RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.35
LINC00661-202ENST00000547102 ZFYVE16Q7Z3T8 1539 aa17.21■□□□□ 0.34
LINC00661-202ENST00000547102 CEP162Q5TB80 1403 aa17.21■□□□□ 0.34
LINC00661-202ENST00000547102 ARID4BQ4LE39 1312 aaPredicted RBP17.2■□□□□ 0.34
LINC00661-202ENST00000547102 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
LINC00661-202ENST00000547102 PREX2Q70Z35 1606 aa17.18■□□□□ 0.34
LINC00661-202ENST00000547102 BCORL1Q5H9F3 1711 aa17.16■□□□□ 0.34
LINC00661-202ENST00000547102 CDC42BPBQ9Y5S2 1711 aa17.16■□□□□ 0.34
LINC00661-202ENST00000547102 ZNF518AQ6AHZ1 1483 aa17.15■□□□□ 0.34
LINC00661-202ENST00000547102 ADAMTSL3P82987 1691 aa17.14■□□□□ 0.33
LINC00661-202ENST00000547102 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
LINC00661-202ENST00000547102 CDC42BPAQ5VT25 1732 aa17.13■□□□□ 0.33
LINC00661-202ENST00000547102 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
LINC00661-202ENST00000547102 ABCC1P33527 1531 aa17.11■□□□□ 0.33
LINC00661-202ENST00000547102 KDM5CP41229 1560 aa17.11■□□□□ 0.33
LINC00661-202ENST00000547102 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
LINC00661-202ENST00000547102 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
LINC00661-202ENST00000547102 C9orf84Q5VXU9 1444 aa17.09■□□□□ 0.33
LINC00661-202ENST00000547102 PTPRMP28827 1452 aa17.09■□□□□ 0.33
LINC00661-202ENST00000547102 HECW2Q9P2P5 1572 aa17.09■□□□□ 0.33
LINC00661-202ENST00000547102 ITSN2Q9NZM3 1697 aa17.09■□□□□ 0.33
LINC00661-202ENST00000547102 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
LINC00661-202ENST00000547102 ATP10AO60312 1499 aa17.08■□□□□ 0.32
LINC00661-202ENST00000547102 CCNB3Q8WWL7 1395 aa17.06■□□□□ 0.32
LINC00661-202ENST00000547102 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
LINC00661-202ENST00000547102 RIMS1Q86UR5 1692 aaKnown RBP17.06■□□□□ 0.32
LINC00661-202ENST00000547102 GPATCH8Q9UKJ3 1502 aaKnown RBP17.06■□□□□ 0.32
LINC00661-202ENST00000547102 SIGLEC1Q9BZZ2 1709 aa17.05■□□□□ 0.32
LINC00661-202ENST00000547102 LOC105371045A0A1W2PR82 267 aa17.05■□□□□ 0.32
LINC00661-202ENST00000547102 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
LINC00661-202ENST00000547102 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
LINC00661-202ENST00000547102 ARHGEF12Q9NZN5 1544 aa17.03■□□□□ 0.32
LINC00661-202ENST00000547102 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
LINC00661-202ENST00000547102 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
LINC00661-202ENST00000547102 MLH3Q9UHC1 1453 aa17.03■□□□□ 0.32
LINC00661-202ENST00000547102 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
LINC00661-202ENST00000547102 DIP2CQ9Y2E4 1556 aa17.02■□□□□ 0.32
LINC00661-202ENST00000547102 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.32
LINC00661-202ENST00000547102 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.32
LINC00661-202ENST00000547102 MLECQ14165 292 aa17.02■□□□□ 0.32
LINC00661-202ENST00000547102 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.31
LINC00661-202ENST00000547102 ABCA6Q8N139 1617 aa17■□□□□ 0.31
LINC00661-202ENST00000547102 TIAM1Q13009 1591 aa17■□□□□ 0.31
LINC00661-202ENST00000547102 REREQ9P2R6 1566 aa17■□□□□ 0.31
LINC00661-202ENST00000547102 SUPT6HQ7KZ85 1726 aaKnown RBP16.99■□□□□ 0.31
LINC00661-202ENST00000547102 KIAA1107Q9UPP5 1409 aa16.98■□□□□ 0.31
LINC00661-202ENST00000547102 KIDINS220Q9ULH0 1771 aa16.97■□□□□ 0.31
LINC00661-202ENST00000547102 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
LINC00661-202ENST00000547102 SPAG9O60271 1321 aaKnown RBP16.95■□□□□ 0.3
LINC00661-202ENST00000547102 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
LINC00661-202ENST00000547102 HNRNPMP52272 730 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC00661-202ENST00000547102 AGLP35573 1532 aa16.93■□□□□ 0.3
LINC00661-202ENST00000547102 ATP7AQ04656 1500 aa16.93■□□□□ 0.3
LINC00661-202ENST00000547102 INO80Q9ULG1 1556 aaPredicted RBP16.92■□□□□ 0.3
LINC00661-202ENST00000547102 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
LINC00661-202ENST00000547102 ESF1Q9H501 851 aaKnown RBP16.9■□□□□ 0.3
LINC00661-202ENST00000547102 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
LINC00661-202ENST00000547102 LMTK3Q96Q04 1460 aa16.89■□□□□ 0.29
LINC00661-202ENST00000547102 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
LINC00661-202ENST00000547102 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
LINC00661-202ENST00000547102 APLP2Q06481 763 aa16.87■□□□□ 0.29
LINC00661-202ENST00000547102 MBD5Q9P267 1494 aa16.86■□□□□ 0.29
LINC00661-202ENST00000547102 ADGBQ8N7X0 1667 aa16.85■□□□□ 0.29
LINC00661-202ENST00000547102 A2MP01023 1474 aa16.85■□□□□ 0.29
LINC00661-202ENST00000547102 CCDC141Q6ZP82 1450 aa16.85■□□□□ 0.29
LINC00661-202ENST00000547102 PLXNC1O60486 1568 aa16.85■□□□□ 0.29
LINC00661-202ENST00000547102 CNTLNQ9NXG0 1405 aa16.84■□□□□ 0.29
LINC00661-202ENST00000547102 PREX1Q8TCU6 1659 aa16.84■□□□□ 0.29
LINC00661-202ENST00000547102 RTEL1-TNFRSF6BF6WH68 1400 aa16.82■□□□□ 0.28
LINC00661-202ENST00000547102 RSPH4AQ5TD94 716 aa16.82■□□□□ 0.28
LINC00661-202ENST00000547102 CEBPAP49715 358 aaPredicted RBP16.81■□□□□ 0.28
LINC00661-202ENST00000547102 C3P01024 1663 aa16.81■□□□□ 0.28
LINC00661-202ENST00000547102 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
LINC00661-202ENST00000547102 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
LINC00661-202ENST00000547102 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
LINC00661-202ENST00000547102 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
LINC00661-202ENST00000547102 MROH2AA6NES4 1674 aa16.78■□□□□ 0.28
LINC00661-202ENST00000547102 HSPA2P54652 639 aa16.78■□□□□ 0.28
LINC00661-202ENST00000547102 MIA2Q96PC5 1412 aa16.78■□□□□ 0.28
LINC00661-202ENST00000547102 SETD1BQ9UPS6 1966 aaKnown RBP16.77■□□□□ 0.28
LINC00661-202ENST00000547102 TSPY4P0CV99 314 aa16.76■□□□□ 0.27
LINC00661-202ENST00000547102 TSPY10P0CW01 314 aa16.76■□□□□ 0.27
LINC00661-202ENST00000547102 CLTCQ00610 1675 aaKnown RBP16.75■□□□□ 0.27
LINC00661-202ENST00000547102 DHX29Q7Z478 1369 aaKnown RBP16.75■□□□□ 0.27
LINC00661-202ENST00000547102 GGT6Q6P531 493 aa16.74■□□□□ 0.27
LINC00661-202ENST00000547102 NPATQ14207 1427 aa16.72■□□□□ 0.27
LINC00661-202ENST00000547102 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
LINC00661-202ENST00000547102 ZMYM3Q14202 1370 aa16.72■□□□□ 0.27
LINC00661-202ENST00000547102 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
LINC00661-202ENST00000547102 KIF3BO15066 747 aa16.69■□□□□ 0.26
LINC00661-202ENST00000547102 PTPN23Q9H3S7 1636 aa16.69■□□□□ 0.26
LINC00661-202ENST00000547102 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
LINC00661-202ENST00000547102 KDM5DQ9BY66 1539 aa16.67■□□□□ 0.26
LINC00661-202ENST00000547102 FGD6Q6ZV73 1430 aa16.66■□□□□ 0.26
LINC00661-202ENST00000547102 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
LINC00661-202ENST00000547102 CROCC2H7BZ55 1655 aa16.65■□□□□ 0.26
LINC00661-202ENST00000547102 SHANK2Q9UPX8 1470 aa16.65■□□□□ 0.26
LINC00661-202ENST00000547102 PTPRKQ15262 1439 aa16.64■□□□□ 0.25
LINC00661-202ENST00000547102 MYO3AQ8NEV4 1616 aa16.64■□□□□ 0.25
LINC00661-202ENST00000547102 EIF2AK4Q9P2K8 1649 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms