000547823 RABGEF1Q9UJ41 708 aa7.87□□□□□ -1.15
DEPDC4-204ENST00000547823 LAPTM4BQ86VI4 370 aa7.86□□□□□ -1.15
DEPDC4-204ENST00000547823 ANKK1Q8NFD2 765 aa7.86□□□□□ -1.15
DEPDC4-204ENST00000547823 GTPBP6O43824 516 aaPredicted RBP7.84□□□□□ -1.15
DEPDC4-204ENST00000547823 PHF14O94880 888 aa7.84□□□□□ -1.15
DEPDC4-204ENST00000547823 TYW1BQ6NUM6 668 aa7.84□□□□□ -1.15
DEPDC4-204ENST00000547823 ONECUT3O60422 494 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms