RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 KIF14Q15058 1648 aa10.03□□□□□ -0.8
VEGFB-203ENST00000541681 ADAMTSL3P82987 1691 aa10.02□□□□□ -0.8
VEGFB-203ENST00000541681 RIMS1Q86UR5 1692 aaKnown RBP10.02□□□□□ -0.8
VEGFB-203ENST00000541681 PCF11O94913 1555 aaKnown RBP10.02□□□□□ -0.81
VEGFB-203ENST00000541681 ZFYVE16Q7Z3T8 1539 aa10.02□□□□□ -0.81
VEGFB-203ENST00000541681 LRRIQ1Q96JM4 1722 aa10.02□□□□□ -0.81
VEGFB-203ENST00000541681 PLPPR3Q6T4P5 718 aa10.01□□□□□ -0.81
VEGFB-203ENST00000541681 PTPRMP28827 1452 aa10□□□□□ -0.81
VEGFB-203ENST00000541681 ARHGAP5Q13017 1502 aa9.99□□□□□ -0.81
VEGFB-203ENST00000541681 ZMYM4Q5VZL5 1548 aa9.99□□□□□ -0.81
VEGFB-203ENST00000541681 ZEB1P37275 1124 aaPredicted RBP9.99□□□□□ -0.81
VEGFB-203ENST00000541681 YEATS2Q9ULM3 1422 aa9.99□□□□□ -0.81
VEGFB-203ENST00000541681 TIAM1Q13009 1591 aa9.98□□□□□ -0.81
VEGFB-203ENST00000541681 SIGLEC1Q9BZZ2 1709 aa9.98□□□□□ -0.81
VEGFB-203ENST00000541681 POGZQ7Z3K3 1410 aa9.98□□□□□ -0.81
VEGFB-203ENST00000541681 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
VEGFB-203ENST00000541681 PLCH2O75038 1416 aa9.97□□□□□ -0.81
VEGFB-203ENST00000541681 TROQ12816 1431 aaPredicted RBP9.97□□□□□ -0.81
VEGFB-203ENST00000541681 SCAPERQ9BY12 1400 aa9.97□□□□□ -0.81
VEGFB-203ENST00000541681 FER1L4A9Z1Z3 1794 aa9.96□□□□□ -0.81
VEGFB-203ENST00000541681 MLECQ14165 292 aa9.96□□□□□ -0.82
VEGFB-203ENST00000541681 MYT1LQ9UL68 1186 aa9.96□□□□□ -0.82
VEGFB-203ENST00000541681 CCDC18Q5T9S5 1454 aa9.95□□□□□ -0.82
VEGFB-203ENST00000541681 FYCO1Q9BQS8 1478 aa9.95□□□□□ -0.82
VEGFB-203ENST00000541681 PREX2Q70Z35 1606 aa9.94□□□□□ -0.82
VEGFB-203ENST00000541681 ILDR1Q86SU0 546 aaPredicted RBP9.94□□□□□ -0.82
VEGFB-203ENST00000541681 MAGI2Q86UL8 1455 aa9.93□□□□□ -0.82
VEGFB-203ENST00000541681 CASKIN1Q8WXD9 1431 aa9.93□□□□□ -0.82
VEGFB-203ENST00000541681 EFCAB2Q5VUJ9 269 aa9.93□□□□□ -0.82
VEGFB-203ENST00000541681 CDC42BPBQ9Y5S2 1711 aa9.93□□□□□ -0.82
VEGFB-203ENST00000541681 ZNF518AQ6AHZ1 1483 aa9.92□□□□□ -0.82
VEGFB-203ENST00000541681 C9orf84Q5VXU9 1444 aa9.92□□□□□ -0.82
VEGFB-203ENST00000541681 ITSN2Q9NZM3 1697 aa9.91□□□□□ -0.82
VEGFB-203ENST00000541681 KANK4Q5T7N3 995 aaPredicted RBP9.91□□□□□ -0.82
VEGFB-203ENST00000541681 ABCC1P33527 1531 aa9.91□□□□□ -0.82
VEGFB-203ENST00000541681 LRRC9Q6ZRR7 1453 aa9.91□□□□□ -0.82
VEGFB-203ENST00000541681 LMTK3Q96Q04 1460 aa9.91□□□□□ -0.82
VEGFB-203ENST00000541681 CDC42BPAQ5VT25 1732 aa9.9□□□□□ -0.82
VEGFB-203ENST00000541681 KDM5CP41229 1560 aa9.9□□□□□ -0.82
VEGFB-203ENST00000541681 RRBP1Q9P2E9 1410 aaKnown RBP9.9□□□□□ -0.83
VEGFB-203ENST00000541681 ABCA6Q8N139 1617 aa9.89□□□□□ -0.83
VEGFB-203ENST00000541681 DIP2CQ9Y2E4 1556 aa9.89□□□□□ -0.83
VEGFB-203ENST00000541681 ATP10AO60312 1499 aa9.89□□□□□ -0.83
VEGFB-203ENST00000541681 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
VEGFB-203ENST00000541681 HSPA2P54652 639 aa9.87□□□□□ -0.83
VEGFB-203ENST00000541681 AFAP1Q8N556 730 aa9.87□□□□□ -0.83
VEGFB-203ENST00000541681 ZNF777Q9ULD5 760 aaPredicted RBP9.87□□□□□ -0.83
VEGFB-203ENST00000541681 SYCP2Q9BX26 1530 aa9.87□□□□□ -0.83
VEGFB-203ENST00000541681 TRAPPC8Q9Y2L5 1435 aa9.86□□□□□ -0.83
VEGFB-203ENST00000541681 SUPT6HQ7KZ85 1726 aaKnown RBP9.85□□□□□ -0.83
VEGFB-203ENST00000541681 SAMD9LQ8IVG5 1584 aa9.85□□□□□ -0.83
VEGFB-203ENST00000541681 PREX1Q8TCU6 1659 aa9.85□□□□□ -0.83
VEGFB-203ENST00000541681 KIDINS220Q9ULH0 1771 aa9.83□□□□□ -0.84
VEGFB-203ENST00000541681 CEBPAP49715 358 aaPredicted RBP9.83□□□□□ -0.84
VEGFB-203ENST00000541681 MTUS2Q5JR59 1369 aa9.83□□□□□ -0.84
VEGFB-203ENST00000541681 REREQ9P2R6 1566 aa9.83□□□□□ -0.84
VEGFB-203ENST00000541681 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
VEGFB-203ENST00000541681 ESF1Q9H501 851 aaKnown RBP9.82□□□□□ -0.84
VEGFB-203ENST00000541681 CCNB3Q8WWL7 1395 aa9.82□□□□□ -0.84
VEGFB-203ENST00000541681 MLH3Q9UHC1 1453 aa9.82□□□□□ -0.84
VEGFB-203ENST00000541681 C3P01024 1663 aa9.82□□□□□ -0.84
VEGFB-203ENST00000541681 EHBP1L1Q8N3D4 1523 aa9.82□□□□□ -0.84
VEGFB-203ENST00000541681 GPATCH8Q9UKJ3 1502 aaKnown RBP9.81□□□□□ -0.84
VEGFB-203ENST00000541681 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.8□□□□□ -0.84
VEGFB-203ENST00000541681 ATP7AQ04656 1500 aa9.8□□□□□ -0.84
VEGFB-203ENST00000541681 SPAG9O60271 1321 aaKnown RBP9.8□□□□□ -0.84
VEGFB-203ENST00000541681 INO80Q9ULG1 1556 aaPredicted RBP9.8□□□□□ -0.84
VEGFB-203ENST00000541681 CFDP1Q9UEE9 299 aaPredicted RBP9.79□□□□□ -0.84
VEGFB-203ENST00000541681 UHRF1BP1Q6BDS2 1440 aa9.79□□□□□ -0.84
VEGFB-203ENST00000541681 AGLP35573 1532 aa9.78□□□□□ -0.84
VEGFB-203ENST00000541681 HNRNPMP52272 730 aaKnown RBP eCLIP9.78□□□□□ -0.84
VEGFB-203ENST00000541681 PLEKHH2Q8IVE3 1493 aa9.78□□□□□ -0.84
VEGFB-203ENST00000541681 CLTCQ00610 1675 aaKnown RBP9.77□□□□□ -0.84
VEGFB-203ENST00000541681 FBXO41Q8TF61 875 aa9.77□□□□□ -0.85
VEGFB-203ENST00000541681 ADGBQ8N7X0 1667 aa9.75□□□□□ -0.85
VEGFB-203ENST00000541681 A2MP01023 1474 aa9.75□□□□□ -0.85
VEGFB-203ENST00000541681 CNTLNQ9NXG0 1405 aa9.74□□□□□ -0.85
VEGFB-203ENST00000541681 MROH2AA6NES4 1674 aa9.74□□□□□ -0.85
VEGFB-203ENST00000541681 NCOA2Q15596 1464 aa9.74□□□□□ -0.85
VEGFB-203ENST00000541681 STRCQ7RTU9 1775 aa9.74□□□□□ -0.85
VEGFB-203ENST00000541681 PLXNC1O60486 1568 aa9.74□□□□□ -0.85
VEGFB-203ENST00000541681 ZNF644Q9H582 1327 aaPredicted RBP9.74□□□□□ -0.85
VEGFB-203ENST00000541681 CLSPNQ9HAW4 1339 aa9.74□□□□□ -0.85
VEGFB-203ENST00000541681 FGD6Q6ZV73 1430 aa9.73□□□□□ -0.85
VEGFB-203ENST00000541681 KIAA1107Q9UPP5 1409 aa9.73□□□□□ -0.85
VEGFB-203ENST00000541681 CAMSAP2Q08AD1 1489 aa9.73□□□□□ -0.85
VEGFB-203ENST00000541681 PTPN23Q9H3S7 1636 aa9.73□□□□□ -0.85
VEGFB-203ENST00000541681 MYOM3Q5VTT5 1437 aa9.73□□□□□ -0.85
VEGFB-203ENST00000541681 MYO3AQ8NEV4 1616 aa9.72□□□□□ -0.85
VEGFB-203ENST00000541681 GGT6Q6P531 493 aa9.71□□□□□ -0.86
VEGFB-203ENST00000541681 SETD1BQ9UPS6 1966 aaKnown RBP9.71□□□□□ -0.86
VEGFB-203ENST00000541681 CCDC141Q6ZP82 1450 aa9.71□□□□□ -0.86
VEGFB-203ENST00000541681 CERKQ8TCT0 537 aa9.7□□□□□ -0.86
VEGFB-203ENST00000541681 CAMSAP1Q5T5Y3 1602 aa9.7□□□□□ -0.86
VEGFB-203ENST00000541681 TCOF1Q13428 1488 aaKnown RBP9.69□□□□□ -0.86
VEGFB-203ENST00000541681 MIA2Q96PC5 1412 aa9.69□□□□□ -0.86
VEGFB-203ENST00000541681 SETD5Q9C0A6 1442 aa9.69□□□□□ -0.86
VEGFB-203ENST00000541681 MBD5Q9P267 1494 aa9.69□□□□□ -0.86
VEGFB-203ENST00000541681 ZNF142P52746 1687 aaPredicted RBP9.68□□□□□ -0.86
VEGFB-203ENST00000541681 NPATQ14207 1427 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms