RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 FANCAO15360 1455 aa25.36■■□□□ 1.65
LIMS2-217ENST00000545738 ITSN2Q9NZM3 1697 aa25.35■■□□□ 1.65
LIMS2-217ENST00000545738 TEX14Q8IWB6 1497 aa25.33■■□□□ 1.65
LIMS2-217ENST00000545738 MYOM3Q5VTT5 1437 aa25.32■■□□□ 1.64
LIMS2-217ENST00000545738 SAMD9LQ8IVG5 1584 aa25.32■■□□□ 1.64
LIMS2-217ENST00000545738 COL17A1Q9UMD9 1497 aaPredicted RBP25.32■■□□□ 1.64
LIMS2-217ENST00000545738 NEO1Q92859 1461 aa25.3■■□□□ 1.64
LIMS2-217ENST00000545738 ZNF644Q9H582 1327 aaPredicted RBP25.3■■□□□ 1.64
LIMS2-217ENST00000545738 CFDP1Q9UEE9 299 aaPredicted RBP25.29■■□□□ 1.64
LIMS2-217ENST00000545738 AKNAQ7Z591 1439 aa25.28■■□□□ 1.64
LIMS2-217ENST00000545738 ARHGEF12Q9NZN5 1544 aa25.27■■□□□ 1.64
LIMS2-217ENST00000545738 CFAP74Q9C0B2 1584 aa25.27■■□□□ 1.64
LIMS2-217ENST00000545738 EFCAB2Q5VUJ9 269 aa25.26■■□□□ 1.63
LIMS2-217ENST00000545738 ABCC1P33527 1531 aa25.25■■□□□ 1.63
LIMS2-217ENST00000545738 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
LIMS2-217ENST00000545738 FGD6Q6ZV73 1430 aa25.24■■□□□ 1.63
LIMS2-217ENST00000545738 ADGRL1O94910 1474 aa25.24■■□□□ 1.63
LIMS2-217ENST00000545738 CAMSAP2Q08AD1 1489 aa25.22■■□□□ 1.63
LIMS2-217ENST00000545738 MIA2Q96PC5 1412 aa25.22■■□□□ 1.63
LIMS2-217ENST00000545738 FRMPD1Q5SYB0 1578 aa25.21■■□□□ 1.63
LIMS2-217ENST00000545738 SYCP2Q9BX26 1530 aa25.21■■□□□ 1.63
LIMS2-217ENST00000545738 PTPN23Q9H3S7 1636 aa25.2■■□□□ 1.63
LIMS2-217ENST00000545738 KDM6BO15054 1643 aa25.2■■□□□ 1.62
LIMS2-217ENST00000545738 SCAPERQ9BY12 1400 aa25.2■■□□□ 1.62
LIMS2-217ENST00000545738 RICTORQ6R327 1708 aa25.19■■□□□ 1.62
LIMS2-217ENST00000545738 TRAPPC8Q9Y2L5 1435 aa25.17■■□□□ 1.62
LIMS2-217ENST00000545738 RAPGEF3O95398 923 aa25.17■■□□□ 1.62
LIMS2-217ENST00000545738 MBD5Q9P267 1494 aa25.17■■□□□ 1.62
LIMS2-217ENST00000545738 TCOF1Q13428 1488 aaKnown RBP25.16■■□□□ 1.62
LIMS2-217ENST00000545738 HNRNPMP52272 730 aaKnown RBP eCLIP25.15■■□□□ 1.62
LIMS2-217ENST00000545738 POGZQ7Z3K3 1410 aa25.14■■□□□ 1.62
LIMS2-217ENST00000545738 KIAA1107Q9UPP5 1409 aa25.14■■□□□ 1.61
LIMS2-217ENST00000545738 DENND4BO75064 1496 aaPredicted RBP25.13■■□□□ 1.61
LIMS2-217ENST00000545738 RRBP1Q9P2E9 1410 aaKnown RBP25.11■■□□□ 1.61
LIMS2-217ENST00000545738 AFAP1Q8N556 730 aa25.11■■□□□ 1.61
LIMS2-217ENST00000545738 PLEKHH2Q8IVE3 1493 aa25.1■■□□□ 1.61
LIMS2-217ENST00000545738 KDM5CP41229 1560 aa25.09■■□□□ 1.61
LIMS2-217ENST00000545738 ARHGEF5Q12774 1597 aa25.06■■□□□ 1.6
LIMS2-217ENST00000545738 ZNF518AQ6AHZ1 1483 aa25.06■■□□□ 1.6
LIMS2-217ENST00000545738 FAM50AQ14320 339 aaKnown RBP25.04■■□□□ 1.6
LIMS2-217ENST00000545738 ZMYM4Q5VZL5 1548 aa25.04■■□□□ 1.6
LIMS2-217ENST00000545738 DNMT1P26358 1616 aaKnown RBP25.04■■□□□ 1.6
LIMS2-217ENST00000545738 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
LIMS2-217ENST00000545738 ABCC5O15440 1437 aa25.02■■□□□ 1.6
LIMS2-217ENST00000545738 CROCC2H7BZ55 1655 aa25.01■■□□□ 1.59
LIMS2-217ENST00000545738 KIDINS220Q9ULH0 1771 aa25■■□□□ 1.59
LIMS2-217ENST00000545738 DAPK1P53355 1430 aa25■■□□□ 1.59
LIMS2-217ENST00000545738 PTPRKQ15262 1439 aa25■■□□□ 1.59
LIMS2-217ENST00000545738 YEATS2Q9ULM3 1422 aa24.99■■□□□ 1.59
LIMS2-217ENST00000545738 HECW2Q9P2P5 1572 aa24.99■■□□□ 1.59
LIMS2-217ENST00000545738 INO80Q9ULG1 1556 aaPredicted RBP24.99■■□□□ 1.59
LIMS2-217ENST00000545738 ZFYVE16Q7Z3T8 1539 aa24.98■■□□□ 1.59
LIMS2-217ENST00000545738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.97■■□□□ 1.59
LIMS2-217ENST00000545738 MLH3Q9UHC1 1453 aa24.96■■□□□ 1.59
LIMS2-217ENST00000545738 ABCA6Q8N139 1617 aa24.95■■□□□ 1.58
LIMS2-217ENST00000545738 ATP7AQ04656 1500 aa24.95■■□□□ 1.58
LIMS2-217ENST00000545738 SPAG9O60271 1321 aaKnown RBP24.93■■□□□ 1.58
LIMS2-217ENST00000545738 ARHGEF40Q8TER5 1519 aa24.93■■□□□ 1.58
LIMS2-217ENST00000545738 MAST1Q9Y2H9 1570 aa24.93■■□□□ 1.58
LIMS2-217ENST00000545738 C9orf84Q5VXU9 1444 aa24.93■■□□□ 1.58
LIMS2-217ENST00000545738 SIGLEC1Q9BZZ2 1709 aa24.92■■□□□ 1.58
LIMS2-217ENST00000545738 DIP2CQ9Y2E4 1556 aa24.92■■□□□ 1.58
LIMS2-217ENST00000545738 SHANK2Q9UPX8 1470 aa24.91■■□□□ 1.58
LIMS2-217ENST00000545738 RSPH4AQ5TD94 716 aa24.91■■□□□ 1.58
LIMS2-217ENST00000545738 MAGI2Q86UL8 1455 aa24.9■■□□□ 1.58
LIMS2-217ENST00000545738 ITGAEP38570 1179 aa24.89■■□□□ 1.58
LIMS2-217ENST00000545738 CHIC2Q9UKJ5 165 aa24.89■■□□□ 1.57
LIMS2-217ENST00000545738 RTEL1-TNFRSF6BF6WH68 1400 aa24.87■■□□□ 1.57
LIMS2-217ENST00000545738 ADGBQ8N7X0 1667 aa24.87■■□□□ 1.57
LIMS2-217ENST00000545738 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
LIMS2-217ENST00000545738 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
LIMS2-217ENST00000545738 PLXNC1O60486 1568 aa24.84■■□□□ 1.57
LIMS2-217ENST00000545738 MYT1LQ9UL68 1186 aa24.83■■□□□ 1.57
LIMS2-217ENST00000545738 ADGRL2O95490 1459 aa24.83■■□□□ 1.57
LIMS2-217ENST00000545738 NCOA1Q15788 1441 aa24.81■■□□□ 1.56
LIMS2-217ENST00000545738 ATP10AO60312 1499 aa24.8■■□□□ 1.56
LIMS2-217ENST00000545738 RRP7BPQ9NSQ0 103 aa24.77■■□□□ 1.56
LIMS2-217ENST00000545738 REREQ9P2R6 1566 aa24.77■■□□□ 1.56
LIMS2-217ENST00000545738 KIF15Q9NS87 1388 aa24.76■■□□□ 1.55
LIMS2-217ENST00000545738 A2MP01023 1474 aa24.76■■□□□ 1.55
LIMS2-217ENST00000545738 ROCK1Q13464 1354 aa24.74■■□□□ 1.55
LIMS2-217ENST00000545738 ANKRD30AQ9BXX3 1397 aa24.74■■□□□ 1.55
LIMS2-217ENST00000545738 DHX29Q7Z478 1369 aaKnown RBP24.71■■□□□ 1.55
LIMS2-217ENST00000545738 DUOX2Q9NRD8 1548 aa24.7■■□□□ 1.54
LIMS2-217ENST00000545738 AGLP35573 1532 aa24.68■■□□□ 1.54
LIMS2-217ENST00000545738 NAIPQ13075 1403 aa24.67■■□□□ 1.54
LIMS2-217ENST00000545738 GCC2Q8IWJ2 1684 aa24.66■■□□□ 1.54
LIMS2-217ENST00000545738 HFM1A2PYH4 1435 aa24.65■■□□□ 1.54
LIMS2-217ENST00000545738 BCORL1Q5H9F3 1711 aa24.64■■□□□ 1.54
LIMS2-217ENST00000545738 TRIM26Q12899 539 aaPredicted RBP24.64■■□□□ 1.53
LIMS2-217ENST00000545738 ERBINQ96RT1 1412 aa24.63■■□□□ 1.53
LIMS2-217ENST00000545738 ANKRD50Q9ULJ7 1429 aa24.63■■□□□ 1.53
LIMS2-217ENST00000545738 EIF2AK4Q9P2K8 1649 aaKnown RBP24.62■■□□□ 1.53
LIMS2-217ENST00000545738 MROH1Q8NDA8 1641 aa24.62■■□□□ 1.53
LIMS2-217ENST00000545738 ARID4BQ4LE39 1312 aaPredicted RBP24.61■■□□□ 1.53
LIMS2-217ENST00000545738 KIF3BO15066 747 aa24.6■■□□□ 1.53
LIMS2-217ENST00000545738 RNF17Q9BXT8 1623 aaKnown RBP24.59■■□□□ 1.53
LIMS2-217ENST00000545738 MLECQ14165 292 aa24.58■■□□□ 1.53
LIMS2-217ENST00000545738 DEPDC5O75140 1603 aa24.57■■□□□ 1.52
LIMS2-217ENST00000545738 ADAMTSL3P82987 1691 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms