RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 RYDENQ9NUL5 291 aaKnown RBP13.23□□□□□ -0.29
SUDS3-202ENST00000541280 DOK7Q18PE1 504 aa13.21□□□□□ -0.29
SUDS3-202ENST00000541280 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
SUDS3-202ENST00000541280 C2orf72A6NCS6 295 aa13.15□□□□□ -0.3
SUDS3-202ENST00000541280 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
SUDS3-202ENST00000541280 ZSWIM6Q9HCJ5 1215 aa13.15□□□□□ -0.3
SUDS3-202ENST00000541280 HOXB1P14653 301 aaPredicted RBP13.14□□□□□ -0.31
SUDS3-202ENST00000541280 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
SUDS3-202ENST00000541280 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
SUDS3-202ENST00000541280 GTPBP6O43824 516 aaPredicted RBP13.12□□□□□ -0.31
SUDS3-202ENST00000541280 MARVELD3Q96A59 401 aa13.12□□□□□ -0.31
SUDS3-202ENST00000541280 TMC2Q8TDI7 906 aa13.1□□□□□ -0.31
SUDS3-202ENST00000541280 EMP3P54852 163 aa13.09□□□□□ -0.31
SUDS3-202ENST00000541280 GPR153Q6NV75 609 aa13.07□□□□□ -0.32
SUDS3-202ENST00000541280 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
SUDS3-202ENST00000541280 SLC34A2O95436 690 aa13.05□□□□□ -0.32
SUDS3-202ENST00000541280 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
SUDS3-202ENST00000541280 FOXK1P85037 733 aa13.02□□□□□ -0.33
SUDS3-202ENST00000541280 BBXQ8WY36 941 aaPredicted RBP13.02□□□□□ -0.33
SUDS3-202ENST00000541280 HS3ST6Q96QI5 342 aa13.01□□□□□ -0.33
SUDS3-202ENST00000541280 POTEB3A0JP26 581 aa13□□□□□ -0.33
SUDS3-202ENST00000541280 POTEBQ6S5H4 581 aa13□□□□□ -0.33
SUDS3-202ENST00000541280 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
SUDS3-202ENST00000541280 CRISPLD2Q9H0B8 497 aa12.99□□□□□ -0.33
SUDS3-202ENST00000541280 ARSIQ5FYB1 569 aa12.96□□□□□ -0.33
SUDS3-202ENST00000541280 DSG2Q14126 1118 aa12.95□□□□□ -0.34
SUDS3-202ENST00000541280 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
SUDS3-202ENST00000541280 ERBB3P21860 1342 aa12.93□□□□□ -0.34
SUDS3-202ENST00000541280 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
SUDS3-202ENST00000541280 PCDHGA4Q9Y5G9 962 aa12.93□□□□□ -0.34
SUDS3-202ENST00000541280 PTCD2Q8WV60 388 aaKnown RBP12.92□□□□□ -0.34
SUDS3-202ENST00000541280 PDE4AP27815 886 aa12.9□□□□□ -0.34
SUDS3-202ENST00000541280 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
SUDS3-202ENST00000541280 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
SUDS3-202ENST00000541280 KRTAP3-3Q9BYR6 98 aa12.88□□□□□ -0.35
SUDS3-202ENST00000541280 KRTAP3-2Q9BYR7 98 aa12.88□□□□□ -0.35
SUDS3-202ENST00000541280 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
SUDS3-202ENST00000541280 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
SUDS3-202ENST00000541280 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
SUDS3-202ENST00000541280 MFSD10Q14728 455 aa12.86□□□□□ -0.35
SUDS3-202ENST00000541280 PPP1R15BQ5SWA1 713 aa12.86□□□□□ -0.35
SUDS3-202ENST00000541280 NUDT7P0C024 238 aa12.85□□□□□ -0.35
SUDS3-202ENST00000541280 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.85□□□□□ -0.35
SUDS3-202ENST00000541280 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
SUDS3-202ENST00000541280 CADPS2Q86UW7 1296 aa12.83□□□□□ -0.36
SUDS3-202ENST00000541280 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
SUDS3-202ENST00000541280 OXER1Q8TDS5 423 aa12.81□□□□□ -0.36
SUDS3-202ENST00000541280 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
SUDS3-202ENST00000541280 LARP6Q9BRS8 491 aaKnown RBP12.8□□□□□ -0.36
SUDS3-202ENST00000541280 TBC1D12O60347 775 aa12.79□□□□□ -0.36
SUDS3-202ENST00000541280 LHX6Q9UPM6 363 aa12.79□□□□□ -0.36
SUDS3-202ENST00000541280 SPNS2Q8IVW8 549 aa12.77□□□□□ -0.37
SUDS3-202ENST00000541280 PSDA5PKW4 1024 aaPredicted RBP12.75□□□□□ -0.37
SUDS3-202ENST00000541280 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
SUDS3-202ENST00000541280 PBX2P40425 430 aa12.7□□□□□ -0.38
SUDS3-202ENST00000541280 UPF1Q92900 1129 aaKnown RBP eCLIP12.7□□□□□ -0.38
SUDS3-202ENST00000541280 CAMK2BQ13554 666 aa12.69□□□□□ -0.38
SUDS3-202ENST00000541280 MMRN1Q13201 1228 aa12.67□□□□□ -0.38
SUDS3-202ENST00000541280 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
SUDS3-202ENST00000541280 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
SUDS3-202ENST00000541280 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
SUDS3-202ENST00000541280 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
SUDS3-202ENST00000541280 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
SUDS3-202ENST00000541280 EVI5O60447 810 aa12.61□□□□□ -0.39
SUDS3-202ENST00000541280 LSM11P83369 360 aaKnown RBP eCLIP12.61□□□□□ -0.39
SUDS3-202ENST00000541280 ARHGAP33O14559 1287 aa12.59□□□□□ -0.39
SUDS3-202ENST00000541280 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
SUDS3-202ENST00000541280 PTGER2P43116 358 aa12.58□□□□□ -0.4
SUDS3-202ENST00000541280 FOSBP53539 338 aa12.57□□□□□ -0.4
SUDS3-202ENST00000541280 JPH4Q96JJ6 628 aa12.57□□□□□ -0.4
SUDS3-202ENST00000541280 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
SUDS3-202ENST00000541280 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
SUDS3-202ENST00000541280 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
SUDS3-202ENST00000541280 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
SUDS3-202ENST00000541280 ARIH1Q9Y4X5 557 aaPredicted RBP12.51□□□□□ -0.41
SUDS3-202ENST00000541280 TK2O00142 265 aa12.5□□□□□ -0.41
SUDS3-202ENST00000541280 DPYSL4O14531 572 aa12.5□□□□□ -0.41
SUDS3-202ENST00000541280 PSEN2P49810 448 aa12.48□□□□□ -0.41
SUDS3-202ENST00000541280 E2F4Q16254 413 aa12.48□□□□□ -0.41
SUDS3-202ENST00000541280 DMRTA1Q5VZB9 504 aa12.48□□□□□ -0.41
SUDS3-202ENST00000541280 MYT1LQ9UL68 1186 aa12.48□□□□□ -0.41
SUDS3-202ENST00000541280 ADGRD1Q6QNK2 874 aa12.47□□□□□ -0.41
SUDS3-202ENST00000541280 ZDHHC16Q969W1 377 aa12.47□□□□□ -0.41
SUDS3-202ENST00000541280 PDIA6Q15084 440 aa12.46□□□□□ -0.41
SUDS3-202ENST00000541280 RNF166Q96A37 237 aaPredicted RBP12.46□□□□□ -0.41
SUDS3-202ENST00000541280 KCNH8Q96L42 1107 aa12.46□□□□□ -0.41
SUDS3-202ENST00000541280 PCDHGA10Q9Y5H3 936 aa12.46□□□□□ -0.41
SUDS3-202ENST00000541280 PHF14O94880 888 aa12.45□□□□□ -0.42
SUDS3-202ENST00000541280 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
SUDS3-202ENST00000541280 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
SUDS3-202ENST00000541280 WDR70Q9NW82 654 aa12.45□□□□□ -0.42
SUDS3-202ENST00000541280 SLC4A5Q9BY07 1137 aa12.44□□□□□ -0.42
SUDS3-202ENST00000541280 HRO43593 1189 aa12.43□□□□□ -0.42
SUDS3-202ENST00000541280 PTPREP23469 700 aa12.43□□□□□ -0.42
SUDS3-202ENST00000541280 ADAM33Q9BZ11 813 aa12.43□□□□□ -0.42
SUDS3-202ENST00000541280 SPDYE16A6NNV3 312 aaPredicted RBP12.42□□□□□ -0.42
SUDS3-202ENST00000541280 FBXW7Q969H0 707 aa12.42□□□□□ -0.42
SUDS3-202ENST00000541280 TYW1BQ6NUM6 668 aa12.41□□□□□ -0.42
SUDS3-202ENST00000541280 EPAS1Q99814 870 aa12.4□□□□□ -0.42
SUDS3-202ENST00000541280 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms