RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 TEX14Q8IWB6 1497 aa20.07■□□□□ 0.8
CDCA3-210ENST00000545368 CDC42BPBQ9Y5S2 1711 aa20.07■□□□□ 0.8
CDCA3-210ENST00000545368 MYOM3Q5VTT5 1437 aa20.06■□□□□ 0.8
CDCA3-210ENST00000545368 PPRC1Q5VV67 1664 aaKnown RBP20.06■□□□□ 0.8
CDCA3-210ENST00000545368 PHLDB1Q86UU1 1377 aa20.05■□□□□ 0.8
CDCA3-210ENST00000545368 FANCAO15360 1455 aa20.03■□□□□ 0.8
CDCA3-210ENST00000545368 CFDP1Q9UEE9 299 aaPredicted RBP20.02■□□□□ 0.8
CDCA3-210ENST00000545368 MIA2Q96PC5 1412 aa20.01■□□□□ 0.79
CDCA3-210ENST00000545368 NEO1Q92859 1461 aa20■□□□□ 0.79
CDCA3-210ENST00000545368 EFCAB2Q5VUJ9 269 aa20■□□□□ 0.79
CDCA3-210ENST00000545368 FGD6Q6ZV73 1430 aa19.98■□□□□ 0.79
CDCA3-210ENST00000545368 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
CDCA3-210ENST00000545368 SAMD9LQ8IVG5 1584 aa19.96■□□□□ 0.79
CDCA3-210ENST00000545368 PTPN23Q9H3S7 1636 aa19.96■□□□□ 0.79
CDCA3-210ENST00000545368 AKNAQ7Z591 1439 aa19.95■□□□□ 0.78
CDCA3-210ENST00000545368 CAMSAP2Q08AD1 1489 aa19.95■□□□□ 0.78
CDCA3-210ENST00000545368 PLEKHH2Q8IVE3 1493 aa19.95■□□□□ 0.78
CDCA3-210ENST00000545368 ADGRL1O94910 1474 aa19.94■□□□□ 0.78
CDCA3-210ENST00000545368 ABCC1P33527 1531 aa19.93■□□□□ 0.78
CDCA3-210ENST00000545368 TCOF1Q13428 1488 aaKnown RBP19.92■□□□□ 0.78
CDCA3-210ENST00000545368 SYCP2Q9BX26 1530 aa19.91■□□□□ 0.78
CDCA3-210ENST00000545368 RRBP1Q9P2E9 1410 aaKnown RBP19.89■□□□□ 0.77
CDCA3-210ENST00000545368 SCAPERQ9BY12 1400 aa19.88■□□□□ 0.77
CDCA3-210ENST00000545368 KIAA1107Q9UPP5 1409 aa19.88■□□□□ 0.77
CDCA3-210ENST00000545368 ZNF644Q9H582 1327 aaPredicted RBP19.88■□□□□ 0.77
CDCA3-210ENST00000545368 KDM6BO15054 1643 aa19.87■□□□□ 0.77
CDCA3-210ENST00000545368 DENND4BO75064 1496 aaPredicted RBP19.86■□□□□ 0.77
CDCA3-210ENST00000545368 FAM50AQ14320 339 aaKnown RBP19.86■□□□□ 0.77
CDCA3-210ENST00000545368 ARHGEF5Q12774 1597 aa19.85■□□□□ 0.77
CDCA3-210ENST00000545368 ARHGEF12Q9NZN5 1544 aa19.84■□□□□ 0.77
CDCA3-210ENST00000545368 POGZQ7Z3K3 1410 aa19.84■□□□□ 0.77
CDCA3-210ENST00000545368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.83■□□□□ 0.77
CDCA3-210ENST00000545368 RICTORQ6R327 1708 aa19.83■□□□□ 0.77
CDCA3-210ENST00000545368 ZNF518AQ6AHZ1 1483 aa19.83■□□□□ 0.76
CDCA3-210ENST00000545368 CCDC141Q6ZP82 1450 aa19.83■□□□□ 0.76
CDCA3-210ENST00000545368 MBD5Q9P267 1494 aa19.82■□□□□ 0.76
CDCA3-210ENST00000545368 HNRNPMP52272 730 aaKnown RBP eCLIP19.82■□□□□ 0.76
CDCA3-210ENST00000545368 DNMT1P26358 1616 aaKnown RBP19.82■□□□□ 0.76
CDCA3-210ENST00000545368 RSPH4AQ5TD94 716 aa19.81■□□□□ 0.76
CDCA3-210ENST00000545368 FRMPD1Q5SYB0 1578 aa19.8■□□□□ 0.76
CDCA3-210ENST00000545368 TRAPPC8Q9Y2L5 1435 aa19.8■□□□□ 0.76
CDCA3-210ENST00000545368 CROCC2H7BZ55 1655 aa19.8■□□□□ 0.76
CDCA3-210ENST00000545368 KDM5CP41229 1560 aa19.78■□□□□ 0.76
CDCA3-210ENST00000545368 DAPK1P53355 1430 aa19.78■□□□□ 0.76
CDCA3-210ENST00000545368 COL17A1Q9UMD9 1497 aaPredicted RBP19.78■□□□□ 0.76
CDCA3-210ENST00000545368 RAPGEF3O95398 923 aa19.77■□□□□ 0.76
CDCA3-210ENST00000545368 ZMYM4Q5VZL5 1548 aa19.76■□□□□ 0.75
CDCA3-210ENST00000545368 ABCC5O15440 1437 aa19.76■□□□□ 0.75
CDCA3-210ENST00000545368 HECW2Q9P2P5 1572 aa19.75■□□□□ 0.75
CDCA3-210ENST00000545368 SHANK2Q9UPX8 1470 aa19.75■□□□□ 0.75
CDCA3-210ENST00000545368 TSPY4P0CV99 314 aa19.75■□□□□ 0.75
CDCA3-210ENST00000545368 TSPY10P0CW01 314 aa19.75■□□□□ 0.75
CDCA3-210ENST00000545368 AFAP1Q8N556 730 aa19.75■□□□□ 0.75
CDCA3-210ENST00000545368 MAST1Q9Y2H9 1570 aa19.74■□□□□ 0.75
CDCA3-210ENST00000545368 MYT1LQ9UL68 1186 aa19.73■□□□□ 0.75
CDCA3-210ENST00000545368 C9orf84Q5VXU9 1444 aa19.73■□□□□ 0.75
CDCA3-210ENST00000545368 INO80Q9ULG1 1556 aaPredicted RBP19.73■□□□□ 0.75
CDCA3-210ENST00000545368 SPAG9O60271 1321 aaKnown RBP19.73■□□□□ 0.75
CDCA3-210ENST00000545368 ADGBQ8N7X0 1667 aa19.71■□□□□ 0.75
CDCA3-210ENST00000545368 ATP7AQ04656 1500 aa19.71■□□□□ 0.75
CDCA3-210ENST00000545368 ZFYVE16Q7Z3T8 1539 aa19.71■□□□□ 0.75
CDCA3-210ENST00000545368 ITGAEP38570 1179 aa19.71■□□□□ 0.75
CDCA3-210ENST00000545368 MAGI2Q86UL8 1455 aa19.71■□□□□ 0.75
CDCA3-210ENST00000545368 MLH3Q9UHC1 1453 aa19.71■□□□□ 0.75
CDCA3-210ENST00000545368 RTEL1-TNFRSF6BF6WH68 1400 aa19.69■□□□□ 0.74
CDCA3-210ENST00000545368 KIDINS220Q9ULH0 1771 aa19.69■□□□□ 0.74
CDCA3-210ENST00000545368 ARHGEF40Q8TER5 1519 aa19.67■□□□□ 0.74
CDCA3-210ENST00000545368 PLXNC1O60486 1568 aa19.67■□□□□ 0.74
CDCA3-210ENST00000545368 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
CDCA3-210ENST00000545368 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
CDCA3-210ENST00000545368 ANKRD30AQ9BXX3 1397 aa19.65■□□□□ 0.74
CDCA3-210ENST00000545368 PTPRKQ15262 1439 aa19.65■□□□□ 0.74
CDCA3-210ENST00000545368 ADGRL2O95490 1459 aa19.65■□□□□ 0.74
CDCA3-210ENST00000545368 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
CDCA3-210ENST00000545368 DIP2CQ9Y2E4 1556 aa19.64■□□□□ 0.73
CDCA3-210ENST00000545368 ROCK1Q13464 1354 aa19.63■□□□□ 0.73
CDCA3-210ENST00000545368 YEATS2Q9ULM3 1422 aa19.62■□□□□ 0.73
CDCA3-210ENST00000545368 NCOA1Q15788 1441 aa19.59■□□□□ 0.73
CDCA3-210ENST00000545368 KIF15Q9NS87 1388 aa19.59■□□□□ 0.73
CDCA3-210ENST00000545368 ATP10AO60312 1499 aa19.59■□□□□ 0.73
CDCA3-210ENST00000545368 DUOX2Q9NRD8 1548 aa19.58■□□□□ 0.73
CDCA3-210ENST00000545368 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
CDCA3-210ENST00000545368 A2MP01023 1474 aa19.57■□□□□ 0.72
CDCA3-210ENST00000545368 RRP7BPQ9NSQ0 103 aa19.57■□□□□ 0.72
CDCA3-210ENST00000545368 REREQ9P2R6 1566 aa19.57■□□□□ 0.72
CDCA3-210ENST00000545368 HFM1A2PYH4 1435 aa19.54■□□□□ 0.72
CDCA3-210ENST00000545368 ERBINQ96RT1 1412 aa19.53■□□□□ 0.72
CDCA3-210ENST00000545368 DHX29Q7Z478 1369 aaKnown RBP19.53■□□□□ 0.72
CDCA3-210ENST00000545368 EIF2AK4Q9P2K8 1649 aaKnown RBP19.52■□□□□ 0.72
CDCA3-210ENST00000545368 NAIPQ13075 1403 aa19.51■□□□□ 0.71
CDCA3-210ENST00000545368 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
CDCA3-210ENST00000545368 AGLP35573 1532 aa19.49■□□□□ 0.71
CDCA3-210ENST00000545368 BCORL1Q5H9F3 1711 aa19.48■□□□□ 0.71
CDCA3-210ENST00000545368 SIGLEC1Q9BZZ2 1709 aa19.47■□□□□ 0.71
CDCA3-210ENST00000545368 ARID4BQ4LE39 1312 aaPredicted RBP19.46■□□□□ 0.71
CDCA3-210ENST00000545368 SETD5Q9C0A6 1442 aa19.45■□□□□ 0.7
CDCA3-210ENST00000545368 PCGF6Q9BYE7 350 aa19.45■□□□□ 0.7
CDCA3-210ENST00000545368 RNF17Q9BXT8 1623 aaKnown RBP19.43■□□□□ 0.7
CDCA3-210ENST00000545368 KIF3BO15066 747 aa19.43■□□□□ 0.7
CDCA3-210ENST00000545368 DEPDC5O75140 1603 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms