RNA–Protein interactions for RNA: ENST00000544543.5

ACSF3-215, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 5

Gene ACSF3, Length 883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-215ENST00000544543 ZFYVE16Q7Z3T8 1539 aa21.6■■□□□ 1.05
ACSF3-215ENST00000544543 MADDQ8WXG6 1647 aa21.6■■□□□ 1.05
ACSF3-215ENST00000544543 CDC42BPBQ9Y5S2 1711 aa21.59■■□□□ 1.05
ACSF3-215ENST00000544543 CLIP1P30622 1438 aa21.57■■□□□ 1.04
ACSF3-215ENST00000544543 KDM5CP41229 1560 aa21.55■■□□□ 1.04
ACSF3-215ENST00000544543 CDC42BPAQ5VT25 1732 aa21.55■■□□□ 1.04
ACSF3-215ENST00000544543 ARHGAP5Q13017 1502 aa21.55■■□□□ 1.04
ACSF3-215ENST00000544543 YEATS2Q9ULM3 1422 aa21.55■■□□□ 1.04
ACSF3-215ENST00000544543 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
ACSF3-215ENST00000544543 MAGI2Q86UL8 1455 aa21.53■■□□□ 1.04
ACSF3-215ENST00000544543 RIMS1Q86UR5 1692 aaKnown RBP21.52■■□□□ 1.04
ACSF3-215ENST00000544543 SCAPERQ9BY12 1400 aa21.52■■□□□ 1.04
ACSF3-215ENST00000544543 PTPRMP28827 1452 aa21.52■■□□□ 1.03
ACSF3-215ENST00000544543 ABCC1P33527 1531 aa21.51■■□□□ 1.03
ACSF3-215ENST00000544543 ITSN2Q9NZM3 1697 aa21.51■■□□□ 1.03
ACSF3-215ENST00000544543 CDK11AQ9UQ88 783 aaPredicted RBP21.5■■□□□ 1.03
ACSF3-215ENST00000544543 ZNF518AQ6AHZ1 1483 aa21.47■■□□□ 1.03
ACSF3-215ENST00000544543 FER1L4A9Z1Z3 1794 aa21.46■■□□□ 1.03
ACSF3-215ENST00000544543 ABCA6Q8N139 1617 aa21.45■■□□□ 1.02
ACSF3-215ENST00000544543 DIP2CQ9Y2E4 1556 aa21.44■■□□□ 1.02
ACSF3-215ENST00000544543 ARHGEF12Q9NZN5 1544 aa21.43■■□□□ 1.02
ACSF3-215ENST00000544543 C9orf84Q5VXU9 1444 aa21.42■■□□□ 1.02
ACSF3-215ENST00000544543 SAMD9LQ8IVG5 1584 aa21.42■■□□□ 1.02
ACSF3-215ENST00000544543 REREQ9P2R6 1566 aa21.41■■□□□ 1.02
ACSF3-215ENST00000544543 CEP162Q5TB80 1403 aa21.41■■□□□ 1.02
ACSF3-215ENST00000544543 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
ACSF3-215ENST00000544543 ATP10AO60312 1499 aa21.38■■□□□ 1.01
ACSF3-215ENST00000544543 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
ACSF3-215ENST00000544543 KIDINS220Q9ULH0 1771 aa21.36■■□□□ 1.01
ACSF3-215ENST00000544543 EHBP1L1Q8N3D4 1523 aa21.36■■□□□ 1.01
ACSF3-215ENST00000544543 TRAPPC8Q9Y2L5 1435 aa21.36■■□□□ 1.01
ACSF3-215ENST00000544543 SYCP2Q9BX26 1530 aa21.35■■□□□ 1.01
ACSF3-215ENST00000544543 GPATCH8Q9UKJ3 1502 aaKnown RBP21.35■■□□□ 1.01
ACSF3-215ENST00000544543 LMTK3Q96Q04 1460 aa21.35■■□□□ 1.01
ACSF3-215ENST00000544543 MLH3Q9UHC1 1453 aa21.35■■□□□ 1.01
ACSF3-215ENST00000544543 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
ACSF3-215ENST00000544543 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
ACSF3-215ENST00000544543 AFAP1Q8N556 730 aa21.29■■□□□ 1
ACSF3-215ENST00000544543 AGLP35573 1532 aa21.28■■□□□ 1
ACSF3-215ENST00000544543 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
ACSF3-215ENST00000544543 PREX1Q8TCU6 1659 aa21.24■□□□□ 0.99
ACSF3-215ENST00000544543 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
ACSF3-215ENST00000544543 PLXNC1O60486 1568 aa21.23■□□□□ 0.99
ACSF3-215ENST00000544543 PLEKHH2Q8IVE3 1493 aa21.22■□□□□ 0.99
ACSF3-215ENST00000544543 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
ACSF3-215ENST00000544543 C3P01024 1663 aa21.21■□□□□ 0.99
ACSF3-215ENST00000544543 KIAA1107Q9UPP5 1409 aa21.21■□□□□ 0.99
ACSF3-215ENST00000544543 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
ACSF3-215ENST00000544543 MLECQ14165 292 aa21.2■□□□□ 0.98
ACSF3-215ENST00000544543 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
ACSF3-215ENST00000544543 NCOA2Q15596 1464 aa21.17■□□□□ 0.98
ACSF3-215ENST00000544543 ADGBQ8N7X0 1667 aa21.15■□□□□ 0.98
ACSF3-215ENST00000544543 MROH2AA6NES4 1674 aa21.15■□□□□ 0.98
ACSF3-215ENST00000544543 MBD5Q9P267 1494 aa21.14■□□□□ 0.98
ACSF3-215ENST00000544543 ZNF777Q9ULD5 760 aaPredicted RBP21.13■□□□□ 0.97
ACSF3-215ENST00000544543 LOC105371045A0A1W2PR82 267 aa21.12■□□□□ 0.97
ACSF3-215ENST00000544543 CFDP1Q9UEE9 299 aaPredicted RBP21.12■□□□□ 0.97
ACSF3-215ENST00000544543 CAMSAP2Q08AD1 1489 aa21.11■□□□□ 0.97
ACSF3-215ENST00000544543 MYT1LQ9UL68 1186 aa21.1■□□□□ 0.97
ACSF3-215ENST00000544543 LRRC9Q6ZRR7 1453 aa21.09■□□□□ 0.97
ACSF3-215ENST00000544543 HNRNPMP52272 730 aaKnown RBP eCLIP21.09■□□□□ 0.971e-9■■■■■ 27.6
ACSF3-215ENST00000544543 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
ACSF3-215ENST00000544543 MAP3K1Q13233 1512 aa21.09■□□□□ 0.97
ACSF3-215ENST00000544543 SPAG9O60271 1321 aaKnown RBP21.08■□□□□ 0.97
ACSF3-215ENST00000544543 A2MP01023 1474 aa21.08■□□□□ 0.97
ACSF3-215ENST00000544543 CLTCQ00610 1675 aaKnown RBP21.07■□□□□ 0.96
ACSF3-215ENST00000544543 ZNF644Q9H582 1327 aaPredicted RBP21.06■□□□□ 0.96
ACSF3-215ENST00000544543 CCDC141Q6ZP82 1450 aa21.06■□□□□ 0.96
ACSF3-215ENST00000544543 ARHGEF5Q12774 1597 aa21.06■□□□□ 0.96
ACSF3-215ENST00000544543 CNTLNQ9NXG0 1405 aa21.05■□□□□ 0.96
ACSF3-215ENST00000544543 HSPA2P54652 639 aa21.05■□□□□ 0.96
ACSF3-215ENST00000544543 CEBPAP49715 358 aaPredicted RBP21.04■□□□□ 0.96
ACSF3-215ENST00000544543 ILDR1Q86SU0 546 aaPredicted RBP21.04■□□□□ 0.96
ACSF3-215ENST00000544543 STRCQ7RTU9 1775 aa21.04■□□□□ 0.96
ACSF3-215ENST00000544543 RTEL1-TNFRSF6BF6WH68 1400 aa21.02■□□□□ 0.96
ACSF3-215ENST00000544543 UHRF1BP1Q6BDS2 1440 aa21.02■□□□□ 0.96
ACSF3-215ENST00000544543 SETD1BQ9UPS6 1966 aaKnown RBP21.01■□□□□ 0.95
ACSF3-215ENST00000544543 MYO3AQ8NEV4 1616 aa21■□□□□ 0.95
ACSF3-215ENST00000544543 ZNF142P52746 1687 aaPredicted RBP20.99■□□□□ 0.95
ACSF3-215ENST00000544543 MAST1Q9Y2H9 1570 aa20.98■□□□□ 0.95
ACSF3-215ENST00000544543 NPATQ14207 1427 aa20.96■□□□□ 0.95
ACSF3-215ENST00000544543 CROCC2H7BZ55 1655 aa20.95■□□□□ 0.94
ACSF3-215ENST00000544543 FAM135AQ9P2D6 1515 aa20.94■□□□□ 0.94
ACSF3-215ENST00000544543 MYOM3Q5VTT5 1437 aa20.93■□□□□ 0.94
ACSF3-215ENST00000544543 KANK4Q5T7N3 995 aaPredicted RBP20.91■□□□□ 0.94
ACSF3-215ENST00000544543 RNF17Q9BXT8 1623 aaKnown RBP20.91■□□□□ 0.94
ACSF3-215ENST00000544543 KDM5DQ9BY66 1539 aa20.9■□□□□ 0.94
ACSF3-215ENST00000544543 CEP170BQ9Y4F5 1589 aaPredicted RBP20.89■□□□□ 0.94
ACSF3-215ENST00000544543 PTPRKQ15262 1439 aa20.89■□□□□ 0.94
ACSF3-215ENST00000544543 MIA2Q96PC5 1412 aa20.89■□□□□ 0.94
ACSF3-215ENST00000544543 ZMYM3Q14202 1370 aa20.89■□□□□ 0.93
ACSF3-215ENST00000544543 DHX29Q7Z478 1369 aaKnown RBP20.89■□□□□ 0.93
ACSF3-215ENST00000544543 EIF2AK4Q9P2K8 1649 aaKnown RBP20.89■□□□□ 0.93
ACSF3-215ENST00000544543 ESF1Q9H501 851 aaKnown RBP20.88■□□□□ 0.93
ACSF3-215ENST00000544543 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
ACSF3-215ENST00000544543 MROH1Q8NDA8 1641 aa20.86■□□□□ 0.93
ACSF3-215ENST00000544543 CAMSAP1Q5T5Y3 1602 aa20.86■□□□□ 0.93
ACSF3-215ENST00000544543 PTPN23Q9H3S7 1636 aa20.86■□□□□ 0.93
ACSF3-215ENST00000544543 ZC3H13Q5T200 1668 aaKnown RBP20.85■□□□□ 0.93
ACSF3-215ENST00000544543 SHANK2Q9UPX8 1470 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms