RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 MFSD10Q14728 455 aa10.38□□□□□ -0.75
C2CD3-218ENST00000542484 BCANQ96GW7 911 aa10.38□□□□□ -0.75
C2CD3-218ENST00000542484 P3H3Q8IVL6 736 aa10.36□□□□□ -0.75
C2CD3-218ENST00000542484 LARP6Q9BRS8 491 aaKnown RBP10.36□□□□□ -0.75
C2CD3-218ENST00000542484 GPHNQ9NQX3 736 aaPredicted RBP10.35□□□□□ -0.75
C2CD3-218ENST00000542484 DDX27Q96GQ7 796 aaKnown RBP10.33□□□□□ -0.76
C2CD3-218ENST00000542484 KCNV2Q8TDN2 545 aa10.32□□□□□ -0.76
C2CD3-218ENST00000542484 KIF3CO14782 793 aa10.31□□□□□ -0.76
C2CD3-218ENST00000542484 E2F4Q16254 413 aa10.31□□□□□ -0.76
C2CD3-218ENST00000542484 TMC2Q8TDI7 906 aa10.31□□□□□ -0.76
C2CD3-218ENST00000542484 PPP1R15BQ5SWA1 713 aa10.29□□□□□ -0.76
C2CD3-218ENST00000542484 C2orf72A6NCS6 295 aa10.28□□□□□ -0.76
C2CD3-218ENST00000542484 FOXK1P85037 733 aa10.28□□□□□ -0.76
C2CD3-218ENST00000542484 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
C2CD3-218ENST00000542484 DSG2Q14126 1118 aa10.27□□□□□ -0.77
C2CD3-218ENST00000542484 NBR1Q14596 966 aa10.27□□□□□ -0.77
C2CD3-218ENST00000542484 TMEM92Q6UXU6 159 aa10.27□□□□□ -0.77
C2CD3-218ENST00000542484 C3orf67Q6ZVT6 689 aa10.27□□□□□ -0.77
C2CD3-218ENST00000542484 ARHGEF1Q92888 912 aaKnown RBP10.25□□□□□ -0.77
C2CD3-218ENST00000542484 ARIH1Q9Y4X5 557 aaPredicted RBP10.24□□□□□ -0.77
C2CD3-218ENST00000542484 PLPP6Q8IY26 295 aa10.21□□□□□ -0.77
C2CD3-218ENST00000542484 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.21□□□□□ -0.77
C2CD3-218ENST00000542484 POTEB2H3BUK9 544 aa10.2□□□□□ -0.78
C2CD3-218ENST00000542484 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
C2CD3-218ENST00000542484 EMILIN3Q9NT22 766 aa10.16□□□□□ -0.78
C2CD3-218ENST00000542484 MAMSTRQ6ZN01 415 aa10.13□□□□□ -0.79
C2CD3-218ENST00000542484 SCUBE2Q9NQ36 999 aa10.12□□□□□ -0.79
C2CD3-218ENST00000542484 DPYSL4O14531 572 aa10.11□□□□□ -0.79
C2CD3-218ENST00000542484 OXER1Q8TDS5 423 aa10.1□□□□□ -0.79
C2CD3-218ENST00000542484 SLC34A2O95436 690 aa10.09□□□□□ -0.79
C2CD3-218ENST00000542484 PDIA6Q15084 440 aa10.09□□□□□ -0.79
C2CD3-218ENST00000542484 TESPA1A2RU30 521 aaPredicted RBP10.08□□□□□ -0.8
C2CD3-218ENST00000542484 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
C2CD3-218ENST00000542484 SEMA3EO15041 775 aa10.08□□□□□ -0.8
C2CD3-218ENST00000542484 PTCD2Q8WV60 388 aaKnown RBP10.07□□□□□ -0.8
C2CD3-218ENST00000542484 SLAIN1Q8ND83 568 aa10.06□□□□□ -0.8
C2CD3-218ENST00000542484 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
C2CD3-218ENST00000542484 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
C2CD3-218ENST00000542484 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.81
C2CD3-218ENST00000542484 TBC1D12O60347 775 aa10.01□□□□□ -0.81
C2CD3-218ENST00000542484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.01□□□□□ -0.81
C2CD3-218ENST00000542484 LHX8Q68G74 356 aa10□□□□□ -0.81
C2CD3-218ENST00000542484 SMYD5Q6GMV2 418 aa10□□□□□ -0.81
C2CD3-218ENST00000542484 OTUD5Q96G74 571 aa10□□□□□ -0.81
C2CD3-218ENST00000542484 HOXB3P14651 431 aaPredicted RBP9.99□□□□□ -0.81
C2CD3-218ENST00000542484 DOK7Q18PE1 504 aa9.99□□□□□ -0.81
C2CD3-218ENST00000542484 LMOD2Q6P5Q4 547 aa9.99□□□□□ -0.81
C2CD3-218ENST00000542484 PCDHGA4Q9Y5G9 962 aa9.99□□□□□ -0.81
C2CD3-218ENST00000542484 MLLT3P42568 568 aaPredicted RBP9.98□□□□□ -0.81
C2CD3-218ENST00000542484 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
C2CD3-218ENST00000542484 EVI5O60447 810 aa9.97□□□□□ -0.81
C2CD3-218ENST00000542484 PTGER2P43116 358 aa9.97□□□□□ -0.81
C2CD3-218ENST00000542484 TPRNQ4KMQ1 711 aa9.97□□□□□ -0.81
C2CD3-218ENST00000542484 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
C2CD3-218ENST00000542484 RIMBP2O15034 1052 aa9.95□□□□□ -0.82
C2CD3-218ENST00000542484 ANO8Q9HCE9 1232 aaPredicted RBP9.95□□□□□ -0.82
C2CD3-218ENST00000542484 KDM4FA0A1W2PPD8 638 aa9.94□□□□□ -0.82
C2CD3-218ENST00000542484 SNPHO15079 494 aa9.93□□□□□ -0.82
C2CD3-218ENST00000542484 PRKCSHP14314 528 aaPredicted RBP9.93□□□□□ -0.82
C2CD3-218ENST00000542484 GPR153Q6NV75 609 aa9.91□□□□□ -0.82
C2CD3-218ENST00000542484 ZNF710Q8N1W2 664 aa9.9□□□□□ -0.82
C2CD3-218ENST00000542484 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
C2CD3-218ENST00000542484 ARSIQ5FYB1 569 aa9.89□□□□□ -0.83
C2CD3-218ENST00000542484 DDX12PQ92771 950 aa9.89□□□□□ -0.83
C2CD3-218ENST00000542484 OSBPP22059 807 aa9.88□□□□□ -0.83
C2CD3-218ENST00000542484 RBM26Q5T8P6 1007 aaKnown RBP9.88□□□□□ -0.83
C2CD3-218ENST00000542484 NUDT7P0C024 238 aa9.86□□□□□ -0.83
C2CD3-218ENST00000542484 KHSRPQ92945 711 aaKnown RBP eCLIP9.86□□□□□ -0.83
C2CD3-218ENST00000542484 PHF14O94880 888 aa9.85□□□□□ -0.83
C2CD3-218ENST00000542484 ZC3H15Q8WU90 426 aaKnown RBP9.85□□□□□ -0.83
C2CD3-218ENST00000542484 JPH4Q96JJ6 628 aa9.85□□□□□ -0.83
C2CD3-218ENST00000542484 EPAS1Q99814 870 aa9.85□□□□□ -0.83
C2CD3-218ENST00000542484 HOXB1P14653 301 aaPredicted RBP9.84□□□□□ -0.83
C2CD3-218ENST00000542484 GPIHBP1Q8IV16 184 aa9.84□□□□□ -0.83
C2CD3-218ENST00000542484 PCDHGA10Q9Y5H3 936 aa9.83□□□□□ -0.84
C2CD3-218ENST00000542484 PRIM1P49642 420 aaKnown RBP9.82□□□□□ -0.84
C2CD3-218ENST00000542484 FOSBP53539 338 aa9.82□□□□□ -0.84
C2CD3-218ENST00000542484 TYW1BQ6NUM6 668 aa9.81□□□□□ -0.84
C2CD3-218ENST00000542484 GPR37O15354 613 aa9.8□□□□□ -0.84
C2CD3-218ENST00000542484 EN1Q05925 392 aaPredicted RBP9.8□□□□□ -0.84
C2CD3-218ENST00000542484 FBXW7Q969H0 707 aa9.8□□□□□ -0.84
C2CD3-218ENST00000542484 ZMYND10O75800 440 aa9.79□□□□□ -0.84
C2CD3-218ENST00000542484 LHX6Q9UPM6 363 aa9.79□□□□□ -0.84
C2CD3-218ENST00000542484 PSDA5PKW4 1024 aaPredicted RBP9.78□□□□□ -0.84
C2CD3-218ENST00000542484 ZNF454Q8N9F8 522 aa9.78□□□□□ -0.84
C2CD3-218ENST00000542484 NUTM2FA1L443 756 aa9.77□□□□□ -0.85
C2CD3-218ENST00000542484 ZDHHC16Q969W1 377 aa9.76□□□□□ -0.85
C2CD3-218ENST00000542484 MAP3K7O43318 606 aa9.75□□□□□ -0.85
C2CD3-218ENST00000542484 BARGINQ6ZT62 677 aa9.75□□□□□ -0.85
C2CD3-218ENST00000542484 FCHSD2O94868 740 aa9.74□□□□□ -0.85
C2CD3-218ENST00000542484 PTGDRQ13258 359 aa9.74□□□□□ -0.85
C2CD3-218ENST00000542484 PPP4R3BQ5MIZ7 849 aa9.74□□□□□ -0.85
C2CD3-218ENST00000542484 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
C2CD3-218ENST00000542484 ST18O60284 1047 aa9.73□□□□□ -0.85
C2CD3-218ENST00000542484 HIC1Q14526 733 aa9.72□□□□□ -0.85
C2CD3-218ENST00000542484 TSR1Q2NL82 804 aaKnown RBP9.72□□□□□ -0.85
C2CD3-218ENST00000542484 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
C2CD3-218ENST00000542484 CDHR5Q9HBB8 845 aa9.72□□□□□ -0.85
C2CD3-218ENST00000542484 NPDC1Q9NQX5 325 aaPredicted RBP9.71□□□□□ -0.86
C2CD3-218ENST00000542484 GNPATO15228 680 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms