RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 CDC42BPBQ9Y5S2 1711 aa25.27■■□□□ 1.64
LDHB-210ENST00000544151 ARHGAP5Q13017 1502 aa25.27■■□□□ 1.64
LDHB-210ENST00000544151 ZMYM4Q5VZL5 1548 aa25.27■■□□□ 1.64
LDHB-210ENST00000544151 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
LDHB-210ENST00000544151 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
LDHB-210ENST00000544151 POGZQ7Z3K3 1410 aa25.22■■□□□ 1.63
LDHB-210ENST00000544151 ZFYVE16Q7Z3T8 1539 aa25.21■■□□□ 1.63
LDHB-210ENST00000544151 SCAPERQ9BY12 1400 aa25.2■■□□□ 1.63
LDHB-210ENST00000544151 BCORL1Q5H9F3 1711 aa25.18■■□□□ 1.62
LDHB-210ENST00000544151 EFCAB2Q5VUJ9 269 aa25.18■■□□□ 1.62
LDHB-210ENST00000544151 ADAMTSL3P82987 1691 aa25.16■■□□□ 1.62
LDHB-210ENST00000544151 SIGLEC1Q9BZZ2 1709 aa25.14■■□□□ 1.61
LDHB-210ENST00000544151 MAGI2Q86UL8 1455 aa25.14■■□□□ 1.61
LDHB-210ENST00000544151 ITSN2Q9NZM3 1697 aa25.13■■□□□ 1.61
LDHB-210ENST00000544151 YEATS2Q9ULM3 1422 aa25.13■■□□□ 1.61
LDHB-210ENST00000544151 ABCC1P33527 1531 aa25.12■■□□□ 1.61
LDHB-210ENST00000544151 ZNF518AQ6AHZ1 1483 aa25.12■■□□□ 1.61
LDHB-210ENST00000544151 KDM5CP41229 1560 aa25.11■■□□□ 1.61
LDHB-210ENST00000544151 MADDQ8WXG6 1647 aa25.11■■□□□ 1.61
LDHB-210ENST00000544151 EHBP1L1Q8N3D4 1523 aa25.1■■□□□ 1.61
LDHB-210ENST00000544151 ARID4BQ4LE39 1312 aaPredicted RBP25.1■■□□□ 1.61
LDHB-210ENST00000544151 HECW2Q9P2P5 1572 aa25.1■■□□□ 1.61
LDHB-210ENST00000544151 MTUS2Q5JR59 1369 aa25.08■■□□□ 1.61
LDHB-210ENST00000544151 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.61
LDHB-210ENST00000544151 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
LDHB-210ENST00000544151 RIMS1Q86UR5 1692 aaKnown RBP25.05■■□□□ 1.6
LDHB-210ENST00000544151 GPATCH8Q9UKJ3 1502 aaKnown RBP25.03■■□□□ 1.6
LDHB-210ENST00000544151 ARHGEF12Q9NZN5 1544 aa25.02■■□□□ 1.6
LDHB-210ENST00000544151 TIAM1Q13009 1591 aa25.01■■□□□ 1.59
LDHB-210ENST00000544151 C9orf84Q5VXU9 1444 aa25.01■■□□□ 1.59
LDHB-210ENST00000544151 PTPRMP28827 1452 aa25.01■■□□□ 1.59
LDHB-210ENST00000544151 SYCP2Q9BX26 1530 aa25.01■■□□□ 1.59
LDHB-210ENST00000544151 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
LDHB-210ENST00000544151 ABCA6Q8N139 1617 aa25.01■■□□□ 1.59
LDHB-210ENST00000544151 FER1L4A9Z1Z3 1794 aa25■■□□□ 1.59
LDHB-210ENST00000544151 VPS8Q8N3P4 1428 aa25■■□□□ 1.59
LDHB-210ENST00000544151 ATP10AO60312 1499 aa24.99■■□□□ 1.59
LDHB-210ENST00000544151 TRAPPC8Q9Y2L5 1435 aa24.99■■□□□ 1.59
LDHB-210ENST00000544151 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
LDHB-210ENST00000544151 AFAP1Q8N556 730 aa24.98■■□□□ 1.59
LDHB-210ENST00000544151 SUPT6HQ7KZ85 1726 aaKnown RBP24.98■■□□□ 1.59
LDHB-210ENST00000544151 MYT1LQ9UL68 1186 aa24.95■■□□□ 1.58
LDHB-210ENST00000544151 ZNF777Q9ULD5 760 aaPredicted RBP24.95■■□□□ 1.58
LDHB-210ENST00000544151 KIDINS220Q9ULH0 1771 aa24.95■■□□□ 1.58
LDHB-210ENST00000544151 MLH3Q9UHC1 1453 aa24.95■■□□□ 1.58
LDHB-210ENST00000544151 REREQ9P2R6 1566 aa24.93■■□□□ 1.58
LDHB-210ENST00000544151 PLEKHH2Q8IVE3 1493 aa24.9■■□□□ 1.58
LDHB-210ENST00000544151 CFDP1Q9UEE9 299 aaPredicted RBP24.9■■□□□ 1.58
LDHB-210ENST00000544151 MLECQ14165 292 aa24.89■■□□□ 1.58
LDHB-210ENST00000544151 NCOA2Q15596 1464 aa24.88■■□□□ 1.57
LDHB-210ENST00000544151 INO80Q9ULG1 1556 aaPredicted RBP24.87■■□□□ 1.57
LDHB-210ENST00000544151 FOXD1Q16676 465 aa24.86■■□□□ 1.57
LDHB-210ENST00000544151 KIAA1107Q9UPP5 1409 aa24.86■■□□□ 1.57
LDHB-210ENST00000544151 ATP7AQ04656 1500 aa24.85■■□□□ 1.57
LDHB-210ENST00000544151 LRRC9Q6ZRR7 1453 aa24.83■■□□□ 1.57
LDHB-210ENST00000544151 HNRNPMP52272 730 aaKnown RBP eCLIP24.82■■□□□ 1.56
LDHB-210ENST00000544151 AGLP35573 1532 aa24.81■■□□□ 1.56
LDHB-210ENST00000544151 MAP3K1Q13233 1512 aa24.81■■□□□ 1.56
LDHB-210ENST00000544151 CAMSAP2Q08AD1 1489 aa24.78■■□□□ 1.56
LDHB-210ENST00000544151 SPAG9O60271 1321 aaKnown RBP24.78■■□□□ 1.56
LDHB-210ENST00000544151 ZNF644Q9H582 1327 aaPredicted RBP24.77■■□□□ 1.56
LDHB-210ENST00000544151 ADGBQ8N7X0 1667 aa24.75■■□□□ 1.55
LDHB-210ENST00000544151 LMTK3Q96Q04 1460 aa24.75■■□□□ 1.55
LDHB-210ENST00000544151 MBD5Q9P267 1494 aa24.75■■□□□ 1.55
LDHB-210ENST00000544151 PLXNC1O60486 1568 aa24.75■■□□□ 1.55
LDHB-210ENST00000544151 CCDC141Q6ZP82 1450 aa24.71■■□□□ 1.55
LDHB-210ENST00000544151 C3P01024 1663 aa24.71■■□□□ 1.55
LDHB-210ENST00000544151 PREX1Q8TCU6 1659 aa24.7■■□□□ 1.54
LDHB-210ENST00000544151 KANK4Q5T7N3 995 aaPredicted RBP24.69■■□□□ 1.54
LDHB-210ENST00000544151 A2MP01023 1474 aa24.69■■□□□ 1.54
LDHB-210ENST00000544151 ARHGEF5Q12774 1597 aa24.67■■□□□ 1.54
LDHB-210ENST00000544151 RTEL1-TNFRSF6BF6WH68 1400 aa24.64■■□□□ 1.54
LDHB-210ENST00000544151 MYOM3Q5VTT5 1437 aa24.64■■□□□ 1.54
LDHB-210ENST00000544151 MROH2AA6NES4 1674 aa24.64■■□□□ 1.53
LDHB-210ENST00000544151 APLP2Q06481 763 aa24.63■■□□□ 1.53
LDHB-210ENST00000544151 CLTCQ00610 1675 aaKnown RBP24.62■■□□□ 1.53
LDHB-210ENST00000544151 ESF1Q9H501 851 aaKnown RBP24.62■■□□□ 1.53
LDHB-210ENST00000544151 CEBPAP49715 358 aaPredicted RBP24.61■■□□□ 1.53
LDHB-210ENST00000544151 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
LDHB-210ENST00000544151 MIA2Q96PC5 1412 aa24.59■■□□□ 1.53
LDHB-210ENST00000544151 SETD1BQ9UPS6 1966 aaKnown RBP24.58■■□□□ 1.52
LDHB-210ENST00000544151 MAST1Q9Y2H9 1570 aa24.56■■□□□ 1.52
LDHB-210ENST00000544151 RSPH4AQ5TD94 716 aa24.55■■□□□ 1.52
LDHB-210ENST00000544151 CROCC2H7BZ55 1655 aa24.55■■□□□ 1.52
LDHB-210ENST00000544151 PTPN23Q9H3S7 1636 aa24.54■■□□□ 1.52
LDHB-210ENST00000544151 HSPA2P54652 639 aa24.54■■□□□ 1.52
LDHB-210ENST00000544151 UHRF1BP1Q6BDS2 1440 aa24.53■■□□□ 1.52
LDHB-210ENST00000544151 DHX29Q7Z478 1369 aaKnown RBP24.52■■□□□ 1.52
LDHB-210ENST00000544151 GGT6Q6P531 493 aa24.5■■□□□ 1.51
LDHB-210ENST00000544151 TSPY4P0CV99 314 aa24.48■■□□□ 1.51
LDHB-210ENST00000544151 TSPY10P0CW01 314 aa24.48■■□□□ 1.51
LDHB-210ENST00000544151 FGD6Q6ZV73 1430 aa24.45■■□□□ 1.51
LDHB-210ENST00000544151 ZMYM3Q14202 1370 aa24.45■■□□□ 1.5
LDHB-210ENST00000544151 DNMT1P26358 1616 aaKnown RBP24.45■■□□□ 1.5
LDHB-210ENST00000544151 MYO3AQ8NEV4 1616 aa24.45■■□□□ 1.5
LDHB-210ENST00000544151 KDM5DQ9BY66 1539 aa24.45■■□□□ 1.5
LDHB-210ENST00000544151 NPATQ14207 1427 aa24.44■■□□□ 1.5
LDHB-210ENST00000544151 EIF2AK4Q9P2K8 1649 aaKnown RBP24.44■■□□□ 1.5
LDHB-210ENST00000544151 FAM135AQ9P2D6 1515 aa24.43■■□□□ 1.5
LDHB-210ENST00000544151 SHANK2Q9UPX8 1470 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms