RNA–Protein interactions for RNA: ENST00000542436.1

SCNN1A-218, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-218ENST00000542436 RIMS1Q86UR5 1692 aaKnown RBP25.29■■□□□ 1.64
SCNN1A-218ENST00000542436 TROQ12816 1431 aaPredicted RBP25.29■■□□□ 1.64
SCNN1A-218ENST00000542436 SCAPERQ9BY12 1400 aa25.29■■□□□ 1.64
SCNN1A-218ENST00000542436 LRRIQ1Q96JM4 1722 aa25.29■■□□□ 1.64
SCNN1A-218ENST00000542436 EFCAB2Q5VUJ9 269 aa25.26■■□□□ 1.63
SCNN1A-218ENST00000542436 YEATS2Q9ULM3 1422 aa25.26■■□□□ 1.63
SCNN1A-218ENST00000542436 ILDR1Q86SU0 546 aaPredicted RBP25.25■■□□□ 1.63
SCNN1A-218ENST00000542436 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
SCNN1A-218ENST00000542436 PCF11O94913 1555 aaKnown RBP25.24■■□□□ 1.63
SCNN1A-218ENST00000542436 ARHGAP5Q13017 1502 aa25.24■■□□□ 1.63
SCNN1A-218ENST00000542436 ZNF518AQ6AHZ1 1483 aa25.21■■□□□ 1.63
SCNN1A-218ENST00000542436 SIGLEC1Q9BZZ2 1709 aa25.21■■□□□ 1.63
SCNN1A-218ENST00000542436 CASKIN1Q8WXD9 1431 aa25.2■■□□□ 1.63
SCNN1A-218ENST00000542436 FER1L4A9Z1Z3 1794 aa25.19■■□□□ 1.62
SCNN1A-218ENST00000542436 C9orf84Q5VXU9 1444 aa25.18■■□□□ 1.62
SCNN1A-218ENST00000542436 ATP10AO60312 1499 aa25.16■■□□□ 1.62
SCNN1A-218ENST00000542436 PREX2Q70Z35 1606 aa25.16■■□□□ 1.62
SCNN1A-218ENST00000542436 CDC42BPBQ9Y5S2 1711 aa25.16■■□□□ 1.62
SCNN1A-218ENST00000542436 LMTK3Q96Q04 1460 aa25.15■■□□□ 1.62
SCNN1A-218ENST00000542436 FYCO1Q9BQS8 1478 aa25.15■■□□□ 1.62
SCNN1A-218ENST00000542436 KDM5CP41229 1560 aa25.15■■□□□ 1.62
SCNN1A-218ENST00000542436 ARHGEF12Q9NZN5 1544 aa25.09■■□□□ 1.61
SCNN1A-218ENST00000542436 MLECQ14165 292 aa25.09■■□□□ 1.61
SCNN1A-218ENST00000542436 ABCC1P33527 1531 aa25.08■■□□□ 1.61
SCNN1A-218ENST00000542436 CDC42BPAQ5VT25 1732 aa25.07■■□□□ 1.6
SCNN1A-218ENST00000542436 ITSN2Q9NZM3 1697 aa25.07■■□□□ 1.6
SCNN1A-218ENST00000542436 REREQ9P2R6 1566 aa25.06■■□□□ 1.6
SCNN1A-218ENST00000542436 PLPPR3Q6T4P5 718 aa25.06■■□□□ 1.6
SCNN1A-218ENST00000542436 MYT1LQ9UL68 1186 aa25.06■■□□□ 1.6
SCNN1A-218ENST00000542436 DIP2CQ9Y2E4 1556 aa25.05■■□□□ 1.6
SCNN1A-218ENST00000542436 AFAP1Q8N556 730 aa25.04■■□□□ 1.6
SCNN1A-218ENST00000542436 MLH3Q9UHC1 1453 aa25.03■■□□□ 1.6
SCNN1A-218ENST00000542436 ABCA6Q8N139 1617 aa25.02■■□□□ 1.6
SCNN1A-218ENST00000542436 PREX1Q8TCU6 1659 aa24.99■■□□□ 1.59
SCNN1A-218ENST00000542436 TRAPPC8Q9Y2L5 1435 aa24.97■■□□□ 1.59
SCNN1A-218ENST00000542436 AGLP35573 1532 aa24.95■■□□□ 1.58
SCNN1A-218ENST00000542436 HSPA2P54652 639 aa24.94■■□□□ 1.58
SCNN1A-218ENST00000542436 KIDINS220Q9ULH0 1771 aa24.94■■□□□ 1.58
SCNN1A-218ENST00000542436 SAMD9LQ8IVG5 1584 aa24.93■■□□□ 1.58
SCNN1A-218ENST00000542436 FBXO41Q8TF61 875 aa24.93■■□□□ 1.58
SCNN1A-218ENST00000542436 SYCP2Q9BX26 1530 aa24.91■■□□□ 1.58
SCNN1A-218ENST00000542436 GPATCH8Q9UKJ3 1502 aaKnown RBP24.91■■□□□ 1.58
SCNN1A-218ENST00000542436 ZNF777Q9ULD5 760 aaPredicted RBP24.89■■□□□ 1.58
SCNN1A-218ENST00000542436 ESF1Q9H501 851 aaKnown RBP24.88■■□□□ 1.57
SCNN1A-218ENST00000542436 MTUS2Q5JR59 1369 aa24.88■■□□□ 1.57
SCNN1A-218ENST00000542436 PLEKHH2Q8IVE3 1493 aa24.88■■□□□ 1.57
SCNN1A-218ENST00000542436 C3P01024 1663 aa24.87■■□□□ 1.57
SCNN1A-218ENST00000542436 CEBPAP49715 358 aaPredicted RBP24.86■■□□□ 1.57
SCNN1A-218ENST00000542436 UHRF1BP1Q6BDS2 1440 aa24.86■■□□□ 1.57
SCNN1A-218ENST00000542436 CCNB3Q8WWL7 1395 aa24.85■■□□□ 1.57
SCNN1A-218ENST00000542436 EHBP1L1Q8N3D4 1523 aa24.84■■□□□ 1.57
SCNN1A-218ENST00000542436 KIAA1107Q9UPP5 1409 aa24.84■■□□□ 1.57
SCNN1A-218ENST00000542436 SETD1BQ9UPS6 1966 aaKnown RBP24.83■■□□□ 1.57
SCNN1A-218ENST00000542436 CNTLNQ9NXG0 1405 aa24.82■■□□□ 1.56
SCNN1A-218ENST00000542436 CFDP1Q9UEE9 299 aaPredicted RBP24.82■■□□□ 1.56
SCNN1A-218ENST00000542436 SPAG9O60271 1321 aaKnown RBP24.82■■□□□ 1.56
SCNN1A-218ENST00000542436 ATP7AQ04656 1500 aa24.81■■□□□ 1.56
SCNN1A-218ENST00000542436 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
SCNN1A-218ENST00000542436 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
SCNN1A-218ENST00000542436 MROH2AA6NES4 1674 aa24.79■■□□□ 1.56
SCNN1A-218ENST00000542436 SUPT6HQ7KZ85 1726 aaKnown RBP24.78■■□□□ 1.56
SCNN1A-218ENST00000542436 HNRNPMP52272 730 aaKnown RBP eCLIP24.78■■□□□ 1.56
SCNN1A-218ENST00000542436 TIAM1Q13009 1591 aa24.78■■□□□ 1.56
SCNN1A-218ENST00000542436 PLXNC1O60486 1568 aa24.75■■□□□ 1.55
SCNN1A-218ENST00000542436 DMRT2Q9Y5R5 561 aa24.74■■□□□ 1.55
SCNN1A-218ENST00000542436 STRCQ7RTU9 1775 aa24.74■■□□□ 1.55
SCNN1A-218ENST00000542436 ADGBQ8N7X0 1667 aa24.73■■□□□ 1.55
SCNN1A-218ENST00000542436 A2MP01023 1474 aa24.72■■□□□ 1.55
SCNN1A-218ENST00000542436 NPATQ14207 1427 aa24.69■■□□□ 1.54
SCNN1A-218ENST00000542436 CERKQ8TCT0 537 aa24.68■■□□□ 1.54
SCNN1A-218ENST00000542436 CLTCQ00610 1675 aaKnown RBP24.68■■□□□ 1.54
SCNN1A-218ENST00000542436 MBD5Q9P267 1494 aa24.64■■□□□ 1.54
SCNN1A-218ENST00000542436 RTEL1-TNFRSF6BF6WH68 1400 aa24.63■■□□□ 1.53
SCNN1A-218ENST00000542436 ZMYM3Q14202 1370 aa24.63■■□□□ 1.53
SCNN1A-218ENST00000542436 NCOA2Q15596 1464 aa24.62■■□□□ 1.53
SCNN1A-218ENST00000542436 ZNF644Q9H582 1327 aaPredicted RBP24.61■■□□□ 1.53
SCNN1A-218ENST00000542436 PTPRTO14522 1441 aa24.61■■□□□ 1.53
SCNN1A-218ENST00000542436 CCDC141Q6ZP82 1450 aa24.59■■□□□ 1.53
SCNN1A-218ENST00000542436 PPP6R1Q9UPN7 881 aa24.59■■□□□ 1.53
SCNN1A-218ENST00000542436 CAMSAP2Q08AD1 1489 aa24.58■■□□□ 1.53
SCNN1A-218ENST00000542436 MYO3AQ8NEV4 1616 aa24.58■■□□□ 1.53
SCNN1A-218ENST00000542436 GGT6Q6P531 493 aa24.58■■□□□ 1.53
SCNN1A-218ENST00000542436 ZNF142P52746 1687 aaPredicted RBP24.58■■□□□ 1.53
SCNN1A-218ENST00000542436 NCOA1Q15788 1441 aa24.58■■□□□ 1.53
SCNN1A-218ENST00000542436 VPS8Q8N3P4 1428 aa24.56■■□□□ 1.52
SCNN1A-218ENST00000542436 CAMSAP1Q5T5Y3 1602 aa24.56■■□□□ 1.52
SCNN1A-218ENST00000542436 RSPH4AQ5TD94 716 aa24.55■■□□□ 1.52
SCNN1A-218ENST00000542436 DHX29Q7Z478 1369 aaKnown RBP24.54■■□□□ 1.52
SCNN1A-218ENST00000542436 ARHGEF5Q12774 1597 aa24.52■■□□□ 1.52
SCNN1A-218ENST00000542436 CEP170BQ9Y4F5 1589 aaPredicted RBP24.52■■□□□ 1.52
SCNN1A-218ENST00000542436 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
SCNN1A-218ENST00000542436 FAM135AQ9P2D6 1515 aa24.51■■□□□ 1.51
SCNN1A-218ENST00000542436 LRRC9Q6ZRR7 1453 aa24.51■■□□□ 1.51
SCNN1A-218ENST00000542436 PLA2R1Q13018 1463 aa24.48■■□□□ 1.51
SCNN1A-218ENST00000542436 MAP3K1Q13233 1512 aa24.46■■□□□ 1.51
SCNN1A-218ENST00000542436 KDM5DQ9BY66 1539 aa24.46■■□□□ 1.51
SCNN1A-218ENST00000542436 LTBP4Q8N2S1 1624 aa24.44■■□□□ 1.5
SCNN1A-218ENST00000542436 KIF3BO15066 747 aa24.44■■□□□ 1.5
SCNN1A-218ENST00000542436 TSPY4P0CV99 314 aa24.44■■□□□ 1.5
SCNN1A-218ENST00000542436 TSPY10P0CW01 314 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms