RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 ZNF710Q8N1W2 664 aa15.34■□□□□ 0.05
CHPT1-203ENST00000546873 TMEM92Q6UXU6 159 aa15.33■□□□□ 0.04
CHPT1-203ENST00000546873 RIMBP2O15034 1052 aa15.32■□□□□ 0.04
CHPT1-203ENST00000546873 TMC2Q8TDI7 906 aa15.31■□□□□ 0.04
CHPT1-203ENST00000546873 HOXB3P14651 431 aaPredicted RBP15.25■□□□□ 0.03
CHPT1-203ENST00000546873 C2orf72A6NCS6 295 aa15.24■□□□□ 0.03
CHPT1-203ENST00000546873 PCDH10Q9P2E7 1040 aa15.24■□□□□ 0.03
CHPT1-203ENST00000546873 MARVELD3Q96A59 401 aa15.22■□□□□ 0.03
CHPT1-203ENST00000546873 EMP3P54852 163 aa15.21■□□□□ 0.03
CHPT1-203ENST00000546873 GTPBP6O43824 516 aaPredicted RBP15.2■□□□□ 0.02
CHPT1-203ENST00000546873 KIF3CO14782 793 aa15.19■□□□□ 0.02
CHPT1-203ENST00000546873 BBXQ8WY36 941 aaPredicted RBP15.19■□□□□ 0.02
CHPT1-203ENST00000546873 ZSWIM6Q9HCJ5 1215 aa15.19■□□□□ 0.02
CHPT1-203ENST00000546873 HOXB1P14653 301 aaPredicted RBP15.15■□□□□ 0.02
CHPT1-203ENST00000546873 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.15■□□□□ 0.02
CHPT1-203ENST00000546873 GPHNQ9NQX3 736 aaPredicted RBP15.12■□□□□ 0.01
CHPT1-203ENST00000546873 CDAN1Q8IWY9 1227 aa15.1■□□□□ 0.01
CHPT1-203ENST00000546873 FAM205CA6NFA0 338 aa15.08■□□□□ 0
CHPT1-203ENST00000546873 FOXK1P85037 733 aa15.06■□□□□ 0
CHPT1-203ENST00000546873 ERBB3P21860 1342 aa15.06■□□□□ 0
CHPT1-203ENST00000546873 PDE4AP27815 886 aa15.05■□□□□ -0
CHPT1-203ENST00000546873 GPR153Q6NV75 609 aa15.05■□□□□ -0
CHPT1-203ENST00000546873 ARSIQ5FYB1 569 aa15.04■□□□□ -0
CHPT1-203ENST00000546873 PLPP6Q8IY26 295 aa15.04■□□□□ -0
CHPT1-203ENST00000546873 SPRYD3Q8NCJ5 442 aa15.04■□□□□ -0
CHPT1-203ENST00000546873 SLC34A2O95436 690 aa15.03■□□□□ -0
CHPT1-203ENST00000546873 HS3ST6Q96QI5 342 aa15.02■□□□□ -0
CHPT1-203ENST00000546873 DSG2Q14126 1118 aa15.01□□□□□ -0.01
CHPT1-203ENST00000546873 CRISPLD2Q9H0B8 497 aa15□□□□□ -0.01
CHPT1-203ENST00000546873 PLSCR2Q9NRY7 297 aa14.98□□□□□ -0.01
CHPT1-203ENST00000546873 PCDHGA4Q9Y5G9 962 aa14.98□□□□□ -0.01
CHPT1-203ENST00000546873 TBC1D12O60347 775 aa14.96□□□□□ -0.01
CHPT1-203ENST00000546873 PPP1R15BQ5SWA1 713 aa14.96□□□□□ -0.01
CHPT1-203ENST00000546873 LARP6Q9BRS8 491 aaKnown RBP14.95□□□□□ -0.02
CHPT1-203ENST00000546873 VARS2Q5ST30 1063 aaKnown RBP14.94□□□□□ -0.02
CHPT1-203ENST00000546873 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
CHPT1-203ENST00000546873 PAXIP1Q6ZW49 1069 aaPredicted RBP14.93□□□□□ -0.02
CHPT1-203ENST00000546873 KHSRPQ92945 711 aaKnown RBP eCLIP14.93□□□□□ -0.023e-9■■■□□ 15.8
CHPT1-203ENST00000546873 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
CHPT1-203ENST00000546873 NUDT7P0C024 238 aa14.92□□□□□ -0.02
CHPT1-203ENST00000546873 PTCD2Q8WV60 388 aaKnown RBP14.92□□□□□ -0.02
CHPT1-203ENST00000546873 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
CHPT1-203ENST00000546873 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
CHPT1-203ENST00000546873 POTEB3A0JP26 581 aa14.89□□□□□ -0.03
CHPT1-203ENST00000546873 POTEBQ6S5H4 581 aa14.89□□□□□ -0.03
CHPT1-203ENST00000546873 ABCC9O60706 1549 aa14.88□□□□□ -0.03
CHPT1-203ENST00000546873 CADPS2Q86UW7 1296 aa14.84□□□□□ -0.03
CHPT1-203ENST00000546873 UPF1Q92900 1129 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHPT1-203ENST00000546873 MFSD10Q14728 455 aa14.83□□□□□ -0.04
CHPT1-203ENST00000546873 ZNF687Q8N1G0 1237 aa14.83□□□□□ -0.04
CHPT1-203ENST00000546873 PSDA5PKW4 1024 aaPredicted RBP14.82□□□□□ -0.04
CHPT1-203ENST00000546873 LHX6Q9UPM6 363 aa14.82□□□□□ -0.04
CHPT1-203ENST00000546873 OXER1Q8TDS5 423 aa14.81□□□□□ -0.04
CHPT1-203ENST00000546873 KRTAP3-3Q9BYR6 98 aa14.76□□□□□ -0.05
CHPT1-203ENST00000546873 KRTAP3-2Q9BYR7 98 aa14.76□□□□□ -0.05
CHPT1-203ENST00000546873 MAP3K9P80192 1104 aa14.74□□□□□ -0.05
CHPT1-203ENST00000546873 KDM4FA0A1W2PPD8 638 aa14.71□□□□□ -0.05
CHPT1-203ENST00000546873 PBX2P40425 430 aa14.71□□□□□ -0.05
CHPT1-203ENST00000546873 PPP4R3BQ5MIZ7 849 aa14.7□□□□□ -0.06
CHPT1-203ENST00000546873 WDR70Q9NW82 654 aa14.7□□□□□ -0.06
CHPT1-203ENST00000546873 SPNS2Q8IVW8 549 aa14.69□□□□□ -0.06
CHPT1-203ENST00000546873 EVI5O60447 810 aa14.66□□□□□ -0.06
CHPT1-203ENST00000546873 EMILIN3Q9NT22 766 aa14.65□□□□□ -0.06
CHPT1-203ENST00000546873 KCNH8Q96L42 1107 aa14.64□□□□□ -0.07
CHPT1-203ENST00000546873 ANKRD13DQ6ZTN6 518 aa14.63□□□□□ -0.07
CHPT1-203ENST00000546873 CAMK2BQ13554 666 aa14.62□□□□□ -0.07
CHPT1-203ENST00000546873 ZNF454Q8N9F8 522 aa14.61□□□□□ -0.07
CHPT1-203ENST00000546873 ARHGAP33O14559 1287 aa14.6□□□□□ -0.07
CHPT1-203ENST00000546873 LSM11P83369 360 aaKnown RBP eCLIP14.6□□□□□ -0.07
CHPT1-203ENST00000546873 ANO8Q9HCE9 1232 aaPredicted RBP14.6□□□□□ -0.07
CHPT1-203ENST00000546873 MMRN1Q13201 1228 aa14.59□□□□□ -0.07
CHPT1-203ENST00000546873 AXIN2Q9Y2T1 843 aa14.58□□□□□ -0.08
CHPT1-203ENST00000546873 PTGER2P43116 358 aa14.56□□□□□ -0.08
CHPT1-203ENST00000546873 E2F4Q16254 413 aa14.56□□□□□ -0.08
CHPT1-203ENST00000546873 DPYSL4O14531 572 aa14.55□□□□□ -0.08
CHPT1-203ENST00000546873 FOSBP53539 338 aa14.55□□□□□ -0.08
CHPT1-203ENST00000546873 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
CHPT1-203ENST00000546873 TSHZ2Q9NRE2 1034 aa14.54□□□□□ -0.08
CHPT1-203ENST00000546873 POTEEQ6S8J3 1075 aa14.51□□□□□ -0.09
CHPT1-203ENST00000546873 KCNK17Q96T54 332 aa14.51□□□□□ -0.09
CHPT1-203ENST00000546873 ZDHHC16Q969W1 377 aa14.5□□□□□ -0.09
CHPT1-203ENST00000546873 BCL2L12Q9HB09 334 aa14.49□□□□□ -0.09
CHPT1-203ENST00000546873 PTPREP23469 700 aa14.48□□□□□ -0.09
CHPT1-203ENST00000546873 PSEN2P49810 448 aa14.48□□□□□ -0.09
CHPT1-203ENST00000546873 MYT1LQ9UL68 1186 aa14.48□□□□□ -0.09
CHPT1-203ENST00000546873 SPDYE16A6NNV3 312 aaPredicted RBP14.47□□□□□ -0.09
CHPT1-203ENST00000546873 PLCB2Q00722 1185 aa14.47□□□□□ -0.09
CHPT1-203ENST00000546873 FBXW7Q969H0 707 aa14.46□□□□□ -0.09
CHPT1-203ENST00000546873 TK2O00142 265 aa14.44□□□□□ -0.1
CHPT1-203ENST00000546873 PHF14O94880 888 aa14.44□□□□□ -0.1
CHPT1-203ENST00000546873 TYW1BQ6NUM6 668 aa14.44□□□□□ -0.1
CHPT1-203ENST00000546873 ADGRD1Q6QNK2 874 aa14.44□□□□□ -0.1
CHPT1-203ENST00000546873 STAC3Q96MF2 364 aa14.44□□□□□ -0.1
CHPT1-203ENST00000546873 RNF166Q96A37 237 aaPredicted RBP14.43□□□□□ -0.1
CHPT1-203ENST00000546873 DMRTA1Q5VZB9 504 aa14.42□□□□□ -0.1
CHPT1-203ENST00000546873 EPAS1Q99814 870 aa14.42□□□□□ -0.1
CHPT1-203ENST00000546873 PCDHGA10Q9Y5H3 936 aa14.42□□□□□ -0.1
CHPT1-203ENST00000546873 PDIA6Q15084 440 aa14.41□□□□□ -0.1
CHPT1-203ENST00000546873 ADAM33Q9BZ11 813 aa14.41□□□□□ -0.1
CHPT1-203ENST00000546873 ARIH1Q9Y4X5 557 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms