RNA–Protein interactions for RNA: ENST00000542443.5

TRDN-204, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-204ENST00000542443 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
TRDN-204ENST00000542443 EMP3P54852 163 aa13.09□□□□□ -0.31
TRDN-204ENST00000542443 DCAF8L2P0C7V8 631 aa13.08□□□□□ -0.32
TRDN-204ENST00000542443 PPP1R37O75864 691 aa13.07□□□□□ -0.32
TRDN-204ENST00000542443 RIMBP2O15034 1052 aa13.04□□□□□ -0.32
TRDN-204ENST00000542443 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
TRDN-204ENST00000542443 C2orf72A6NCS6 295 aa13□□□□□ -0.33
TRDN-204ENST00000542443 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
TRDN-204ENST00000542443 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
TRDN-204ENST00000542443 TMC2Q8TDI7 906 aa12.98□□□□□ -0.33
TRDN-204ENST00000542443 HS3ST6Q96QI5 342 aa12.97□□□□□ -0.33
TRDN-204ENST00000542443 KIF3CO14782 793 aa12.96□□□□□ -0.33
TRDN-204ENST00000542443 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
TRDN-204ENST00000542443 POTEB3A0JP26 581 aa12.94□□□□□ -0.34
TRDN-204ENST00000542443 POTEBQ6S5H4 581 aa12.94□□□□□ -0.34
TRDN-204ENST00000542443 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
TRDN-204ENST00000542443 ERBB3P21860 1342 aa12.92□□□□□ -0.34
TRDN-204ENST00000542443 ARSIQ5FYB1 569 aa12.91□□□□□ -0.34
TRDN-204ENST00000542443 RYDENQ9NUL5 291 aaKnown RBP12.91□□□□□ -0.34
TRDN-204ENST00000542443 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
TRDN-204ENST00000542443 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRDN-204ENST00000542443 VARS2Q5ST30 1063 aaKnown RBP12.86□□□□□ -0.35
TRDN-204ENST00000542443 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
TRDN-204ENST00000542443 KRTAP3-3Q9BYR6 98 aa12.8□□□□□ -0.36
TRDN-204ENST00000542443 KRTAP3-2Q9BYR7 98 aa12.8□□□□□ -0.36
TRDN-204ENST00000542443 GPHNQ9NQX3 736 aaPredicted RBP12.8□□□□□ -0.36
TRDN-204ENST00000542443 PLPP6Q8IY26 295 aa12.79□□□□□ -0.36
TRDN-204ENST00000542443 SLC34A2O95436 690 aa12.78□□□□□ -0.36
TRDN-204ENST00000542443 NUDT7P0C024 238 aa12.78□□□□□ -0.36
TRDN-204ENST00000542443 PCDHGA4Q9Y5G9 962 aa12.78□□□□□ -0.36
TRDN-204ENST00000542443 FOXK1P85037 733 aa12.77□□□□□ -0.37
TRDN-204ENST00000542443 DSG2Q14126 1118 aa12.77□□□□□ -0.37
TRDN-204ENST00000542443 SPNS2Q8IVW8 549 aa12.77□□□□□ -0.37
TRDN-204ENST00000542443 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
TRDN-204ENST00000542443 ZNF687Q8N1G0 1237 aa12.72□□□□□ -0.37
TRDN-204ENST00000542443 CRISPLD2Q9H0B8 497 aa12.71□□□□□ -0.37
TRDN-204ENST00000542443 LHX6Q9UPM6 363 aa12.7□□□□□ -0.38
TRDN-204ENST00000542443 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
TRDN-204ENST00000542443 PDE4AP27815 886 aa12.68□□□□□ -0.38
TRDN-204ENST00000542443 PTCD2Q8WV60 388 aaKnown RBP12.68□□□□□ -0.38
TRDN-204ENST00000542443 NCKAP5LQ9HCH0 1330 aa12.67□□□□□ -0.38
TRDN-204ENST00000542443 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
TRDN-204ENST00000542443 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
TRDN-204ENST00000542443 TBC1D12O60347 775 aa12.64□□□□□ -0.39
TRDN-204ENST00000542443 UPF1Q92900 1129 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRDN-204ENST00000542443 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
TRDN-204ENST00000542443 SLC24A1O60721 1099 aa12.6□□□□□ -0.39
TRDN-204ENST00000542443 CADPS2Q86UW7 1296 aa12.59□□□□□ -0.39
TRDN-204ENST00000542443 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
TRDN-204ENST00000542443 KDM4FA0A1W2PPD8 638 aa12.58□□□□□ -0.4
TRDN-204ENST00000542443 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
TRDN-204ENST00000542443 OXER1Q8TDS5 423 aa12.58□□□□□ -0.4
TRDN-204ENST00000542443 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
TRDN-204ENST00000542443 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
TRDN-204ENST00000542443 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
TRDN-204ENST00000542443 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
TRDN-204ENST00000542443 PBX2P40425 430 aa12.53□□□□□ -0.4
TRDN-204ENST00000542443 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRDN-204ENST00000542443 MFSD10Q14728 455 aa12.52□□□□□ -0.41
TRDN-204ENST00000542443 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
TRDN-204ENST00000542443 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
TRDN-204ENST00000542443 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
TRDN-204ENST00000542443 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
TRDN-204ENST00000542443 MYT1LQ9UL68 1186 aa12.48□□□□□ -0.41
TRDN-204ENST00000542443 ARHGAP33O14559 1287 aa12.47□□□□□ -0.41
TRDN-204ENST00000542443 MAP3K9P80192 1104 aa12.47□□□□□ -0.41
TRDN-204ENST00000542443 EVI5O60447 810 aa12.45□□□□□ -0.42
TRDN-204ENST00000542443 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
TRDN-204ENST00000542443 RNF166Q96A37 237 aaPredicted RBP12.45□□□□□ -0.42
TRDN-204ENST00000542443 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
TRDN-204ENST00000542443 PSEN2P49810 448 aa12.44□□□□□ -0.42
TRDN-204ENST00000542443 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
TRDN-204ENST00000542443 PTGER2P43116 358 aa12.42□□□□□ -0.42
TRDN-204ENST00000542443 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
TRDN-204ENST00000542443 KCNK17Q96T54 332 aa12.4□□□□□ -0.42
TRDN-204ENST00000542443 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
TRDN-204ENST00000542443 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
TRDN-204ENST00000542443 FOSBP53539 338 aa12.38□□□□□ -0.43
TRDN-204ENST00000542443 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
TRDN-204ENST00000542443 JPH4Q96JJ6 628 aa12.35□□□□□ -0.43
TRDN-204ENST00000542443 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
TRDN-204ENST00000542443 DPYSL4O14531 572 aa12.33□□□□□ -0.44
TRDN-204ENST00000542443 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
TRDN-204ENST00000542443 TK2O00142 265 aa12.32□□□□□ -0.44
TRDN-204ENST00000542443 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
TRDN-204ENST00000542443 PTPREP23469 700 aa12.3□□□□□ -0.44
TRDN-204ENST00000542443 ADAM33Q9BZ11 813 aa12.3□□□□□ -0.44
TRDN-204ENST00000542443 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
TRDN-204ENST00000542443 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
TRDN-204ENST00000542443 PCDHGA10Q9Y5H3 936 aa12.27□□□□□ -0.45
TRDN-204ENST00000542443 HRO43593 1189 aa12.25□□□□□ -0.45
TRDN-204ENST00000542443 VPS9D1Q9Y2B5 631 aa12.25□□□□□ -0.45
TRDN-204ENST00000542443 E2F4Q16254 413 aa12.23□□□□□ -0.45
TRDN-204ENST00000542443 PHF14O94880 888 aa12.22□□□□□ -0.45
TRDN-204ENST00000542443 TYW1BQ6NUM6 668 aa12.22□□□□□ -0.45
TRDN-204ENST00000542443 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
TRDN-204ENST00000542443 DDX12PQ92771 950 aa12.21□□□□□ -0.45
TRDN-204ENST00000542443 FBXW7Q969H0 707 aa12.2□□□□□ -0.46
TRDN-204ENST00000542443 ZBED2Q9BTP6 218 aa12.2□□□□□ -0.46
TRDN-204ENST00000542443 SLC4A5Q9BY07 1137 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms