RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-233ENST00000545720 YEATS2Q9ULM3 1422 aa39.05■■■■□ 3.84
RAP1B-233ENST00000545720 POGZQ7Z3K3 1410 aa39.04■■■■□ 3.84
RAP1B-233ENST00000545720 SCAPERQ9BY12 1400 aa39.04■■■■□ 3.84
RAP1B-233ENST00000545720 TROQ12816 1431 aaPredicted RBP39.03■■■■□ 3.84
RAP1B-233ENST00000545720 PCF11O94913 1555 aaKnown RBP39.01■■■■□ 3.84
RAP1B-233ENST00000545720 MAGI2Q86UL8 1455 aa39.01■■■■□ 3.84
RAP1B-233ENST00000545720 ILDR1Q86SU0 546 aaPredicted RBP38.99■■■■□ 3.83
RAP1B-233ENST00000545720 CLIP1P30622 1438 aa38.97■■■■□ 3.83
RAP1B-233ENST00000545720 ARHGAP5Q13017 1502 aa38.94■■■■□ 3.82
RAP1B-233ENST00000545720 EFCAB2Q5VUJ9 269 aa38.94■■■■□ 3.82
RAP1B-233ENST00000545720 CDC42BPBQ9Y5S2 1711 aa38.91■■■■□ 3.82
RAP1B-233ENST00000545720 FER1L4A9Z1Z3 1794 aa38.9■■■■□ 3.82
RAP1B-233ENST00000545720 CASKIN1Q8WXD9 1431 aa38.89■■■■□ 3.82
RAP1B-233ENST00000545720 CCDC18Q5T9S5 1454 aa38.88■■■■□ 3.81
RAP1B-233ENST00000545720 PREX2Q70Z35 1606 aa38.84■■■■□ 3.81
RAP1B-233ENST00000545720 ZNF518AQ6AHZ1 1483 aa38.83■■■■□ 3.81
RAP1B-233ENST00000545720 LMTK3Q96Q04 1460 aa38.82■■■■□ 3.81
RAP1B-233ENST00000545720 ATP10AO60312 1499 aa38.81■■■■□ 3.8
RAP1B-233ENST00000545720 KDM5CP41229 1560 aa38.8■■■■□ 3.8
RAP1B-233ENST00000545720 MLECQ14165 292 aa38.8■■■■□ 3.8
RAP1B-233ENST00000545720 C9orf84Q5VXU9 1444 aa38.8■■■■□ 3.8
RAP1B-233ENST00000545720 PLPPR3Q6T4P5 718 aa38.78■■■■□ 3.8
RAP1B-233ENST00000545720 FYCO1Q9BQS8 1478 aa38.78■■■■□ 3.8
RAP1B-233ENST00000545720 CDC42BPAQ5VT25 1732 aa38.76■■■■□ 3.8
RAP1B-233ENST00000545720 ITSN2Q9NZM3 1697 aa38.72■■■■□ 3.79
RAP1B-233ENST00000545720 AFAP1Q8N556 730 aa38.72■■■■□ 3.79
RAP1B-233ENST00000545720 ARHGEF12Q9NZN5 1544 aa38.71■■■■□ 3.79
RAP1B-233ENST00000545720 ABCC1P33527 1531 aa38.7■■■■□ 3.79
RAP1B-233ENST00000545720 DIP2CQ9Y2E4 1556 aa38.69■■■■□ 3.78
RAP1B-233ENST00000545720 ABCA6Q8N139 1617 aa38.67■■■■□ 3.78
RAP1B-233ENST00000545720 MYT1LQ9UL68 1186 aa38.65■■■■□ 3.78
RAP1B-233ENST00000545720 TRAPPC8Q9Y2L5 1435 aa38.6■■■■□ 3.77
RAP1B-233ENST00000545720 REREQ9P2R6 1566 aa38.59■■■■□ 3.77
RAP1B-233ENST00000545720 MLH3Q9UHC1 1453 aa38.59■■■■□ 3.77
RAP1B-233ENST00000545720 HSPA2P54652 639 aa38.57■■■■□ 3.76
RAP1B-233ENST00000545720 KIDINS220Q9ULH0 1771 aa38.54■■■■□ 3.76
RAP1B-233ENST00000545720 PREX1Q8TCU6 1659 aa38.54■■■■□ 3.76
RAP1B-233ENST00000545720 SAMD9LQ8IVG5 1584 aa38.53■■■■□ 3.76
RAP1B-233ENST00000545720 SYCP2Q9BX26 1530 aa38.47■■■■□ 3.75
RAP1B-233ENST00000545720 GPATCH8Q9UKJ3 1502 aaKnown RBP38.47■■■■□ 3.75
RAP1B-233ENST00000545720 CEBPAP49715 358 aaPredicted RBP38.45■■■■□ 3.75
RAP1B-233ENST00000545720 ZNF777Q9ULD5 760 aaPredicted RBP38.45■■■■□ 3.75
RAP1B-233ENST00000545720 AGLP35573 1532 aa38.44■■■■□ 3.74
RAP1B-233ENST00000545720 C3P01024 1663 aa38.42■■■■□ 3.74
RAP1B-233ENST00000545720 SETD1BQ9UPS6 1966 aaKnown RBP38.4■■■■□ 3.74
RAP1B-233ENST00000545720 FBXO41Q8TF61 875 aa38.4■■■■□ 3.74
RAP1B-233ENST00000545720 MTUS2Q5JR59 1369 aa38.37■■■■□ 3.73
RAP1B-233ENST00000545720 CCNB3Q8WWL7 1395 aa38.34■■■■□ 3.73
RAP1B-233ENST00000545720 SUPT6HQ7KZ85 1726 aaKnown RBP38.32■■■■□ 3.72
RAP1B-233ENST00000545720 CEP162Q5TB80 1403 aa38.31■■■■□ 3.72
RAP1B-233ENST00000545720 HNRNPMP52272 730 aaKnown RBP eCLIP38.31■■■■□ 3.72
RAP1B-233ENST00000545720 PLEKHH2Q8IVE3 1493 aa38.3■■■■□ 3.72
RAP1B-233ENST00000545720 CFDP1Q9UEE9 299 aaPredicted RBP38.3■■■■□ 3.72
RAP1B-233ENST00000545720 ATP7AQ04656 1500 aa38.29■■■■□ 3.72
RAP1B-233ENST00000545720 EHBP1L1Q8N3D4 1523 aa38.29■■■■□ 3.72
RAP1B-233ENST00000545720 TIAM1Q13009 1591 aa38.28■■■■□ 3.72
RAP1B-233ENST00000545720 INO80Q9ULG1 1556 aaPredicted RBP38.28■■■■□ 3.72
RAP1B-233ENST00000545720 SPAG9O60271 1321 aaKnown RBP38.28■■■■□ 3.72
RAP1B-233ENST00000545720 UHRF1BP1Q6BDS2 1440 aa38.28■■■■□ 3.72
RAP1B-233ENST00000545720 KIAA1107Q9UPP5 1409 aa38.28■■■■□ 3.72
RAP1B-233ENST00000545720 ESF1Q9H501 851 aaKnown RBP38.27■■■■□ 3.72
RAP1B-233ENST00000545720 STRCQ7RTU9 1775 aa38.26■■■■□ 3.71
RAP1B-233ENST00000545720 MROH2AA6NES4 1674 aa38.2■■■■□ 3.71
RAP1B-233ENST00000545720 CNTLNQ9NXG0 1405 aa38.2■■■■□ 3.71
RAP1B-233ENST00000545720 PLXNC1O60486 1568 aa38.19■■■■□ 3.7
RAP1B-233ENST00000545720 ADGBQ8N7X0 1667 aa38.15■■■■□ 3.7
RAP1B-233ENST00000545720 A2MP01023 1474 aa38.13■■■■□ 3.69
RAP1B-233ENST00000545720 CLTCQ00610 1675 aaKnown RBP38.13■■■■□ 3.69
RAP1B-233ENST00000545720 ZNF644Q9H582 1327 aaPredicted RBP38.12■■■■□ 3.69
RAP1B-233ENST00000545720 MBD5Q9P267 1494 aa38.06■■■■□ 3.68
RAP1B-233ENST00000545720 CERKQ8TCT0 537 aa38.05■■■■□ 3.68
RAP1B-233ENST00000545720 NCOA2Q15596 1464 aa38.03■■■■□ 3.68
RAP1B-233ENST00000545720 DMRT2Q9Y5R5 561 aa38.02■■■■□ 3.68
RAP1B-233ENST00000545720 ZMYM3Q14202 1370 aa38.01■■■■□ 3.68
RAP1B-233ENST00000545720 NPATQ14207 1427 aa38.01■■■■□ 3.68
RAP1B-233ENST00000545720 CAMSAP2Q08AD1 1489 aa37.96■■■■□ 3.67
RAP1B-233ENST00000545720 GGT6Q6P531 493 aa37.95■■■■□ 3.67
RAP1B-233ENST00000545720 RTEL1-TNFRSF6BF6WH68 1400 aa37.94■■■■□ 3.66
RAP1B-233ENST00000545720 MYO3AQ8NEV4 1616 aa37.94■■■■□ 3.66
RAP1B-233ENST00000545720 CCDC141Q6ZP82 1450 aa37.92■■■■□ 3.66
RAP1B-233ENST00000545720 PTPRTO14522 1441 aa37.91■■■■□ 3.66
RAP1B-233ENST00000545720 NCOA1Q15788 1441 aa37.91■■■■□ 3.66
RAP1B-233ENST00000545720 ZNF142P52746 1687 aaPredicted RBP37.91■■■■□ 3.66
RAP1B-233ENST00000545720 CAMSAP1Q5T5Y3 1602 aa37.9■■■■□ 3.66
RAP1B-233ENST00000545720 VPS8Q8N3P4 1428 aa37.9■■■■□ 3.66
RAP1B-233ENST00000545720 LOC105371045A0A1W2PR82 267 aa37.9■■■■□ 3.66
RAP1B-233ENST00000545720 PTPRKQ15262 1439 aa37.86■■■■□ 3.65
RAP1B-233ENST00000545720 DHX29Q7Z478 1369 aaKnown RBP37.83■■■■□ 3.65
RAP1B-233ENST00000545720 LRRC9Q6ZRR7 1453 aa37.83■■■■□ 3.65
RAP1B-233ENST00000545720 CEP170BQ9Y4F5 1589 aaPredicted RBP37.82■■■■□ 3.65
RAP1B-233ENST00000545720 ARHGEF5Q12774 1597 aa37.81■■■■□ 3.64
RAP1B-233ENST00000545720 PPP6R1Q9UPN7 881 aa37.8■■■■□ 3.64
RAP1B-233ENST00000545720 RSPH4AQ5TD94 716 aa37.75■■■■□ 3.63
RAP1B-233ENST00000545720 LTBP4Q8N2S1 1624 aa37.73■■■■□ 3.63
RAP1B-233ENST00000545720 KIF3BO15066 747 aa37.73■■■■□ 3.63
RAP1B-233ENST00000545720 KDM5DQ9BY66 1539 aa37.71■■■■□ 3.63
RAP1B-233ENST00000545720 MAP3K1Q13233 1512 aa37.7■■■■□ 3.63
RAP1B-233ENST00000545720 PLA2R1Q13018 1463 aa37.7■■■■□ 3.63
RAP1B-233ENST00000545720 NCKAP5LQ9HCH0 1330 aa37.68■■■■□ 3.62
RAP1B-233ENST00000545720 FAM135AQ9P2D6 1515 aa37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms