RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 TRIM44Q96DX7 344 aaPredicted RBP2.65□□□□□ -1.99
CFTR-207ENST00000546407 AMOTL2Q9Y2J4 779 aa2.65□□□□□ -1.99
CFTR-207ENST00000546407 RIPOR2Q9Y4F9 1068 aa2.65□□□□□ -1.99
CFTR-207ENST00000546407 MSH5O43196 834 aa2.64□□□□□ -1.99
CFTR-207ENST00000546407 ERCC3P19447 782 aa2.64□□□□□ -1.99
CFTR-207ENST00000546407 CALRP27797 417 aaKnown RBP2.64□□□□□ -1.99
CFTR-207ENST00000546407 VASPP50552 380 aaPredicted RBP2.64□□□□□ -1.99
CFTR-207ENST00000546407 OS9Q13438 667 aaPredicted RBP2.64□□□□□ -1.99
CFTR-207ENST00000546407 LMOD2Q6P5Q4 547 aa2.64□□□□□ -1.99
CFTR-207ENST00000546407 AEBP1Q8IUX7 1158 aa2.64□□□□□ -1.99
CFTR-207ENST00000546407 CEP120Q8N960 986 aa2.64□□□□□ -1.99
CFTR-207ENST00000546407 CCER1Q8TC90 406 aaPredicted RBP2.64□□□□□ -1.99
CFTR-207ENST00000546407 MYH16Q9H6N6 1097 aa2.64□□□□□ -1.99
CFTR-207ENST00000546407 NOP58Q9Y2X3 529 aaKnown RBP2.64□□□□□ -1.99
CFTR-207ENST00000546407 CADPSQ9ULU8 1353 aa2.63□□□□□ -1.99
CFTR-207ENST00000546407 ARID3CA6NKF2 412 aa2.63□□□□□ -1.99
CFTR-207ENST00000546407 TTC36A6NLP5 189 aa2.63□□□□□ -1.99
CFTR-207ENST00000546407 KDM4AO75164 1064 aa2.63□□□□□ -1.99
CFTR-207ENST00000546407 GORABQ5T7V8 394 aa2.63□□□□□ -1.99
CFTR-207ENST00000546407 CASC1Q6TDU7 716 aa2.63□□□□□ -1.99
CFTR-207ENST00000546407 NOL8Q76FK4 1167 aaKnown RBP2.63□□□□□ -1.99
CFTR-207ENST00000546407 CCDC82Q8N4S0 544 aa2.63□□□□□ -1.99
CFTR-207ENST00000546407 GZF1Q9H116 711 aaPredicted RBP2.63□□□□□ -1.99
CFTR-207ENST00000546407 KCNG1Q9UIX4 513 aa2.63□□□□□ -1.99
CFTR-207ENST00000546407 LAS1LQ9Y4W2 734 aaKnown RBP2.63□□□□□ -1.99
CFTR-207ENST00000546407 PATL2C9JE40 543 aaKnown RBP2.62□□□□□ -1.99
CFTR-207ENST00000546407 GTF2E1P29083 439 aaPredicted RBP2.62□□□□□ -1.99
CFTR-207ENST00000546407 ANP32AP39687 249 aaKnown RBP2.62□□□□□ -1.99
CFTR-207ENST00000546407 NBPF1Q3BBV0 1214 aa2.62□□□□□ -1.99
CFTR-207ENST00000546407 TSHZ1Q6ZSZ6 1077 aa2.62□□□□□ -1.99
CFTR-207ENST00000546407 NBPF11Q86T75 865 aa2.62□□□□□ -1.99
CFTR-207ENST00000546407 SPATA32Q96LK8 384 aa2.62□□□□□ -1.99
CFTR-207ENST00000546407 UBA5Q9GZZ9 404 aa2.62□□□□□ -1.99
CFTR-207ENST00000546407 CHMP4BQ9H444 224 aaKnown RBP2.62□□□□□ -1.99
CFTR-207ENST00000546407 DNAJC5BQ9UF47 199 aa2.62□□□□□ -1.99
CFTR-207ENST00000546407 ZNF316A6NFI3 1004 aaPredicted RBP2.61□□□□□ -1.99
CFTR-207ENST00000546407 TPD52L2O43399 206 aaKnown RBP2.61□□□□□ -1.99
CFTR-207ENST00000546407 ANP32CO43423 234 aa2.61□□□□□ -1.99
CFTR-207ENST00000546407 RRP9O43818 475 aaKnown RBP2.61□□□□□ -1.99
CFTR-207ENST00000546407 NRDCO43847 1150 aa2.61□□□□□ -1.99
CFTR-207ENST00000546407 MCCD1P59942 119 aaPredicted RBP2.61□□□□□ -1.99
CFTR-207ENST00000546407 NEUROD1Q13562 356 aa2.61□□□□□ -1.99
CFTR-207ENST00000546407 FAM50AQ14320 339 aaKnown RBP2.61□□□□□ -1.99
CFTR-207ENST00000546407 MYBPC2Q14324 1141 aa2.61□□□□□ -1.99
CFTR-207ENST00000546407 NBPF20Q3BBV1 942 aa2.61□□□□□ -1.99
CFTR-207ENST00000546407 P3H3Q8IVL6 736 aa2.61□□□□□ -1.99
CFTR-207ENST00000546407 FBXW7Q969H0 707 aa2.61□□□□□ -1.99
CFTR-207ENST00000546407 STAC3Q96MF2 364 aa2.61□□□□□ -1.99
CFTR-207ENST00000546407 TERF2IPQ9NYB0 399 aa2.61□□□□□ -1.99
CFTR-207ENST00000546407 ZC3H4Q9UPT8 1303 aaKnown RBP2.61□□□□□ -1.99
CFTR-207ENST00000546407 CALD1Q05682 793 aaKnown RBP2.6□□□□□ -1.99
CFTR-207ENST00000546407 SETDB1Q15047 1291 aa2.6□□□□□ -1.99
CFTR-207ENST00000546407 RALBP1Q15311 655 aa2.6□□□□□ -1.99
CFTR-207ENST00000546407 RINLQ6ZS11 566 aa2.6□□□□□ -1.99
CFTR-207ENST00000546407 BARGINQ6ZT62 677 aa2.6□□□□□ -1.99
CFTR-207ENST00000546407 SDR16C5Q8N3Y7 309 aa2.6□□□□□ -1.99
CFTR-207ENST00000546407 SGSM3Q96HU1 749 aa2.6□□□□□ -1.99
CFTR-207ENST00000546407 C11orf95C9JLR9 678 aaPredicted RBP2.59□□□□□ -1.99
CFTR-207ENST00000546407 ECM2O94769 699 aaPredicted RBP2.59□□□□□ -1.99
CFTR-207ENST00000546407 BRD1O95696 1058 aa2.59□□□□□ -1.99
CFTR-207ENST00000546407 LIG1P18858 919 aa2.59□□□□□ -1.99
CFTR-207ENST00000546407 FLIIQ13045 1269 aa2.59□□□□□ -1.99
CFTR-207ENST00000546407 IFNLR1Q8IU57 520 aaPredicted RBP2.59□□□□□ -1.99
CFTR-207ENST00000546407 NME8Q8N427 588 aa2.59□□□□□ -1.99
CFTR-207ENST00000546407 MKL1Q969V6 931 aa2.59□□□□□ -1.99
CFTR-207ENST00000546407 HIRIP3Q9BW71 556 aaPredicted RBP2.59□□□□□ -1.99
CFTR-207ENST00000546407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.59□□□□□ -1.99
CFTR-207ENST00000546407 IGSF5Q9NSI5 407 aa2.59□□□□□ -1.99
CFTR-207ENST00000546407 RBM27Q9P2N5 1060 aaKnown RBP2.59□□□□□ -1.99
CFTR-207ENST00000546407 HDAC5Q9UQL6 1122 aa2.59□□□□□ -1.99
CFTR-207ENST00000546407 PPME1Q9Y570 386 aa2.59□□□□□ -1.99
CFTR-207ENST00000546407 NUB1Q9Y5A7 615 aa2.59□□□□□ -1.99
CFTR-207ENST00000546407 CENPJQ9HC77 1338 aaPredicted RBP2.59□□□□□ -2
CFTR-207ENST00000546407 ANKRD62A6NC57 917 aa2.58□□□□□ -2
CFTR-207ENST00000546407 A6NJR5 290 aa2.58□□□□□ -2
CFTR-207ENST00000546407 EXOC5O00471 708 aa2.58□□□□□ -2
CFTR-207ENST00000546407 SMARCA5O60264 1052 aaPredicted RBP2.58□□□□□ -2
CFTR-207ENST00000546407 MARCH6O60337 910 aa2.58□□□□□ -2
CFTR-207ENST00000546407 ZRANB2O95218 330 aaKnown RBP eCLIP2.58□□□□□ -2
CFTR-207ENST00000546407 CCDC96Q2M329 555 aa2.58□□□□□ -2
CFTR-207ENST00000546407 RBM26Q5T8P6 1007 aaKnown RBP2.58□□□□□ -2
CFTR-207ENST00000546407 CCDC181Q5TID7 509 aa2.58□□□□□ -2
CFTR-207ENST00000546407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.58□□□□□ -2
CFTR-207ENST00000546407 FAM9BQ8IZU0 186 aa2.58□□□□□ -2
CFTR-207ENST00000546407 CACTIN-AS1Q8N1I8 211 aa2.58□□□□□ -2
CFTR-207ENST00000546407 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.58□□□□□ -2
CFTR-207ENST00000546407 MORC4Q8TE76 937 aa2.58□□□□□ -2
CFTR-207ENST00000546407 TRIM41Q8WV44 630 aa2.58□□□□□ -2
CFTR-207ENST00000546407 JADE2Q9NQC1 790 aa2.58□□□□□ -2
CFTR-207ENST00000546407 MAGEC2Q9UBF1 373 aaPredicted RBP2.58□□□□□ -2
CFTR-207ENST00000546407 FEZ2Q9UHY8 353 aaPredicted RBP2.58□□□□□ -2
CFTR-207ENST00000546407 TESPA1A2RU30 521 aaPredicted RBP2.57□□□□□ -2
CFTR-207ENST00000546407 TCERG1O14776 1098 aaKnown RBP2.57□□□□□ -2
CFTR-207ENST00000546407 APPP05067 770 aa2.57□□□□□ -2
CFTR-207ENST00000546407 NBPF9Q3BBW0 867 aa2.57□□□□□ -2
CFTR-207ENST00000546407 LONRF3Q496Y0 759 aa2.57□□□□□ -2
CFTR-207ENST00000546407 WDR78Q5VTH9 848 aa2.57□□□□□ -2
CFTR-207ENST00000546407 KRBA2Q6ZNG9 492 aa2.57□□□□□ -2
CFTR-207ENST00000546407 APBB1IPQ7Z5R6 666 aaPredicted RBP2.57□□□□□ -2
CFTR-207ENST00000546407 OTUD6BQ8N6M0 293 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms