RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 ZFYVE16Q7Z3T8 1539 aa19.27■□□□□ 0.68
UBC-214ENST00000546271 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
UBC-214ENST00000546271 HECW2Q9P2P5 1572 aa19.27■□□□□ 0.67
UBC-214ENST00000546271 PLCH2O75038 1416 aa19.26■□□□□ 0.67
UBC-214ENST00000546271 PREX2Q70Z35 1606 aa19.26■□□□□ 0.67
UBC-214ENST00000546271 MADDQ8WXG6 1647 aa19.25■□□□□ 0.67
UBC-214ENST00000546271 CDC42BPBQ9Y5S2 1711 aa19.25■□□□□ 0.67
UBC-214ENST00000546271 POGZQ7Z3K3 1410 aa19.23■□□□□ 0.67
UBC-214ENST00000546271 RIMS1Q86UR5 1692 aaKnown RBP19.23■□□□□ 0.67
UBC-214ENST00000546271 CDC42BPAQ5VT25 1732 aa19.22■□□□□ 0.67
UBC-214ENST00000546271 SIGLEC1Q9BZZ2 1709 aa19.22■□□□□ 0.67
UBC-214ENST00000546271 ARID4BQ4LE39 1312 aaPredicted RBP19.22■□□□□ 0.67
UBC-214ENST00000546271 SCAPERQ9BY12 1400 aa19.21■□□□□ 0.67
UBC-214ENST00000546271 EFCAB2Q5VUJ9 269 aa19.19■□□□□ 0.66
UBC-214ENST00000546271 ITSN2Q9NZM3 1697 aa19.19■□□□□ 0.66
UBC-214ENST00000546271 YEATS2Q9ULM3 1422 aa19.18■□□□□ 0.66
UBC-214ENST00000546271 FER1L4A9Z1Z3 1794 aa19.17■□□□□ 0.66
UBC-214ENST00000546271 MAGI2Q86UL8 1455 aa19.16■□□□□ 0.66
UBC-214ENST00000546271 PTPRMP28827 1452 aa19.16■□□□□ 0.66
UBC-214ENST00000546271 ABCC1P33527 1531 aa19.15■□□□□ 0.66
UBC-214ENST00000546271 ZNF518AQ6AHZ1 1483 aa19.14■□□□□ 0.65
UBC-214ENST00000546271 KDM5CP41229 1560 aa19.14■□□□□ 0.65
UBC-214ENST00000546271 ABCA6Q8N139 1617 aa19.11■□□□□ 0.65
UBC-214ENST00000546271 MTUS2Q5JR59 1369 aa19.1■□□□□ 0.65
UBC-214ENST00000546271 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
UBC-214ENST00000546271 DIP2CQ9Y2E4 1556 aa19.09■□□□□ 0.65
UBC-214ENST00000546271 SAMD9LQ8IVG5 1584 aa19.08■□□□□ 0.65
UBC-214ENST00000546271 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.64
UBC-214ENST00000546271 MYT1LQ9UL68 1186 aa19.07■□□□□ 0.64
UBC-214ENST00000546271 ATP10AO60312 1499 aa19.07■□□□□ 0.64
UBC-214ENST00000546271 EHBP1L1Q8N3D4 1523 aa19.06■□□□□ 0.64
UBC-214ENST00000546271 GPATCH8Q9UKJ3 1502 aaKnown RBP19.06■□□□□ 0.64
UBC-214ENST00000546271 SYCP2Q9BX26 1530 aa19.05■□□□□ 0.64
UBC-214ENST00000546271 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
UBC-214ENST00000546271 MLECQ14165 292 aa19.04■□□□□ 0.64
UBC-214ENST00000546271 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
UBC-214ENST00000546271 AFAP1Q8N556 730 aa19.03■□□□□ 0.64
UBC-214ENST00000546271 KIDINS220Q9ULH0 1771 aa19.03■□□□□ 0.64
UBC-214ENST00000546271 TRAPPC8Q9Y2L5 1435 aa19.02■□□□□ 0.64
UBC-214ENST00000546271 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
UBC-214ENST00000546271 TIAM1Q13009 1591 aa19.02■□□□□ 0.63
UBC-214ENST00000546271 REREQ9P2R6 1566 aa19.02■□□□□ 0.63
UBC-214ENST00000546271 ZNF777Q9ULD5 760 aaPredicted RBP19■□□□□ 0.63
UBC-214ENST00000546271 MLH3Q9UHC1 1453 aa18.99■□□□□ 0.63
UBC-214ENST00000546271 CFDP1Q9UEE9 299 aaPredicted RBP18.99■□□□□ 0.63
UBC-214ENST00000546271 SUPT6HQ7KZ85 1726 aaKnown RBP18.99■□□□□ 0.63
UBC-214ENST00000546271 LMTK3Q96Q04 1460 aa18.97■□□□□ 0.63
UBC-214ENST00000546271 INO80Q9ULG1 1556 aaPredicted RBP18.96■□□□□ 0.63
UBC-214ENST00000546271 PREX1Q8TCU6 1659 aa18.95■□□□□ 0.62
UBC-214ENST00000546271 PLEKHH2Q8IVE3 1493 aa18.94■□□□□ 0.62
UBC-214ENST00000546271 ATP7AQ04656 1500 aa18.94■□□□□ 0.62
UBC-214ENST00000546271 KIAA1107Q9UPP5 1409 aa18.93■□□□□ 0.62
UBC-214ENST00000546271 NCOA2Q15596 1464 aa18.93■□□□□ 0.62
UBC-214ENST00000546271 LRRC9Q6ZRR7 1453 aa18.93■□□□□ 0.62
UBC-214ENST00000546271 HNRNPMP52272 730 aaKnown RBP eCLIP18.93■□□□□ 0.625e-20■■■□□ 16.6
UBC-214ENST00000546271 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
UBC-214ENST00000546271 C3P01024 1663 aa18.92■□□□□ 0.62
UBC-214ENST00000546271 AGLP35573 1532 aa18.91■□□□□ 0.62
UBC-214ENST00000546271 ZNF644Q9H582 1327 aaPredicted RBP18.9■□□□□ 0.62
UBC-214ENST00000546271 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
UBC-214ENST00000546271 KANK4Q5T7N3 995 aaPredicted RBP18.89■□□□□ 0.61
UBC-214ENST00000546271 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
UBC-214ENST00000546271 PLXNC1O60486 1568 aa18.85■□□□□ 0.61
UBC-214ENST00000546271 MBD5Q9P267 1494 aa18.85■□□□□ 0.61
UBC-214ENST00000546271 MROH2AA6NES4 1674 aa18.85■□□□□ 0.61
UBC-214ENST00000546271 CLTCQ00610 1675 aaKnown RBP18.84■□□□□ 0.61
UBC-214ENST00000546271 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
UBC-214ENST00000546271 APLP2Q06481 763 aa18.83■□□□□ 0.6
UBC-214ENST00000546271 CEBPAP49715 358 aaPredicted RBP18.82■□□□□ 0.6
UBC-214ENST00000546271 HSPA2P54652 639 aa18.82■□□□□ 0.6
UBC-214ENST00000546271 ESF1Q9H501 851 aaKnown RBP18.82■□□□□ 0.6
UBC-214ENST00000546271 A2MP01023 1474 aa18.81■□□□□ 0.6
UBC-214ENST00000546271 CCDC141Q6ZP82 1450 aa18.79■□□□□ 0.6
UBC-214ENST00000546271 UHRF1BP1Q6BDS2 1440 aa18.78■□□□□ 0.6
UBC-214ENST00000546271 CNTLNQ9NXG0 1405 aa18.77■□□□□ 0.6
UBC-214ENST00000546271 RSPH4AQ5TD94 716 aa18.77■□□□□ 0.6
UBC-214ENST00000546271 ILDR1Q86SU0 546 aaPredicted RBP18.77■□□□□ 0.6
UBC-214ENST00000546271 RTEL1-TNFRSF6BF6WH68 1400 aa18.76■□□□□ 0.59
UBC-214ENST00000546271 MYOM3Q5VTT5 1437 aa18.76■□□□□ 0.59
UBC-214ENST00000546271 MIA2Q96PC5 1412 aa18.75■□□□□ 0.59
UBC-214ENST00000546271 ARHGEF5Q12774 1597 aa18.75■□□□□ 0.59
UBC-214ENST00000546271 STRCQ7RTU9 1775 aa18.73■□□□□ 0.59
UBC-214ENST00000546271 MYO3AQ8NEV4 1616 aa18.72■□□□□ 0.59
UBC-214ENST00000546271 SETD1BQ9UPS6 1966 aaKnown RBP18.72■□□□□ 0.59
UBC-214ENST00000546271 TSPY4P0CV99 314 aa18.69■□□□□ 0.58
UBC-214ENST00000546271 TSPY10P0CW01 314 aa18.69■□□□□ 0.58
UBC-214ENST00000546271 CROCC2H7BZ55 1655 aa18.69■□□□□ 0.58
UBC-214ENST00000546271 ZNF142P52746 1687 aaPredicted RBP18.69■□□□□ 0.58
UBC-214ENST00000546271 MAST1Q9Y2H9 1570 aa18.68■□□□□ 0.58
UBC-214ENST00000546271 DHX29Q7Z478 1369 aaKnown RBP18.68■□□□□ 0.58
UBC-214ENST00000546271 GGT6Q6P531 493 aa18.67■□□□□ 0.58
UBC-214ENST00000546271 NPATQ14207 1427 aa18.66■□□□□ 0.58
UBC-214ENST00000546271 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
UBC-214ENST00000546271 ZMYM3Q14202 1370 aa18.64■□□□□ 0.57
UBC-214ENST00000546271 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.57
UBC-214ENST00000546271 FGD6Q6ZV73 1430 aa18.63■□□□□ 0.57
UBC-214ENST00000546271 CEP170BQ9Y4F5 1589 aaPredicted RBP18.62■□□□□ 0.57
UBC-214ENST00000546271 CAMSAP1Q5T5Y3 1602 aa18.62■□□□□ 0.57
UBC-214ENST00000546271 EIF2AK4Q9P2K8 1649 aaKnown RBP18.62■□□□□ 0.57
UBC-214ENST00000546271 TCOF1Q13428 1488 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms