RNA–Protein interactions for RNA: ENST00000547591.5

RAB3IP-210, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-210ENST00000547591 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
RAB3IP-210ENST00000547591 C2orf72A6NCS6 295 aa11.84□□□□□ -0.51
RAB3IP-210ENST00000547591 KIF3CO14782 793 aa11.84□□□□□ -0.51
RAB3IP-210ENST00000547591 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
RAB3IP-210ENST00000547591 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
RAB3IP-210ENST00000547591 PDE4AP27815 886 aa11.79□□□□□ -0.52
RAB3IP-210ENST00000547591 CRISPLD2Q9H0B8 497 aa11.79□□□□□ -0.52
RAB3IP-210ENST00000547591 RIMBP2O15034 1052 aa11.78□□□□□ -0.52
RAB3IP-210ENST00000547591 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
RAB3IP-210ENST00000547591 FOXK1P85037 733 aa11.76□□□□□ -0.53
RAB3IP-210ENST00000547591 HOXB3P14651 431 aaPredicted RBP11.75□□□□□ -0.53
RAB3IP-210ENST00000547591 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
RAB3IP-210ENST00000547591 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
RAB3IP-210ENST00000547591 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
RAB3IP-210ENST00000547591 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
RAB3IP-210ENST00000547591 ST18O60284 1047 aa11.71□□□□□ -0.53
RAB3IP-210ENST00000547591 DSG2Q14126 1118 aa11.71□□□□□ -0.53
RAB3IP-210ENST00000547591 PPP1R15BQ5SWA1 713 aa11.71□□□□□ -0.53
RAB3IP-210ENST00000547591 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.53
RAB3IP-210ENST00000547591 PLPP6Q8IY26 295 aa11.71□□□□□ -0.53
RAB3IP-210ENST00000547591 DDX27Q96GQ7 796 aaKnown RBP11.71□□□□□ -0.53
RAB3IP-210ENST00000547591 MFSD10Q14728 455 aa11.7□□□□□ -0.54
RAB3IP-210ENST00000547591 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
RAB3IP-210ENST00000547591 SLC34A2O95436 690 aa11.69□□□□□ -0.54
RAB3IP-210ENST00000547591 LCE2DQ5TA82 110 aaPredicted RBP11.68□□□□□ -0.54
RAB3IP-210ENST00000547591 HOXB1P14653 301 aaPredicted RBP11.65□□□□□ -0.54
RAB3IP-210ENST00000547591 EMP3P54852 163 aa11.61□□□□□ -0.55
RAB3IP-210ENST00000547591 GPR153Q6NV75 609 aa11.61□□□□□ -0.55
RAB3IP-210ENST00000547591 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
RAB3IP-210ENST00000547591 TSHZ2Q9NRE2 1034 aa11.61□□□□□ -0.55
RAB3IP-210ENST00000547591 POTEMA6NI47 508 aa11.6□□□□□ -0.55
RAB3IP-210ENST00000547591 TBC1D12O60347 775 aa11.6□□□□□ -0.55
RAB3IP-210ENST00000547591 POTEGQ6S5H5 508 aa11.6□□□□□ -0.55
RAB3IP-210ENST00000547591 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
RAB3IP-210ENST00000547591 WDR70Q9NW82 654 aa11.59□□□□□ -0.55
RAB3IP-210ENST00000547591 ARSIQ5FYB1 569 aa11.57□□□□□ -0.56
RAB3IP-210ENST00000547591 MARVELD3Q96A59 401 aa11.57□□□□□ -0.56
RAB3IP-210ENST00000547591 OXER1Q8TDS5 423 aa11.56□□□□□ -0.56
RAB3IP-210ENST00000547591 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
RAB3IP-210ENST00000547591 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
RAB3IP-210ENST00000547591 UPF1Q92900 1129 aaKnown RBP eCLIP11.54□□□□□ -0.56
RAB3IP-210ENST00000547591 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
RAB3IP-210ENST00000547591 NUDT7P0C024 238 aa11.52□□□□□ -0.57
RAB3IP-210ENST00000547591 ERBB3P21860 1342 aa11.51□□□□□ -0.57
RAB3IP-210ENST00000547591 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
RAB3IP-210ENST00000547591 E2F4Q16254 413 aa11.5□□□□□ -0.57
RAB3IP-210ENST00000547591 KHSRPQ92945 711 aaKnown RBP eCLIP11.5□□□□□ -0.57
RAB3IP-210ENST00000547591 MAP3K9P80192 1104 aa11.49□□□□□ -0.57
RAB3IP-210ENST00000547591 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-210ENST00000547591 HS3ST6Q96QI5 342 aa11.48□□□□□ -0.57
RAB3IP-210ENST00000547591 EMILIN3Q9NT22 766 aa11.48□□□□□ -0.57
RAB3IP-210ENST00000547591 PCDH10Q9P2E7 1040 aa11.47□□□□□ -0.57
RAB3IP-210ENST00000547591 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
RAB3IP-210ENST00000547591 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
RAB3IP-210ENST00000547591 LHX6Q9UPM6 363 aa11.43□□□□□ -0.58
RAB3IP-210ENST00000547591 DPYSL4O14531 572 aa11.42□□□□□ -0.58
RAB3IP-210ENST00000547591 EVI5O60447 810 aa11.42□□□□□ -0.58
RAB3IP-210ENST00000547591 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
RAB3IP-210ENST00000547591 ARIH1Q9Y4X5 557 aaPredicted RBP11.42□□□□□ -0.58
RAB3IP-210ENST00000547591 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
RAB3IP-210ENST00000547591 VSIG10Q8N0Z9 540 aa11.39□□□□□ -0.59
RAB3IP-210ENST00000547591 ANO8Q9HCE9 1232 aaPredicted RBP11.39□□□□□ -0.59
RAB3IP-210ENST00000547591 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
RAB3IP-210ENST00000547591 ZNF687Q8N1G0 1237 aa11.38□□□□□ -0.59
RAB3IP-210ENST00000547591 POTEB3A0JP26 581 aa11.37□□□□□ -0.59
RAB3IP-210ENST00000547591 PDIA6Q15084 440 aa11.37□□□□□ -0.59
RAB3IP-210ENST00000547591 PPP4R3BQ5MIZ7 849 aa11.37□□□□□ -0.59
RAB3IP-210ENST00000547591 POTEBQ6S5H4 581 aa11.37□□□□□ -0.59
RAB3IP-210ENST00000547591 JPH4Q96JJ6 628 aa11.36□□□□□ -0.59
RAB3IP-210ENST00000547591 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
RAB3IP-210ENST00000547591 PBX2P40425 430 aa11.34□□□□□ -0.59
RAB3IP-210ENST00000547591 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
RAB3IP-210ENST00000547591 ZNF454Q8N9F8 522 aa11.33□□□□□ -0.6
RAB3IP-210ENST00000547591 FOSBP53539 338 aa11.32□□□□□ -0.6
RAB3IP-210ENST00000547591 KDM2AQ9Y2K7 1162 aa11.3□□□□□ -0.6
RAB3IP-210ENST00000547591 PHF14O94880 888 aa11.29□□□□□ -0.6
RAB3IP-210ENST00000547591 PTGER2P43116 358 aa11.29□□□□□ -0.6
RAB3IP-210ENST00000547591 KCNH8Q96L42 1107 aa11.29□□□□□ -0.6
RAB3IP-210ENST00000547591 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
RAB3IP-210ENST00000547591 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.61
RAB3IP-210ENST00000547591 EPAS1Q99814 870 aa11.27□□□□□ -0.61
RAB3IP-210ENST00000547591 TYW1BQ6NUM6 668 aa11.26□□□□□ -0.61
RAB3IP-210ENST00000547591 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
RAB3IP-210ENST00000547591 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
RAB3IP-210ENST00000547591 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
RAB3IP-210ENST00000547591 ARHGAP33O14559 1287 aa11.24□□□□□ -0.61
RAB3IP-210ENST00000547591 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
RAB3IP-210ENST00000547591 DDX12PQ92771 950 aa11.23□□□□□ -0.61
RAB3IP-210ENST00000547591 PTPREP23469 700 aa11.22□□□□□ -0.61
RAB3IP-210ENST00000547591 LSM11P83369 360 aaKnown RBP eCLIP11.2□□□□□ -0.62
RAB3IP-210ENST00000547591 NBR1Q14596 966 aa11.2□□□□□ -0.62
RAB3IP-210ENST00000547591 POTEEQ6S8J3 1075 aa11.19□□□□□ -0.62
RAB3IP-210ENST00000547591 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
RAB3IP-210ENST00000547591 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
RAB3IP-210ENST00000547591 AXIN2Q9Y2T1 843 aa11.18□□□□□ -0.62
RAB3IP-210ENST00000547591 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
RAB3IP-210ENST00000547591 PSEN2P49810 448 aa11.16□□□□□ -0.62
RAB3IP-210ENST00000547591 EN1Q05925 392 aaPredicted RBP11.16□□□□□ -0.62
RAB3IP-210ENST00000547591 PPP1R3GB7ZBB8 358 aa11.14□□□□□ -0.63
RAB3IP-210ENST00000547591 TK2O00142 265 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms