RNA–Protein interactions for RNA: ENST00000546135.1

AC078962.4-201, humanhuman

TSL 3 BASIC

Gene AC078962.4, Length 254 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078962.4-201ENST00000546135 EMP3P54852 163 aa11.61□□□□□ -0.55
AC078962.4-201ENST00000546135 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
AC078962.4-201ENST00000546135 KIF3CO14782 793 aa11.59□□□□□ -0.55
AC078962.4-201ENST00000546135 ZNF710Q8N1W2 664 aa11.59□□□□□ -0.55
AC078962.4-201ENST00000546135 POTEB3A0JP26 581 aa11.58□□□□□ -0.56
AC078962.4-201ENST00000546135 POTEBQ6S5H4 581 aa11.58□□□□□ -0.56
AC078962.4-201ENST00000546135 RIMBP2O15034 1052 aa11.56□□□□□ -0.56
AC078962.4-201ENST00000546135 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
AC078962.4-201ENST00000546135 C2orf72A6NCS6 295 aa11.55□□□□□ -0.56
AC078962.4-201ENST00000546135 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
AC078962.4-201ENST00000546135 NKX1-1Q15270 411 aaPredicted RBP11.55□□□□□ -0.56
AC078962.4-201ENST00000546135 GPR153Q6NV75 609 aa11.54□□□□□ -0.56
AC078962.4-201ENST00000546135 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
AC078962.4-201ENST00000546135 TMC2Q8TDI7 906 aa11.47□□□□□ -0.57
AC078962.4-201ENST00000546135 ERBB3P21860 1342 aa11.45□□□□□ -0.58
AC078962.4-201ENST00000546135 ARSIQ5FYB1 569 aa11.45□□□□□ -0.58
AC078962.4-201ENST00000546135 KRTAP3-3Q9BYR6 98 aa11.45□□□□□ -0.58
AC078962.4-201ENST00000546135 KRTAP3-2Q9BYR7 98 aa11.45□□□□□ -0.58
AC078962.4-201ENST00000546135 RYDENQ9NUL5 291 aaKnown RBP11.45□□□□□ -0.58
AC078962.4-201ENST00000546135 SLC34A2O95436 690 aa11.44□□□□□ -0.58
AC078962.4-201ENST00000546135 SPNS2Q8IVW8 549 aa11.42□□□□□ -0.58
AC078962.4-201ENST00000546135 GTPBP6O43824 516 aaPredicted RBP11.4□□□□□ -0.58
AC078962.4-201ENST00000546135 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
AC078962.4-201ENST00000546135 KHSRPQ92945 711 aaKnown RBP eCLIP11.4□□□□□ -0.58
AC078962.4-201ENST00000546135 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.58
AC078962.4-201ENST00000546135 FOXK1P85037 733 aa11.39□□□□□ -0.59
AC078962.4-201ENST00000546135 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
AC078962.4-201ENST00000546135 PCDHGA4Q9Y5G9 962 aa11.36□□□□□ -0.59
AC078962.4-201ENST00000546135 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
AC078962.4-201ENST00000546135 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
AC078962.4-201ENST00000546135 MMRN1Q13201 1228 aa11.34□□□□□ -0.59
AC078962.4-201ENST00000546135 DSG2Q14126 1118 aa11.34□□□□□ -0.59
AC078962.4-201ENST00000546135 PLPP6Q8IY26 295 aa11.34□□□□□ -0.59
AC078962.4-201ENST00000546135 NUDT7P0C024 238 aa11.32□□□□□ -0.6
AC078962.4-201ENST00000546135 PTCD2Q8WV60 388 aaKnown RBP11.32□□□□□ -0.6
AC078962.4-201ENST00000546135 CRISPLD2Q9H0B8 497 aa11.32□□□□□ -0.6
AC078962.4-201ENST00000546135 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
AC078962.4-201ENST00000546135 LHX6Q9UPM6 363 aa11.27□□□□□ -0.61
AC078962.4-201ENST00000546135 NCKAP5LQ9HCH0 1330 aa11.27□□□□□ -0.61
AC078962.4-201ENST00000546135 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
AC078962.4-201ENST00000546135 PDE4AP27815 886 aa11.24□□□□□ -0.61
AC078962.4-201ENST00000546135 OXER1Q8TDS5 423 aa11.22□□□□□ -0.61
AC078962.4-201ENST00000546135 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
AC078962.4-201ENST00000546135 PPP1R15BQ5SWA1 713 aa11.21□□□□□ -0.61
AC078962.4-201ENST00000546135 TBC1D12O60347 775 aa11.2□□□□□ -0.62
AC078962.4-201ENST00000546135 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
AC078962.4-201ENST00000546135 POTEEQ6S8J3 1075 aa11.19□□□□□ -0.62
AC078962.4-201ENST00000546135 PSDA5PKW4 1024 aaPredicted RBP11.18□□□□□ -0.62
AC078962.4-201ENST00000546135 PBX2P40425 430 aa11.18□□□□□ -0.62
AC078962.4-201ENST00000546135 MFSD10Q14728 455 aa11.17□□□□□ -0.62
AC078962.4-201ENST00000546135 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
AC078962.4-201ENST00000546135 CADPS2Q86UW7 1296 aa11.16□□□□□ -0.62
AC078962.4-201ENST00000546135 LSM11P83369 360 aaKnown RBP eCLIP11.15□□□□□ -0.62
AC078962.4-201ENST00000546135 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
AC078962.4-201ENST00000546135 DDX27Q96GQ7 796 aaKnown RBP11.14□□□□□ -0.63
AC078962.4-201ENST00000546135 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
AC078962.4-201ENST00000546135 AXIN2Q9Y2T1 843 aa11.12□□□□□ -0.63
AC078962.4-201ENST00000546135 ARHGAP33O14559 1287 aa11.1□□□□□ -0.63
AC078962.4-201ENST00000546135 PTGER2P43116 358 aa11.1□□□□□ -0.63
AC078962.4-201ENST00000546135 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
AC078962.4-201ENST00000546135 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
AC078962.4-201ENST00000546135 PPP4R3BQ5MIZ7 849 aa11.07□□□□□ -0.64
AC078962.4-201ENST00000546135 RNF166Q96A37 237 aaPredicted RBP11.07□□□□□ -0.64
AC078962.4-201ENST00000546135 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
AC078962.4-201ENST00000546135 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
AC078962.4-201ENST00000546135 EVI5O60447 810 aa11.04□□□□□ -0.64
AC078962.4-201ENST00000546135 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.04□□□□□ -0.64
AC078962.4-201ENST00000546135 PSEN2P49810 448 aa11.03□□□□□ -0.64
AC078962.4-201ENST00000546135 FOSBP53539 338 aa11.03□□□□□ -0.64
AC078962.4-201ENST00000546135 CAMK2BQ13554 666 aa11.02□□□□□ -0.65
AC078962.4-201ENST00000546135 TK2O00142 265 aa11.01□□□□□ -0.65
AC078962.4-201ENST00000546135 MAP3K9P80192 1104 aa11.01□□□□□ -0.65
AC078962.4-201ENST00000546135 DMRTA1Q5VZB9 504 aa11.01□□□□□ -0.65
AC078962.4-201ENST00000546135 ADGRD1Q6QNK2 874 aa11.01□□□□□ -0.65
AC078962.4-201ENST00000546135 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
AC078962.4-201ENST00000546135 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
AC078962.4-201ENST00000546135 JPH4Q96JJ6 628 aa10.98□□□□□ -0.65
AC078962.4-201ENST00000546135 HRO43593 1189 aa10.97□□□□□ -0.65
AC078962.4-201ENST00000546135 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
AC078962.4-201ENST00000546135 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
AC078962.4-201ENST00000546135 ZDHHC16Q969W1 377 aa10.93□□□□□ -0.66
AC078962.4-201ENST00000546135 CFAP44Q96MT7 982 aa10.93□□□□□ -0.66
AC078962.4-201ENST00000546135 KCNH8Q96L42 1107 aa10.92□□□□□ -0.66
AC078962.4-201ENST00000546135 SLC4A5Q9BY07 1137 aa10.92□□□□□ -0.66
AC078962.4-201ENST00000546135 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
AC078962.4-201ENST00000546135 VPS9D1Q9Y2B5 631 aa10.91□□□□□ -0.66
AC078962.4-201ENST00000546135 PCDHGA10Q9Y5H3 936 aa10.91□□□□□ -0.66
AC078962.4-201ENST00000546135 PTPREP23469 700 aa10.9□□□□□ -0.66
AC078962.4-201ENST00000546135 DPYSL4O14531 572 aa10.89□□□□□ -0.67
AC078962.4-201ENST00000546135 PHF14O94880 888 aa10.87□□□□□ -0.67
AC078962.4-201ENST00000546135 ZBED2Q9BTP6 218 aa10.87□□□□□ -0.67
AC078962.4-201ENST00000546135 BHMG1C9JSJ3 638 aaPredicted RBP10.85□□□□□ -0.67
AC078962.4-201ENST00000546135 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
AC078962.4-201ENST00000546135 FBXW7Q969H0 707 aa10.85□□□□□ -0.67
AC078962.4-201ENST00000546135 E2F4Q16254 413 aa10.82□□□□□ -0.68
AC078962.4-201ENST00000546135 EPAS1Q99814 870 aa10.82□□□□□ -0.68
AC078962.4-201ENST00000546135 HCSTQ9UBK5 93 aa10.82□□□□□ -0.68
AC078962.4-201ENST00000546135 ARIH1Q9Y4X5 557 aaPredicted RBP10.82□□□□□ -0.68
AC078962.4-201ENST00000546135 PPP1R3GB7ZBB8 358 aa10.8□□□□□ -0.68
AC078962.4-201ENST00000546135 PDIA6Q15084 440 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms