RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 RAPGEF3O95398 923 aa25.42■■□□□ 1.66
DDX54-204ENST00000546898 EFCAB2Q5VUJ9 269 aa25.41■■□□□ 1.66
DDX54-204ENST00000546898 VPS8Q8N3P4 1428 aa25.39■■□□□ 1.66
DDX54-204ENST00000546898 EHBP1L1Q8N3D4 1523 aa25.39■■□□□ 1.66
DDX54-204ENST00000546898 ARHGEF40Q8TER5 1519 aa25.39■■□□□ 1.66
DDX54-204ENST00000546898 KDM4FA0A1W2PPD8 638 aa25.38■■□□□ 1.65
DDX54-204ENST00000546898 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
DDX54-204ENST00000546898 SCAPERQ9BY12 1400 aa25.37■■□□□ 1.65
DDX54-204ENST00000546898 MTUS2Q5JR59 1369 aa25.36■■□□□ 1.65
DDX54-204ENST00000546898 MAGI2Q86UL8 1455 aa25.34■■□□□ 1.65
DDX54-204ENST00000546898 TIAM1Q13009 1591 aa25.32■■□□□ 1.64
DDX54-204ENST00000546898 ABCC1P33527 1531 aa25.32■■□□□ 1.64
DDX54-204ENST00000546898 ZFYVE16Q7Z3T8 1539 aa25.32■■□□□ 1.64
DDX54-204ENST00000546898 ITSN2Q9NZM3 1697 aa25.31■■□□□ 1.64
DDX54-204ENST00000546898 ZNF518AQ6AHZ1 1483 aa25.3■■□□□ 1.64
DDX54-204ENST00000546898 GPATCH8Q9UKJ3 1502 aaKnown RBP25.29■■□□□ 1.64
DDX54-204ENST00000546898 KDM5CP41229 1560 aa25.29■■□□□ 1.64
DDX54-204ENST00000546898 SUPT6HQ7KZ85 1726 aaKnown RBP25.27■■□□□ 1.64
DDX54-204ENST00000546898 SAMD9LQ8IVG5 1584 aa25.25■■□□□ 1.63
DDX54-204ENST00000546898 HECW2Q9P2P5 1572 aa25.24■■□□□ 1.63
DDX54-204ENST00000546898 MAP3K1Q13233 1512 aa25.24■■□□□ 1.63
DDX54-204ENST00000546898 CCNB3Q8WWL7 1395 aa25.24■■□□□ 1.63
DDX54-204ENST00000546898 YEATS2Q9ULM3 1422 aa25.23■■□□□ 1.63
DDX54-204ENST00000546898 BCORL1Q5H9F3 1711 aa25.23■■□□□ 1.63
DDX54-204ENST00000546898 ADAMTSL3P82987 1691 aa25.21■■□□□ 1.63
DDX54-204ENST00000546898 ARHGEF12Q9NZN5 1544 aa25.2■■□□□ 1.62
DDX54-204ENST00000546898 PLEKHH2Q8IVE3 1493 aa25.19■■□□□ 1.62
DDX54-204ENST00000546898 SYCP2Q9BX26 1530 aa25.17■■□□□ 1.62
DDX54-204ENST00000546898 NCOA2Q15596 1464 aa25.17■■□□□ 1.62
DDX54-204ENST00000546898 LRRC9Q6ZRR7 1453 aa25.17■■□□□ 1.62
DDX54-204ENST00000546898 SIGLEC1Q9BZZ2 1709 aa25.17■■□□□ 1.62
DDX54-204ENST00000546898 MLH3Q9UHC1 1453 aa25.16■■□□□ 1.62
DDX54-204ENST00000546898 TRAPPC8Q9Y2L5 1435 aa25.16■■□□□ 1.62
DDX54-204ENST00000546898 ATP10AO60312 1499 aa25.15■■□□□ 1.62
DDX54-204ENST00000546898 CFDP1Q9UEE9 299 aaPredicted RBP25.15■■□□□ 1.62
DDX54-204ENST00000546898 DIP2CQ9Y2E4 1556 aa25.14■■□□□ 1.62
DDX54-204ENST00000546898 C9orf84Q5VXU9 1444 aa25.14■■□□□ 1.62
DDX54-204ENST00000546898 KIAA1107Q9UPP5 1409 aa25.14■■□□□ 1.62
DDX54-204ENST00000546898 AFAP1Q8N556 730 aa25.14■■□□□ 1.62
DDX54-204ENST00000546898 REREQ9P2R6 1566 aa25.13■■□□□ 1.61
DDX54-204ENST00000546898 ARID4BQ4LE39 1312 aaPredicted RBP25.12■■□□□ 1.61
DDX54-204ENST00000546898 ABCA6Q8N139 1617 aa25.12■■□□□ 1.61
DDX54-204ENST00000546898 ZNF777Q9ULD5 760 aaPredicted RBP25.12■■□□□ 1.61
DDX54-204ENST00000546898 MADDQ8WXG6 1647 aa25.12■■□□□ 1.61
DDX54-204ENST00000546898 KIDINS220Q9ULH0 1771 aa25.11■■□□□ 1.61
DDX54-204ENST00000546898 INO80Q9ULG1 1556 aaPredicted RBP25.06■■□□□ 1.6
DDX54-204ENST00000546898 RIMS1Q86UR5 1692 aaKnown RBP25.05■■□□□ 1.6
DDX54-204ENST00000546898 MYT1LQ9UL68 1186 aa25.05■■□□□ 1.6
DDX54-204ENST00000546898 FER1L4A9Z1Z3 1794 aa25.04■■□□□ 1.6
DDX54-204ENST00000546898 PTPRMP28827 1452 aa25.03■■□□□ 1.6
DDX54-204ENST00000546898 ATP7AQ04656 1500 aa25.03■■□□□ 1.6
DDX54-204ENST00000546898 CAMSAP2Q08AD1 1489 aa25.02■■□□□ 1.6
DDX54-204ENST00000546898 HNRNPMP52272 730 aaKnown RBP eCLIP25.02■■□□□ 1.6
DDX54-204ENST00000546898 APLP2Q06481 763 aa25.01■■□□□ 1.59
DDX54-204ENST00000546898 MBD5Q9P267 1494 aa25.01■■□□□ 1.59
DDX54-204ENST00000546898 AGLP35573 1532 aa25.01■■□□□ 1.59
DDX54-204ENST00000546898 KANK4Q5T7N3 995 aaPredicted RBP25■■□□□ 1.59
DDX54-204ENST00000546898 SPAG9O60271 1321 aaKnown RBP25■■□□□ 1.59
DDX54-204ENST00000546898 ZNF644Q9H582 1327 aaPredicted RBP24.97■■□□□ 1.59
DDX54-204ENST00000546898 ARHGEF5Q12774 1597 aa24.97■■□□□ 1.59
DDX54-204ENST00000546898 ADGBQ8N7X0 1667 aa24.96■■□□□ 1.59
DDX54-204ENST00000546898 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
DDX54-204ENST00000546898 MYOM3Q5VTT5 1437 aa24.95■■□□□ 1.59
DDX54-204ENST00000546898 MIA2Q96PC5 1412 aa24.95■■□□□ 1.58
DDX54-204ENST00000546898 PLXNC1O60486 1568 aa24.93■■□□□ 1.58
DDX54-204ENST00000546898 RTEL1-TNFRSF6BF6WH68 1400 aa24.92■■□□□ 1.58
DDX54-204ENST00000546898 MLECQ14165 292 aa24.91■■□□□ 1.58
DDX54-204ENST00000546898 RSPH4AQ5TD94 716 aa24.9■■□□□ 1.58
DDX54-204ENST00000546898 A2MP01023 1474 aa24.88■■□□□ 1.57
DDX54-204ENST00000546898 MAST1Q9Y2H9 1570 aa24.84■■□□□ 1.57
DDX54-204ENST00000546898 PTPN23Q9H3S7 1636 aa24.83■■□□□ 1.57
DDX54-204ENST00000546898 MROH2AA6NES4 1674 aa24.79■■□□□ 1.56
DDX54-204ENST00000546898 CROCC2H7BZ55 1655 aa24.79■■□□□ 1.56
DDX54-204ENST00000546898 FGD6Q6ZV73 1430 aa24.78■■□□□ 1.56
DDX54-204ENST00000546898 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
DDX54-204ENST00000546898 C3P01024 1663 aa24.78■■□□□ 1.56
DDX54-204ENST00000546898 TSPY4P0CV99 314 aa24.77■■□□□ 1.56
DDX54-204ENST00000546898 TSPY10P0CW01 314 aa24.77■■□□□ 1.56
DDX54-204ENST00000546898 TCOF1Q13428 1488 aaKnown RBP24.77■■□□□ 1.56
DDX54-204ENST00000546898 DHX29Q7Z478 1369 aaKnown RBP24.76■■□□□ 1.55
DDX54-204ENST00000546898 PREX1Q8TCU6 1659 aa24.75■■□□□ 1.55
DDX54-204ENST00000546898 ESF1Q9H501 851 aaKnown RBP24.74■■□□□ 1.55
DDX54-204ENST00000546898 DNMT1P26358 1616 aaKnown RBP24.74■■□□□ 1.55
DDX54-204ENST00000546898 LMTK3Q96Q04 1460 aa24.73■■□□□ 1.55
DDX54-204ENST00000546898 SHANK2Q9UPX8 1470 aa24.73■■□□□ 1.55
DDX54-204ENST00000546898 CLTCQ00610 1675 aaKnown RBP24.72■■□□□ 1.55
DDX54-204ENST00000546898 SETD1BQ9UPS6 1966 aaKnown RBP24.72■■□□□ 1.55
DDX54-204ENST00000546898 ILDR1Q86SU0 546 aaPredicted RBP24.71■■□□□ 1.55
DDX54-204ENST00000546898 PLPPR3Q6T4P5 718 aa24.7■■□□□ 1.54
DDX54-204ENST00000546898 FAM135AQ9P2D6 1515 aa24.69■■□□□ 1.54
DDX54-204ENST00000546898 EIF2AK4Q9P2K8 1649 aaKnown RBP24.68■■□□□ 1.54
DDX54-204ENST00000546898 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
DDX54-204ENST00000546898 ABCC5O15440 1437 aa24.66■■□□□ 1.54
DDX54-204ENST00000546898 DAPK1P53355 1430 aa24.66■■□□□ 1.54
DDX54-204ENST00000546898 CEBPAP49715 358 aaPredicted RBP24.65■■□□□ 1.54
DDX54-204ENST00000546898 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.54
DDX54-204ENST00000546898 DUOX2Q9NRD8 1548 aa24.63■■□□□ 1.53
DDX54-204ENST00000546898 GGT6Q6P531 493 aa24.63■■□□□ 1.53
DDX54-204ENST00000546898 KDM5DQ9BY66 1539 aa24.61■■□□□ 1.53
DDX54-204ENST00000546898 ZMYM3Q14202 1370 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms