RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 FAM205CA6NFA0 338 aa9.03□□□□□ -0.96
GTF2H3-213ENST00000543415 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
GTF2H3-213ENST00000543415 TMEM92Q6UXU6 159 aa9.03□□□□□ -0.96
GTF2H3-213ENST00000543415 HS3ST6Q96QI5 342 aa9.02□□□□□ -0.97
GTF2H3-213ENST00000543415 ZSWIM6Q9HCJ5 1215 aa9.02□□□□□ -0.97
GTF2H3-213ENST00000543415 POTEB3A0JP26 581 aa8.96□□□□□ -0.98
GTF2H3-213ENST00000543415 POTEBQ6S5H4 581 aa8.96□□□□□ -0.98
GTF2H3-213ENST00000543415 SPNS2Q8IVW8 549 aa8.96□□□□□ -0.98
GTF2H3-213ENST00000543415 ERBB3P21860 1342 aa8.96□□□□□ -0.98
GTF2H3-213ENST00000543415 SLC24A1O60721 1099 aa8.95□□□□□ -0.98
GTF2H3-213ENST00000543415 GPR153Q6NV75 609 aa8.93□□□□□ -0.98
GTF2H3-213ENST00000543415 HS6ST3Q8IZP7 471 aa8.93□□□□□ -0.98
GTF2H3-213ENST00000543415 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
GTF2H3-213ENST00000543415 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
GTF2H3-213ENST00000543415 KIF3CO14782 793 aa8.91□□□□□ -0.98
GTF2H3-213ENST00000543415 MMRN1Q13201 1228 aa8.91□□□□□ -0.98
GTF2H3-213ENST00000543415 C2orf72A6NCS6 295 aa8.9□□□□□ -0.98
GTF2H3-213ENST00000543415 VARS2Q5ST30 1063 aaKnown RBP8.89□□□□□ -0.99
GTF2H3-213ENST00000543415 TMC2Q8TDI7 906 aa8.89□□□□□ -0.99
GTF2H3-213ENST00000543415 CHGAP10645 457 aaKnown RBP8.87□□□□□ -0.99
GTF2H3-213ENST00000543415 ARSIQ5FYB1 569 aa8.87□□□□□ -0.99
GTF2H3-213ENST00000543415 PPP1R37O75864 691 aa8.86□□□□□ -0.99
GTF2H3-213ENST00000543415 SLC34A2O95436 690 aa8.85□□□□□ -0.99
GTF2H3-213ENST00000543415 ZNF687Q8N1G0 1237 aa8.85□□□□□ -0.99
GTF2H3-213ENST00000543415 RYDENQ9NUL5 291 aaKnown RBP8.84□□□□□ -0.99
GTF2H3-213ENST00000543415 DCAF8L2P0C7V8 631 aa8.83□□□□□ -1
GTF2H3-213ENST00000543415 DNAJC5Q9H3Z4 198 aa8.83□□□□□ -1
GTF2H3-213ENST00000543415 ZNF316A6NFI3 1004 aaPredicted RBP8.82□□□□□ -1
GTF2H3-213ENST00000543415 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
GTF2H3-213ENST00000543415 KHSRPQ92945 711 aaKnown RBP eCLIP8.8□□□□□ -13e-6■■■□□ 18.6
GTF2H3-213ENST00000543415 PCDHGA4Q9Y5G9 962 aa8.79□□□□□ -1
GTF2H3-213ENST00000543415 NUDT7P0C024 238 aa8.77□□□□□ -1.01
GTF2H3-213ENST00000543415 FOXK1P85037 733 aa8.77□□□□□ -1.01
GTF2H3-213ENST00000543415 GPHNQ9NQX3 736 aaPredicted RBP8.77□□□□□ -1.01
GTF2H3-213ENST00000543415 PTGER2P43116 358 aa8.75□□□□□ -1.01
GTF2H3-213ENST00000543415 PBX2P40425 430 aa8.74□□□□□ -1.01
GTF2H3-213ENST00000543415 PLPP6Q8IY26 295 aa8.74□□□□□ -1.01
GTF2H3-213ENST00000543415 PTCD2Q8WV60 388 aaKnown RBP8.74□□□□□ -1.01
GTF2H3-213ENST00000543415 PSDA5PKW4 1024 aaPredicted RBP8.73□□□□□ -1.01
GTF2H3-213ENST00000543415 LHX6Q9UPM6 363 aa8.73□□□□□ -1.01
GTF2H3-213ENST00000543415 TBC1D12O60347 775 aa8.71□□□□□ -1.02
GTF2H3-213ENST00000543415 RNF166Q96A37 237 aaPredicted RBP8.71□□□□□ -1.02
GTF2H3-213ENST00000543415 MYT1LQ9UL68 1186 aa8.71□□□□□ -1.02
GTF2H3-213ENST00000543415 LSM11P83369 360 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF2H3-213ENST00000543415 DSG2Q14126 1118 aa8.7□□□□□ -1.02
GTF2H3-213ENST00000543415 ANKRD13DQ6ZTN6 518 aa8.7□□□□□ -1.02
GTF2H3-213ENST00000543415 GTPBP6O43824 516 aaPredicted RBP8.68□□□□□ -1.02
GTF2H3-213ENST00000543415 KDM4FA0A1W2PPD8 638 aa8.67□□□□□ -1.02
GTF2H3-213ENST00000543415 CRISPLD2Q9H0B8 497 aa8.66□□□□□ -1.02
GTF2H3-213ENST00000543415 PDE4AP27815 886 aa8.65□□□□□ -1.02
GTF2H3-213ENST00000543415 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
GTF2H3-213ENST00000543415 PPP4R3BQ5MIZ7 849 aa8.63□□□□□ -1.03
GTF2H3-213ENST00000543415 PPP1R15BQ5SWA1 713 aa8.63□□□□□ -1.03
GTF2H3-213ENST00000543415 BBXQ8WY36 941 aaPredicted RBP8.63□□□□□ -1.03
GTF2H3-213ENST00000543415 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
GTF2H3-213ENST00000543415 OXER1Q8TDS5 423 aa8.62□□□□□ -1.03
GTF2H3-213ENST00000543415 AXIN2Q9Y2T1 843 aa8.62□□□□□ -1.03
GTF2H3-213ENST00000543415 NCKAP5LQ9HCH0 1330 aa8.59□□□□□ -1.03
GTF2H3-213ENST00000543415 KCNH8Q96L42 1107 aa8.59□□□□□ -1.03
GTF2H3-213ENST00000543415 TK2O00142 265 aa8.58□□□□□ -1.04
GTF2H3-213ENST00000543415 UPF1Q92900 1129 aaKnown RBP eCLIP8.58□□□□□ -1.042e-8■■■□□ 15.9
GTF2H3-213ENST00000543415 ADGRD1Q6QNK2 874 aa8.57□□□□□ -1.04
GTF2H3-213ENST00000543415 DDX27Q96GQ7 796 aaKnown RBP8.57□□□□□ -1.04
GTF2H3-213ENST00000543415 LARP6Q9BRS8 491 aaKnown RBP8.57□□□□□ -1.04
GTF2H3-213ENST00000543415 PSEN2P49810 448 aa8.54□□□□□ -1.04
GTF2H3-213ENST00000543415 MFSD10Q14728 455 aa8.54□□□□□ -1.04
GTF2H3-213ENST00000543415 CADPS2Q86UW7 1296 aa8.53□□□□□ -1.04
GTF2H3-213ENST00000543415 ZNF454Q8N9F8 522 aa8.53□□□□□ -1.04
GTF2H3-213ENST00000543415 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
GTF2H3-213ENST00000543415 ANO8Q9HCE9 1232 aaPredicted RBP8.52□□□□□ -1.05
GTF2H3-213ENST00000543415 PAXIP1Q6ZW49 1069 aaPredicted RBP8.51□□□□□ -1.05
GTF2H3-213ENST00000543415 SPRYD3Q8NCJ5 442 aa8.51□□□□□ -1.05
GTF2H3-213ENST00000543415 STAC3Q96MF2 364 aa8.51□□□□□ -1.05
GTF2H3-213ENST00000543415 KCNK17Q96T54 332 aa8.51□□□□□ -1.05
GTF2H3-213ENST00000543415 BCL2L12Q9HB09 334 aa8.51□□□□□ -1.05
GTF2H3-213ENST00000543415 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.51□□□□□ -1.05
GTF2H3-213ENST00000543415 HRO43593 1189 aa8.5□□□□□ -1.05
GTF2H3-213ENST00000543415 EVI5O60447 810 aa8.5□□□□□ -1.05
GTF2H3-213ENST00000543415 FOSBP53539 338 aa8.5□□□□□ -1.05
GTF2H3-213ENST00000543415 MAP3K9P80192 1104 aa8.5□□□□□ -1.05
GTF2H3-213ENST00000543415 CFAP44Q96MT7 982 aa8.5□□□□□ -1.05
GTF2H3-213ENST00000543415 HCSTQ9UBK5 93 aa8.5□□□□□ -1.05
GTF2H3-213ENST00000543415 JPH4Q96JJ6 628 aa8.49□□□□□ -1.05
GTF2H3-213ENST00000543415 PTPREP23469 700 aa8.47□□□□□ -1.05
GTF2H3-213ENST00000543415 PLCB2Q00722 1185 aa8.47□□□□□ -1.05
GTF2H3-213ENST00000543415 SLC4A5Q9BY07 1137 aa8.47□□□□□ -1.05
GTF2H3-213ENST00000543415 ZDHHC16Q969W1 377 aa8.45□□□□□ -1.06
GTF2H3-213ENST00000543415 EMILIN3Q9NT22 766 aa8.45□□□□□ -1.06
GTF2H3-213ENST00000543415 VPS9D1Q9Y2B5 631 aa8.45□□□□□ -1.06
GTF2H3-213ENST00000543415 HAP1P54257 671 aaPredicted RBP8.42□□□□□ -1.06
GTF2H3-213ENST00000543415 CAMK2BQ13554 666 aa8.41□□□□□ -1.06
GTF2H3-213ENST00000543415 KCTD12Q96CX2 325 aaKnown RBP8.41□□□□□ -1.06
GTF2H3-213ENST00000543415 ADAM33Q9BZ11 813 aa8.41□□□□□ -1.06
GTF2H3-213ENST00000543415 FBXW7Q969H0 707 aa8.4□□□□□ -1.06
GTF2H3-213ENST00000543415 ZBED2Q9BTP6 218 aa8.4□□□□□ -1.06
GTF2H3-213ENST00000543415 PHF14O94880 888 aa8.39□□□□□ -1.07
GTF2H3-213ENST00000543415 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
GTF2H3-213ENST00000543415 PCDHGA10Q9Y5H3 936 aa8.39□□□□□ -1.07
GTF2H3-213ENST00000543415 BHMG1C9JSJ3 638 aaPredicted RBP8.38□□□□□ -1.07
GTF2H3-213ENST00000543415 TYW1BQ6NUM6 668 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms