RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 CDC42BPBQ9Y5S2 1711 aa33.24■■■□□ 2.91
RBFOX1-210ENST00000547605 ZNF644Q9H582 1327 aaPredicted RBP33.24■■■□□ 2.91
RBFOX1-210ENST00000547605 ABCA9Q8IUA7 1624 aa33.23■■■□□ 2.91
RBFOX1-210ENST00000547605 ARHGAP5Q13017 1502 aa33.22■■■□□ 2.91
RBFOX1-210ENST00000547605 PLCH2O75038 1416 aa33.2■■■□□ 2.91
RBFOX1-210ENST00000547605 CAMSAP2Q08AD1 1489 aa33.2■■■□□ 2.9
RBFOX1-210ENST00000547605 EFCAB2Q5VUJ9 269 aa33.12■■■□□ 2.89
RBFOX1-210ENST00000547605 CD109Q6YHK3 1445 aa33.1■■■□□ 2.89
RBFOX1-210ENST00000547605 SAMD9LQ8IVG5 1584 aa33.09■■■□□ 2.89
RBFOX1-210ENST00000547605 ARAP3Q8WWN8 1544 aa33.09■■■□□ 2.89
RBFOX1-210ENST00000547605 FAM69CQ0P6D2 419 aa33.07■■■□□ 2.88
RBFOX1-210ENST00000547605 DNMT1P26358 1616 aaKnown RBP33.05■■■□□ 2.88
RBFOX1-210ENST00000547605 DAPK1P53355 1430 aa33.04■■■□□ 2.88
RBFOX1-210ENST00000547605 GLI2P10070 1586 aa33.04■■■□□ 2.88
RBFOX1-210ENST00000547605 DIP2BQ9P265 1576 aa33.04■■■□□ 2.88
RBFOX1-210ENST00000547605 HNRNPMP52272 730 aaKnown RBP eCLIP33.04■■■□□ 2.88
RBFOX1-210ENST00000547605 PTPRKQ15262 1439 aa33.04■■■□□ 2.88
RBFOX1-210ENST00000547605 FANCAO15360 1455 aa33.03■■■□□ 2.88
RBFOX1-210ENST00000547605 ABCC5O15440 1437 aa33.01■■■□□ 2.88
RBFOX1-210ENST00000547605 CHIC2Q9UKJ5 165 aa33.01■■■□□ 2.87
RBFOX1-210ENST00000547605 PLEKHH2Q8IVE3 1493 aa33.01■■■□□ 2.87
RBFOX1-210ENST00000547605 SYCP2Q9BX26 1530 aa32.98■■■□□ 2.87
RBFOX1-210ENST00000547605 MAP3K4Q9Y6R4 1608 aa32.98■■■□□ 2.87
RBFOX1-210ENST00000547605 KIAA1107Q9UPP5 1409 aa32.96■■■□□ 2.87
RBFOX1-210ENST00000547605 MBD5Q9P267 1494 aa32.95■■■□□ 2.87
RBFOX1-210ENST00000547605 ARHGEF5Q12774 1597 aa32.94■■■□□ 2.86
RBFOX1-210ENST00000547605 RSPH4AQ5TD94 716 aa32.93■■■□□ 2.86
RBFOX1-210ENST00000547605 ABCC1P33527 1531 aa32.93■■■□□ 2.86
RBFOX1-210ENST00000547605 CROCC2H7BZ55 1655 aa32.91■■■□□ 2.86
RBFOX1-210ENST00000547605 TSPY4P0CV99 314 aa32.91■■■□□ 2.86
RBFOX1-210ENST00000547605 TSPY10P0CW01 314 aa32.91■■■□□ 2.86
RBFOX1-210ENST00000547605 CFAP74Q9C0B2 1584 aa32.91■■■□□ 2.86
RBFOX1-210ENST00000547605 CCDC141Q6ZP82 1450 aa32.91■■■□□ 2.86
RBFOX1-210ENST00000547605 AKNAQ7Z591 1439 aa32.89■■■□□ 2.86
RBFOX1-210ENST00000547605 ARHGEF12Q9NZN5 1544 aa32.89■■■□□ 2.86
RBFOX1-210ENST00000547605 RRP7BPQ9NSQ0 103 aa32.88■■■□□ 2.85
RBFOX1-210ENST00000547605 KIF13AQ9H1H9 1805 aa32.88■■■□□ 2.85
RBFOX1-210ENST00000547605 ADGRL1O94910 1474 aa32.88■■■□□ 2.85
RBFOX1-210ENST00000547605 SETD5Q9C0A6 1442 aa32.87■■■□□ 2.85
RBFOX1-210ENST00000547605 TSPOAP1O95153 1857 aa32.86■■■□□ 2.85
RBFOX1-210ENST00000547605 SHANK2Q9UPX8 1470 aa32.84■■■□□ 2.85
RBFOX1-210ENST00000547605 C9orf84Q5VXU9 1444 aa32.84■■■□□ 2.85
RBFOX1-210ENST00000547605 SCAPERQ9BY12 1400 aa32.84■■■□□ 2.85
RBFOX1-210ENST00000547605 ROCK1Q13464 1354 aa32.83■■■□□ 2.85
RBFOX1-210ENST00000547605 HFM1A2PYH4 1435 aa32.83■■■□□ 2.85
RBFOX1-210ENST00000547605 NEO1Q92859 1461 aa32.82■■■□□ 2.84
RBFOX1-210ENST00000547605 ADGBQ8N7X0 1667 aa32.82■■■□□ 2.84
RBFOX1-210ENST00000547605 TRAPPC8Q9Y2L5 1435 aa32.81■■■□□ 2.84
RBFOX1-210ENST00000547605 RAB3GAP2Q9H2M9 1393 aa32.81■■■□□ 2.84
RBFOX1-210ENST00000547605 ANKRD30AQ9BXX3 1397 aa32.79■■■□□ 2.84
RBFOX1-210ENST00000547605 NAIPQ13075 1403 aa32.79■■■□□ 2.84
RBFOX1-210ENST00000547605 AFAP1Q8N556 730 aa32.77■■■□□ 2.84
RBFOX1-210ENST00000547605 ADGRL2O95490 1459 aa32.76■■■□□ 2.84
RBFOX1-210ENST00000547605 NCOA1Q15788 1441 aa32.75■■■□□ 2.83
RBFOX1-210ENST00000547605 TEX14Q8IWB6 1497 aa32.75■■■□□ 2.83
RBFOX1-210ENST00000547605 PPRC1Q5VV67 1664 aaKnown RBP32.74■■■□□ 2.83
RBFOX1-210ENST00000547605 GCC2Q8IWJ2 1684 aa32.74■■■□□ 2.83
RBFOX1-210ENST00000547605 TRHP20396 242 aaPredicted RBP32.73■■■□□ 2.83
RBFOX1-210ENST00000547605 MAST1Q9Y2H9 1570 aa32.72■■■□□ 2.83
RBFOX1-210ENST00000547605 SPAG9O60271 1321 aaKnown RBP32.71■■■□□ 2.83
RBFOX1-210ENST00000547605 MYT1LQ9UL68 1186 aa32.68■■■□□ 2.82
RBFOX1-210ENST00000547605 ZNF518AQ6AHZ1 1483 aa32.68■■■□□ 2.82
RBFOX1-210ENST00000547605 CCER1Q8TC90 406 aaPredicted RBP32.67■■■□□ 2.82
RBFOX1-210ENST00000547605 HRCP23327 699 aa32.66■■■□□ 2.82
RBFOX1-210ENST00000547605 DENND4BO75064 1496 aaPredicted RBP32.66■■■□□ 2.82
RBFOX1-210ENST00000547605 POGZQ7Z3K3 1410 aa32.65■■■□□ 2.82
RBFOX1-210ENST00000547605 KIF15Q9NS87 1388 aa32.64■■■□□ 2.82
RBFOX1-210ENST00000547605 RAPGEF3O95398 923 aa32.62■■■□□ 2.81
RBFOX1-210ENST00000547605 RTEL1-TNFRSF6BF6WH68 1400 aa32.62■■■□□ 2.81
RBFOX1-210ENST00000547605 KDM6BO15054 1643 aa32.6■■■□□ 2.81
RBFOX1-210ENST00000547605 PLXNC1O60486 1568 aa32.6■■■□□ 2.81
RBFOX1-210ENST00000547605 ZFYVE16Q7Z3T8 1539 aa32.59■■■□□ 2.81
RBFOX1-210ENST00000547605 ATP7AQ04656 1500 aa32.58■■■□□ 2.81
RBFOX1-210ENST00000547605 ANKRD50Q9ULJ7 1429 aa32.58■■■□□ 2.81
RBFOX1-210ENST00000547605 KDM5CP41229 1560 aa32.56■■■□□ 2.8
RBFOX1-210ENST00000547605 INO80Q9ULG1 1556 aaPredicted RBP32.56■■■□□ 2.8
RBFOX1-210ENST00000547605 RICTORQ6R327 1708 aa32.54■■■□□ 2.8
RBFOX1-210ENST00000547605 TRIM52Q96A61 297 aa32.54■■■□□ 2.8
RBFOX1-210ENST00000547605 DHX57Q6P158 1386 aaKnown RBP32.51■■■□□ 2.79
RBFOX1-210ENST00000547605 DUOX2Q9NRD8 1548 aa32.51■■■□□ 2.79
RBFOX1-210ENST00000547605 KIDINS220Q9ULH0 1771 aa32.5■■■□□ 2.79
RBFOX1-210ENST00000547605 HECW2Q9P2P5 1572 aa32.5■■■□□ 2.79
RBFOX1-210ENST00000547605 MLH3Q9UHC1 1453 aa32.49■■■□□ 2.79
RBFOX1-210ENST00000547605 ACIN1Q9UKV3 1341 aaKnown RBP32.48■■■□□ 2.79
RBFOX1-210ENST00000547605 FRMPD1Q5SYB0 1578 aa32.46■■■□□ 2.79
RBFOX1-210ENST00000547605 ERBINQ96RT1 1412 aa32.42■■■□□ 2.78
RBFOX1-210ENST00000547605 COL17A1Q9UMD9 1497 aaPredicted RBP32.4■■■□□ 2.78
RBFOX1-210ENST00000547605 ZMYM4Q5VZL5 1548 aa32.38■■■□□ 2.77
RBFOX1-210ENST00000547605 DHX29Q7Z478 1369 aaKnown RBP32.37■■■□□ 2.77
RBFOX1-210ENST00000547605 ABCA6Q8N139 1617 aa32.36■■■□□ 2.77
RBFOX1-210ENST00000547605 A2MP01023 1474 aa32.34■■■□□ 2.77
RBFOX1-210ENST00000547605 YEATS2Q9ULM3 1422 aa32.32■■■□□ 2.76
RBFOX1-210ENST00000547605 MAGI2Q86UL8 1455 aa32.32■■■□□ 2.76
RBFOX1-210ENST00000547605 NUP155O75694 1391 aa32.32■■■□□ 2.76
RBFOX1-210ENST00000547605 MPHOSPH9Q99550 1183 aa32.31■■■□□ 2.76
RBFOX1-210ENST00000547605 DIP2CQ9Y2E4 1556 aa32.31■■■□□ 2.76
RBFOX1-210ENST00000547605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.3■■■□□ 2.76
RBFOX1-210ENST00000547605 SLC4A1APQ9BWU0 796 aaKnown RBP32.29■■■□□ 2.76
RBFOX1-210ENST00000547605 KIF3BO15066 747 aa32.28■■■□□ 2.76
RBFOX1-210ENST00000547605 CLSPNQ9HAW4 1339 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms